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Cow genome map

           
Conread name:
           
Ss1.1-rpigcf0_013818.5
        

               
Conread position:
               
4-250
               

               
Cow position:
               
chr14:20736396-20736635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
119, 22
               

               
Conread position:
               
8-434
               

               
Cow position:
               
chr14:15931658-15932091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
32, 68
               

               
Conread position:
               
11-508
               

               
Cow position:
               
chr14:13385156-13385663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 17
               

               
Conread position:
               
12-294
               

               
Cow position:
               
chr14:43868090-43868377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
9, 203
               

               
Conread position:
               
18-510
               

               
Cow position:
               
chr14:46074383-46074878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
11, 34
               

               
Conread position:
               
19-326
               

               
Cow position:
               
chr14:23962650-23962951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
68, 28
               

               
Conread position:
               
22-299
               

               
Cow position:
               
chr14:27999238-27998963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
40, 23
               

               
Conread position:
               
22-510
               

               
Cow position:
               
chr14:41210660-41211149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 25
               

               
Conread position:
               
27-497
               

               
Cow position:
               
chr14:17899285-17899763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 26
               

               
Conread position:
               
34-482
               

               
Cow position:
               
chr14:13845798-13846250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 105
               

               
Conread position:
               
37-510
               

               
Cow position:
               
chr14:38920770-38921229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 34
               

               
Conread position:
               
39-227
               

               
Cow position:
               
chr14:31342018-31342213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
40-290
               

               
Cow position:
               
chr14:9307878-9308129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
10, 62
               

               
Conread position:
               
48-232
               

               
Cow position:
               
chr14:35421267-35421076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
28, 116
               

               
Conread position:
               
49-459
               

               
Cow position:
               
chr14:20110902-20110479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 108
               

               
Conread position:
               
54-338
               

               
Cow position:
               
chr14:49487793-49488072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
190, 95
               

               
Conread position:
               
54-398
               

               
Cow position:
               
chr14:49817859-49817521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
26, 90
               

               
Conread position:
               
54-446
               

               
Cow position:
               
chr14:20826319-20826698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 100
               

               
Conread position:
               
55-275
               

               
Cow position:
               
chr14:28401638-28401856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
68, 16
               

               
Conread position:
               
55-281
               

               
Cow position:
               
chr14:26918823-26919052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
71, 192
               

               
Conread position:
               
55-337
               

               
Cow position:
               
chr14:7198321-7198612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
26, 243
               

               
Conread position:
               
55-382
               

               
Cow position:
               
chr14:23424097-23424415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
68, 20
               

               
Conread position:
               
55-407
               

               
Cow position:
               
chr14:33457217-33456858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 110
               

               
Conread position:
               
55-413
               

               
Cow position:
               
chr14:16550166-16549816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
17, 43
               

               
Conread position:
               
55-427
               

               
Cow position:
               
chr14:41966055-41966442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
69, 268
               

               
Conread position:
               
55-501
               

               
Cow position:
               
chr14:42155137-42154678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 87
               

               
Conread position:
               
55-510
               

               
Cow position:
               
chr14:1715558-1716026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
71, 178
               

               
Conread position:
               
55-510
               

               
Cow position:
               
chr14:40461406-40461867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
93, 73
               

               
Conread position:
               
55-510
               

               
Cow position:
               
chr14:41472145-41471678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
68, 18
               

               
Conread position:
               
55-540
               

               
Cow position:
               
chr14:12244555-12244061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 90
               

               
Conread position:
               
56-486
               

               
Cow position:
               
chr14:49824783-49824360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
28, 40
               

               
Conread position:
               
57-278
               

               
Cow position:
               
chr14:5959160-5958935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
66, 16
               

               
Conread position:
               
57-365
               

               
Cow position:
               
chr14:12635046-12634748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
27, 65
               

               
Conread position:
               
58-216
               

               
Cow position:
               
chr14:16593214-16593372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
66, 15
               

               
Conread position:
               
58-227
               

               
Cow position:
               
chr14:37236202-37236371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
26, 42
               

               
Conread position:
               
58-227
               

               
Cow position:
               
chr14:37504347-37504516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
64, 15
               

               
Conread position:
               
58-233
               

               
Cow position:
               
chr14:30023364-30023190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
65, 17
               

               
Conread position:
               
