Cow genome map


           Conread name:
           Ss1.1-rpigcf0_013379.5
        

               Conread position:
               19-166
               

               Cow position:
               chr3:42076172-42076321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               19-216
               

               Cow position:
               chr3:61487234-61487430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               19-225
               

               Cow position:
               chr3:67824838-67825044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               162
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               20-187
               

               Cow position:
               chr3:78202061-78202229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               25, 21
               

               Conread position:
               46-218
               

               Cow position:
               chr3:25186951-25186785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               92-198
               

               Cow position:
               chr3:34210909-34210802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               87
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               92-216
               

               Cow position:
               chr3:67818142-67818266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-225
               

               Cow position:
               chr3:52399952-52400083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               95-221
               

               Cow position:
               chr3:30383557-30383682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               95-225
               

               Cow position:
               chr3:5449177-5449046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               100-225
               

               Cow position:
               chr3:23429831-23429705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               102-225
               

               Cow position:
               chr3:25576709-25576832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               96
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.