Cow genome map
| Conread name: | Ss1.1-rpigcf0_013379.5 |
| Conread position: | 19-182 |
| Cow position: | chr18:35514215-35514051 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 26, 94 |
| Conread position: | 25-225 |
| Cow position: | chr18:16580291-16580490 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 164 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 49-294 |
| Cow position: | chr18:44763448-44763688 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 45, 125 |
| Conread position: | 53-196 |
| Cow position: | chr18:51786312-51786169 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 53-198 |
| Cow position: | chr18:51809379-51809233 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 95-205 |
| Cow position: | chr18:53967559-53967669 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 95-223 |
| Cow position: | chr18:40056070-40055942 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 95-225 |
| Cow position: | chr18:13702916-13703046 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 97 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 95-225 |
| Cow position: | chr18:15808671-15808801 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 95-225 |
| Cow position: | chr18:16405372-16405502 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 95-225 |
| Cow position: | chr18:41424063-41423933 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 95-240 |
| Cow position: | chr18:16359877-16360025 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 95-295 |
| Cow position: | chr18:4172800-4172597 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 123, 145 |
| Conread position: | 98-216 |
| Cow position: | chr18:42816818-42816699 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 104-216 |
| Cow position: | chr18:47114466-47114355 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 89 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 105-216 |
| Cow position: | chr18:23314144-23314032 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 89 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
Show alignments to all cow chromosomes.