58-249
               

               
Cow position:
               
chr14:50325827-50326012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
26, 58
               

               
Conread position:
               
58-250
               

               
Cow position:
               
chr14:18270196-18270385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
64, 17
               

               
Conread position:
               
58-250
               

               
Cow position:
               
chr14:25284828-25285022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
25, 11
               

               
Conread position:
               
58-275
               

               
Cow position:
               
chr14:27364406-27364627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
21, 177
               

               
Conread position:
               
58-296
               

               
Cow position:
               
chr14:4848183-4848417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
66, 37
               

               
Conread position:
               
58-330
               

               
Cow position:
               
chr14:8923754-8923480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
68, 48
               

               
Conread position:
               
58-342
               

               
Cow position:
               
chr14:15428308-15428590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
18, 71
               

               
Conread position:
               
58-376
               

               
Cow position:
               
chr14:7036527-7036203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
66, 190
               

               
Conread position:
               
58-386
               

               
Cow position:
               
chr14:26222569-26222906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
65, 46
               

               
Conread position:
               
58-413
               

               
Cow position:
               
chr14:48838426-48838783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
53, 15
               

               
Conread position:
               
58-450
               

               
Cow position:
               
chr14:11513793-11513392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
54, 15
               

               
Conread position:
               
58-493
               

               
Cow position:
               
chr14:13042592-13043024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
65, 78
               

               
Conread position:
               
58-493
               

               
Cow position:
               
chr14:36289957-36289541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 25
               

               
Conread position:
               
58-505
               

               
Cow position:
               
chr14:10858273-10858718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 78
               

               
Conread position:
               
58-510
               

               
Cow position:
               
chr14:6600116-6599662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 21
               

               
Conread position:
               
58-510
               

               
Cow position:
               
chr14:25681755-25682237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
64, 250
               

               
Conread position:
               
58-510
               

               
Cow position:
               
chr14:40230799-40230345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 17
               

               
Conread position:
               
58-511
               

               
Cow position:
               
chr14:13006354-13006796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
23, 131
               

               
Conread position:
               
58-523
               

               
Cow position:
               
chr14:41749923-41749459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 83
               

               
Conread position:
               
58-537
               

               
Cow position:
               
chr14:24416726-24417204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 82
               

               
Conread position:
               
59-217
               

               
Cow position:
               
chr14:5044510-5044662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
64, 37
               

               
Conread position:
               
59-381
               

               
Cow position:
               
chr14:28784654-28784334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
37, 68
               

               
Conread position:
               
59-493
               

               
Cow position:
               
chr14:12961432-12961843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
64, 78
               

               
Conread position:
               
59-508
               

               
Cow position:
               
chr14:21357390-21357842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 94
               

               
Conread position:
               
61-310
               

               
Cow position:
               
chr14:28924000-28924250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
6, 236
               

               
Conread position:
               
63-227
               

               
Cow position:
               
chr14:7316632-7316795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
60, 10
               

               
Conread position:
               
63-233
               

               
Cow position:
               
chr14:50519339-50519172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
57, 36
               

               
Conread position:
               
63-294
               

               
Cow position:
               
chr14:25903370-25903599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
63, 89
               

               
Conread position:
               
63-300
               

               
Cow position:
               
chr14:10937508-10937753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
63-412
               

               
Cow position:
               
chr14:23080918-23080578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
7, 92
               

               
Conread position:
               
63-505
               

               
Cow position:
               
chr14:18309462-18309024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 81
               

               
Conread position:
               
63-508
               

               
Cow position:
               
chr14:33714836-33714398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 94
               

               
Conread position:
               
69-497
               

               
Cow position:
               
chr14:24981297-24981733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 50
               

               
Conread position:
               
69-507
               

               
Cow position:
               
chr14:35498650-35498212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
54, 44
               

               
Conread position:
               
69-510
               

               
Cow position:
               
chr14:3194704-3195143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
12, 26
               

               
Conread position:
               
70-300
               

               
Cow position:
               
chr14:10387503-10387733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
52, 103
               

               
Conread position:
               
70-326
               

               
Cow position:
               
chr14:39452055-39452307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
50, 173
               

               
Conread position:
               
70-326
               

               
Cow position:
               
chr14:44713261-44713515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
53, 235
               

               
Conread position:
               
70-377
               

               
Cow position:
               
chr14:27823277-27823585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
53, 29
               

