Cow genome map


           Conread name:
           Ss1.1-rpigcf0_013379.5
        

               Conread position:
               19-210
               

               Cow position:
               chr17:2805902-2806094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               35, 20
               

               Conread position:
               19-231
               

               Cow position:
               chr17:21653310-21653098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               76, 124
               

               Conread position:
               37-200
               

               Cow position:
               chr17:31602405-31602565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               53-196
               

               Cow position:
               chr17:29040469-29040328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               67-225
               

               Cow position:
               chr17:44534804-44534963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               95-225
               

               Cow position:
               chr17:25743036-25742906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               95-233
               

               Cow position:
               chr17:3446756-3446892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               95-293
               

               Cow position:
               chr17:31831728-31831929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               132, 145
               

               Conread position:
               98-294
               

               Cow position:
               chr17:44534038-44533837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               8, 162
               

               Conread position:
               102-216
               

               Cow position:
               chr17:11140459-11140345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               89
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               102-266
               

               Cow position:
               chr17:8446809-8446644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               125, 98
               

               Conread position:
               105-214
               

               Cow position:
               chr17:10199466-10199575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.