               
Conread position:
               
70-492
               

               
Cow position:
               
chr14:20667160-20666746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
53, 72
               

               
Conread position:
               
70-537
               

               
Cow position:
               
chr14:20016865-20016387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 245
               

               
Conread position:
               
71-290
               

               
Cow position:
               
chr14:18301802-18302025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
52, 28
               

               
Conread position:
               
71-310
               

               
Cow position:
               
chr14:23419639-23419882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
71-324
               

               
Cow position:
               
chr14:25225578-25225828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
51, 24
               

               
Conread position:
               
71-346
               

               
Cow position:
               
chr14:1796042-1796312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
13, 46
               

               
Conread position:
               
71-363
               

               
Cow position:
               
chr14:1708813-1708518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
52, 248
               

               
Conread position:
               
71-407
               

               
Cow position:
               
chr14:45045442-45045788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
52, 112
               

               
Conread position:
               
71-515
               

               
Cow position:
               
chr14:6541881-6541423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 75
               

               
Conread position:
               
72-305
               

               
Cow position:
               
chr14:20466783-20467009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
51, 80
               

               
Conread position:
               
72-422
               

               
Cow position:
               
chr14:4877380-4877034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
105, 52
               

               
Conread position:
               
73-225
               

               
Cow position:
               
chr14:36559378-36559227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
50, 30
               

               
Conread position:
               
73-227
               

               
Cow position:
               
chr14:5668273-5668117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
73-232
               

               
Cow position:
               
chr14:20915133-20914971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
50, 72
               

               
Conread position:
               
73-233
               

               
Cow position:
               
chr14:32784270-32784108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
73-250
               

               
Cow position:
               
chr14:23465204-23465025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
73-250
               

               
Cow position:
               
chr14:41156872-41156700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
50, 27
               

               
Conread position:
               
73-260
               

               
Cow position:
               
chr14:24785507-24785692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
50, 61
               

               
Conread position:
               
73-290
               

               
Cow position:
               
chr14:11576917-11577132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
47, 79
               

               
Conread position:
               
73-297
               

               
Cow position:
               
chr14:10706726-10706945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
50, 68
               

               
Conread position:
               
73-381
               

               
Cow position:
               
chr14:22941892-22941565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
73-424
               

               
Cow position:
               
chr14:38747527-38747862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
49, 22
               

               
Conread position:
               
73-440
               

               
Cow position:
               
chr14:25986360-25986731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 245
               

               
Conread position:
               
73-508
               

               
Cow position:
               
chr14:6736020-6735576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 144
               

               
Conread position:
               
73-511
               

               
Cow position:
               
chr14:8848126-8848541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
342, 50
               

               
Conread position:
               
73-517
               

               
Cow position:
               
chr14:10078102-10078559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 327
               

               
Conread position:
               
73-521
               

               
Cow position:
               
chr14:14622320-14621880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 40
               

               
Conread position:
               
73-521
               

               
Cow position:
               
chr14:45677079-45677529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 88
               

               
Conread position:
               
73-533
               

               
Cow position:
               
chr14:33791041-33791505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 68
               

               
Conread position:
               
74-260
               

               
Cow position:
               
chr14:8083044-8083233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
10, 92
               

               
Conread position:
               
74-283
               

               
Cow position:
               
chr14:15470138-15469925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
10, 157
               

               
Conread position:
               
74-376
               

               
Cow position:
               
chr14:11056885-11056588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
49, 170
               

               
Conread position:
               
74-537
               

               
Cow position:
               
chr14:34200011-34199522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 135
               

               
Conread position:
               
75-326
               

               
Cow position:
               
chr14:48744365-48744612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
45, 77
               

               
Conread position:
               
76-224
               

               
Cow position:
               
chr14:24746307-24746464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
76-385
               

               
Cow position:
               
chr14:41302992-41302668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
47, 88
               

               
Conread position:
               
76-440
               

               
Cow position:
               
chr14:50362643-50363012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 38
               

               
Conread position:
               
76-492
               

               
Cow position:
               
chr14:39918885-39918489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
251, 43
               

               
Conread position:
               
76-509
               

               
Cow position:
               
chr14:19594284-19593849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 50
               

               
Conread position:
               
76-512
               

               
Cow position:
               
chr14:50589539-50589096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
143, 24
               

               
Conread position:
               
76-521
               

               
Cow position:
               
chr14:24236673-24237124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 93
               

               
Conread position:
               
76-533
               

               
Cow position:
               
chr14:39770370-39769912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 63
               

               
Conread position:
               
76-540
               

               
Cow position:
               
chr14:20640778-20640296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 81
               

               
Conread position:
               
77-362
               

               
Cow position:
               
chr14:40474414-40474699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
49, 155
               

               
Conread position:
               
77-468
               

               
Cow position:
               
chr14:16032862-16033257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
44, 22
               

               
Conread position:
               
77-510
               

               
Cow position:
               
chr14:21201969-21201538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
7, 121
               

               
Conread position:
               
78-510
               

               
Cow position:
               
chr14:17013372-17013800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
8, 131
               

               
Conread position:
               
80-412
               

               
Cow position:
               
chr14:26628671-26628337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
43, 226
               

               
Conread position:
               
80-504
               

               
Cow position:
               
chr14:47673023-47672597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 73
               

               
Conread position:
               
80-510
               

               
Cow position:
               
chr14:26115914-26116355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 156
               

               
Conread position:
               
81-497
               

               
Cow position:
               
chr14:12520448-12520040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 65
               

               
Conread position:
               
81-497
               

               
Cow position:
               
chr14:23712551-23712965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
42, 66
               

               
Conread position:
               
81-510
               

               
Cow position:
               
chr14:28987545-28987983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 168
               

               
Conread position:
               
83-214
               

               
Cow position:
               
chr14:10838721-10838848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
39, 63
               

               
Conread position:
               
83-218
               

               
Cow position:
               
chr14:12137875-12138009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
41, 16
               

               
Conread position:
               
83-220
               

               
Cow position:
               
chr14:12071669-12071530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
83-224
               

               
Cow position:
               
chr14:41871731-41871589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
40, 121
               

               
Conread position:
               
83-227
               

               
Cow position:
               
chr14:8027709-8027559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
83-227
               

               
Cow position:
               
chr14:8949509-8949651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
41, 69
               

               
Conread position:
               
83-227
               

               
Cow position:
               
chr14:10920710-10920562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
83-227
               

               
Cow position:
               
chr14:19772416-19772274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
41, 69
               

               
Conread position:
               
83-227
               

               
Cow position:
               
chr14:20513085-20513231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
83-227
               

               
Cow position:
               
chr14:22231050-22230907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
40, 73
               

               
Conread position:
               
83-227
               

               
Cow position:
               
chr14:29282610-29282756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
83-233
               

               
Cow position:
               
chr14:11280255-11280106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
83-233
               

               
Cow position:
               
chr14:27653019-27653171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
83-234
               

               
Cow position:
               
chr14:40952120-40952279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
83-247
               

               
Cow position:
               
chr14:20010650-20010484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
83-250
               

               
Cow position:
               
chr14:7357876-7358048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
83-264
               

               
Cow position:
               
chr14:14633063-14632877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
83-265
               

               
Cow position:
               
chr14:145653-145472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
21, 44
               

               
Conread position:
               
83-266
               

               
Cow position:
               
chr14:18412736-18412551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
83-275
               

               
Cow position:
               
chr14:7127718-7127907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
40, 67
               

               
Conread position:
               
83-298
               

               
Cow position:
               
chr14:29734502-29734292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
83-300
               

               
Cow position:
               
chr14:49940871-49941082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
40, 67
               

               
Conread position:
               
83-305
               

               
Cow position:
               
chr14:23078934-23078713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
40, 59
               

               
Conread position:
               
83-311
               

               
Cow position:
               
chr14:28694861-28694631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
83-316
               

               
Cow position:
               
chr14:45955145-45955369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
9, 144
               

               
Conread position:
               
83-320
               

               
Cow position:
               
chr14:21224501-21224733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
37, 56
               

               
Conread position:
               
83-322
               

               
Cow position:
               
chr14:6360251-6360498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
40, 226
               

               
Conread position:
               
83-323
               

               
Cow position:
               
chr14:28465360-28465122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
40, 171
               

               
Conread position:
               
83-325
               

               
Cow position:
               
chr14:25228005-25228236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
37, 57
               

               
Conread position:
               
83-327
               

               
Cow position:
               
chr14:47170492-47170254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
40, 66
               

               
Conread position:
               
83-330
               

               
Cow position:
               
chr14:23104138-23103893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
40, 67
               

               
Conread position:
               
83-330
               

               
Cow position:
               
chr14:29964875-29965120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
40, 123
               

               
Conread position:
               
83-330
               

               
Cow position:
               
chr14:36443159-36442914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
40, 70
               

               
Conread position:
               
83-330
               

               
Cow position:
               
chr14:45312654-45312895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
45, 71
               

               
Conread position:
               
83-334
               

               
Cow position:
               
chr14:11643388-11643149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
39, 56
               

               
Conread position:
               
83-341
               

               
Cow position:
               
chr14:48900028-48900289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
40, 15
               

               
Conread position:
               
83-372
               

               
Cow position:
               
chr14:11470292-11470000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
40, 90
               

               
Conread position:
               
83-375
               

               
Cow position:
               
chr14:42419421-42419124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
40, 16
               

               
Conread position:
               
83-376
               

               
Cow position:
               
chr14:35533182-35532884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
41, 16
               

               
Conread position:
               
83-376
               

               
Cow position:
               
chr14:40754386-40754092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
40, 63
               

               
Conread position:
               
83-382
               

               
Cow position:
               
chr14:23442884-23443176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
40, 48
               

               
Conread position:
               
83-391
               

               
Cow position:
               
chr14:35503221-35503529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 43
               

               
Conread position:
               
83-398
               

               
Cow position:
               
chr14:29590760-29590447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
37, 111
               

               
Conread position:
               
83-411
               

               
Cow position:
               
chr14:19321652-19321320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
40, 155
               

               
Conread position:
               
83-413
               

               
Cow position:
               
chr14:21933487-21933153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
40, 70
               

               
Conread position:
               
83-434
               

               
Cow position:
               
chr14:2975228-2974886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 73
               

               
Conread position:
               
83-439
               

               
Cow position:
               
chr14:27338196-27338557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
37, 173
               

               
Conread position:
               
83-440
               

               
Cow position:
               
chr14:25979128-25979478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
37, 86
               

               
Conread position:
               
83-443
               

               
Cow position:
               
chr14:29592858-29592505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
40, 136
               

               
Conread position:
               
83-449
               

               
Cow position:
               
chr14:25001890-25002256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
37, 77
               

               
Conread position:
               
83-452
               

               
Cow position:
               
chr14:7799775-7800138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
118, 20
               

               
Conread position:
               
83-464
               

               
Cow position:
               
chr14:27355252-27355649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
14, 56
               

               
Conread position:
               
83-476
               

               
Cow position:
               
chr14:24387309-24387709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
40, 16
               

               
Conread position:
               
83-494
               

               
Cow position:
               
chr14:40165287-40165697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 16
               

               
Conread position:
               
83-496
               

               
Cow position:
               
chr14:42246862-42247247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
40, 16
               

               
Conread position:
               
83-500
               

               
Cow position:
               
chr14:5630026-5630443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 63
               

               
Conread position:
               
83-504
               

               
Cow position:
               
chr14:8541349-8540930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 56
               

               
Conread position:
               
83-508
               

               
Cow position:
               
chr14:28378215-28378654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 32
               

               
Conread position:
               
83-508
               

               
Cow position:
               
chr14:36166798-36167223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
40, 118
               

               
Conread position:
               
83-508
               

               
Cow position:
               
chr14:42330204-42330644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 160
               

               
Conread position:
               
83-508
               

               
Cow position:
               
chr14:48426930-48427366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 76
               

               
Conread position:
               
83-510
               

               
Cow position:
               
chr14:17554634-17554192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
45, 37
               

               
Conread position:
               
83-510
               

               
Cow position:
               
chr14:26941363-26940931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
40, 56
               

               
Conread position:
               
83-510
               

               
Cow position:
               
chr14:27848037-27848492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 20
               

               
Conread position:
               
83-510
               

               
Cow position:
               
chr14:30760074-30760500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
41, 121
               

               
Conread position:
               
83-510
               

               
Cow position:
               
chr14:33247562-33247146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 40
               

               
Conread position:
               
83-510
               

               
Cow position:
               
chr14:35381447-35381880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 109
               

               
Conread position:
               
83-518
               

               
Cow position:
               
chr14:1803261-1802821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 30
               

               
Conread position:
               
83-518
               

               
Cow position:
               
chr14:5222427-5221987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 19
               

               
Conread position:
               
83-518
               

               
Cow position:
               
chr14:18345866-18345431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 54
               

               
Conread position:
               
83-519
               

               
Cow position:
               
chr14:45052296-45052738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 208
               

               
Conread position:
               
83-521
               

               
Cow position:
               
chr14:28304929-28304484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 100
               

               
Conread position:
               
83-521
               

               
Cow position:
               
chr14:35420904-35420451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 76
               

               
Conread position:
               
83-521
               

               
Cow position:
               
chr14:48496289-48495844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 129
               

               
Conread position:
               
83-533
               

               
Cow position:
               
chr14:4227365-4226882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 477
               

               
Conread position:
               
83-535
               

               
Cow position:
               
chr14:14466602-14466163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 155
               

               
Conread position:
               
83-538
               

               
Cow position:
               
chr14:18941430-18940983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 127
               

               
Conread position:
               
83-540
               

               
Cow position:
               
chr14:16237652-16237182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 38
               

               
Conread position:
               
84-265
               

               
Cow position:
               
chr14:41191239-41191056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
84-295
               

               
Cow position:
               
chr14:22916436-22916222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
9, 125
               

               
Conread position:
               
84-330
               

               
Cow position:
               
chr14:33229541-33229294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
39, 69
               

               
Conread position:
               
84-332
               

               
Cow position:
               
chr14:34775890-34775641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
39, 210
               

               
Conread position:
               
84-345
               

               
Cow position:
               
chr14:10693398-10693138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
39, 147
               

               
Conread position:
               
84-354
               

               
Cow position:
               
chr14:12073097-12072826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
39, 71
               

               
Conread position:
               
84-372
               

               
Cow position:
               
chr14:48772776-48773052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
243, 12
               

               
Conread position:
               
84-373
               

               
Cow position:
               
chr14:26655278-26654983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 162
               

               
Conread position:
               
84-381
               

               
Cow position:
               
chr14:30756700-30756999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
40, 148
               

               
Conread position:
               
84-476
               

               
Cow position:
               
chr14:1646325-1645931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 19
               

               
Conread position:
               
84-478
               

               
Cow position:
               
chr14:28115332-28114923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 101
               

               
Conread position:
               
84-487
               

               
Cow position:
               
chr14:8786678-8786280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
245, 39
               

               
Conread position:
               
84-496
               

               
Cow position:
               
chr14:48447306-48446881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
36, 75
               

               
Conread position:
               
84-497
               

               
Cow position:
               
chr14:10609538-10609969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 18
               

               
Conread position:
               
84-508
               

               
Cow position:
               
chr14:14327266-14326814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 225
               

               
Conread position:
               
84-510
               

               
Cow position:
               
chr14:19852077-19851628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 159
               

               
Conread position:
               
84-510
               

               
Cow position:
               
chr14:38144251-38143822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 212
               

               
Conread position:
               
84-521
               

               
Cow position:
               
chr14:39434395-39433958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 66
               

               
Conread position:
               
84-540
               

               
Cow position:
               
chr14:17755435-17755884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 37
               

               
Conread position:
               
84-540
               

               
Cow position:
               
chr14:31130518-31130064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 58
               

               
Conread position:
               
85-220
               

               
Cow position:
               
chr14:13516132-13515995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
85-232
               

               
Cow position:
               
chr14:21593142-21592997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
39, 62
               

               
Conread position:
               
85-283
               

               
Cow position:
               
chr14:14224425-14224625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
85-349
               

               
Cow position:
               
chr14:4282650-4282383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
39, 18
               

               
Conread position:
               
85-378
               

               
Cow position:
               
chr14:24527303-24527005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
37, 66
               

               
Conread position:
               
85-431
               

               
Cow position:
               
chr14:12342982-12342613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
38, 343
               

               
Conread position:
               
85-453
               

               
Cow position:
               
chr14:14949354-14948977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 54
               

               
Conread position:
               
85-486
               

               
Cow position:
               
chr14:11043634-11043222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 229
               

               
Conread position:
               
85-493
               

               
Cow position:
               
chr14:47609724-47609312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
37, 102
               

               
Conread position:
               
85-493
               

               
Cow position:
               
chr14:48689388-48689805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 37
               

               
Conread position:
               
85-497
               

               
Cow position:
               
chr14:32452111-32452535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 62
               

               
Conread position:
               
85-499
               

               
Cow position:
               
chr14:3868571-3868149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 275
               

               
Conread position:
               
85-505
               

               
Cow position:
               
chr14:20010454-20010024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 304
               

               
Conread position:
               
85-510
               

               
Cow position:
               
chr14:36437629-36437192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 228
               

               
Conread position:
               
85-513
               

               
Cow position:
               
chr14:2937501-2937942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
69, 41
               

               
Conread position:
               
85-539
               

               
Cow position:
               
chr14:11508378-11507921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
38, 219
               

               
Conread position:
               
85-540
               

               
Cow position:
               
chr14:12546695-12546264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
49, 17
               

               
Conread position:
               
86-299
               

               
Cow position:
               
chr14:18937292-18937077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
86-302
               

               
Cow position:
               
chr14:14812362-14812143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
86-333
               

               
Cow position:
               
chr14:33546498-33546248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
40, 219
               

               
Conread position:
               
86-345
               

               
Cow position:
               
chr14:39415019-39415279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
37, 221
               

               
Conread position:
               
86-369
               

               
Cow position:
               
chr14:28153884-28153601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
34, 67
               

               
Conread position:
               
86-499
               

               
Cow position:
               
chr14:37889720-37890130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
37, 71
               

               
Conread position:
               
86-510
               

               
Cow position:
               
chr14:6490842-6490412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 218
               

               
Conread position:
               
86-510
               

               
Cow position:
               
chr14:24921959-24922398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 70
               

               
Conread position:
               
86-510
               

               
Cow position:
               
chr14:37103068-37103495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 229
               

               
Conread position:
               
86-521
               

               
Cow position:
               
chr14:44742511-44742081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
34, 81
               

               
Conread position:
               
87-282
               

               
Cow position:
               
chr14:42422950-42423147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
87-308
               

               
Cow position:
               
chr14:26172535-26172312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
38, 202
               

               
Conread position:
               
87-326
               

               
Cow position:
               
chr14:12146619-12146380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
35, 93
               

               
Conread position:
               
87-377
               

               
Cow position:
               
chr14:20954544-20954839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
35, 75
               

               
Conread position:
               
87-390
               

               
Cow position:
               
chr14:40486781-40486488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
35, 197
               

               
Conread position:
               
87-400
               

               
Cow position:
               
chr14:12512029-12511726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
36, 61
               

               
Conread position:
               
87-401
               

               
Cow position:
               
chr14:33341613-33341934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
35, 92
               

               
Conread position:
               
87-433
               

               
Cow position:
               
chr14:47276839-47276494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
36, 218
               

               
Conread position:
               
87-440
               

               
Cow position:
               
chr14:11846359-11846712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
35, 140
               

               
Conread position:
               
87-440
               

               
Cow position:
               
chr14:15313420-15313768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
36, 247
               

               
Conread position:
               
87-467
               

               
Cow position:
               
chr14:27919873-27919489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
36, 79
               

               
Conread position:
               
87-504
               

               
Cow position:
               
chr14:11810698-11810284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
36, 86
               

               
Conread position:
               
87-504
               

               
Cow position:
               
chr14:26433387-26432955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
36, 91
               

               
Conread position:
               
87-510
               

               
Cow position:
               
chr14:8101659-8102070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 48
               

               
Conread position:
               
87-510
               

               
Cow position:
               
chr14:19851166-19850740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 115
               

               
Conread position:
               
87-510
               

               
Cow position:
               
chr14:26442484-26442046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 147
               

               
Conread position:
               
87-510
               

               
Cow position:
               
chr14:44237865-44237408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
87-510
               

               
Cow position:
               
chr14:48492937-48492493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 93
               

               
Conread position:
               
88-298
               

               
Cow position:
               
chr14:26825051-26825263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
88-309
               

               
Cow position:
               
chr14:27884878-27885101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
88-442
               

               
Cow position:
               
chr14:8946220-8945868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
35, 59
               

               
Conread position:
               
88-508
               

               
Cow position:
               
chr14:18485392-18484951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 74
               

               
Conread position:
               
88-510
               

               
Cow position:
               
chr14:20932485-20932910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
245, 38
               

               
Conread position:
               
88-540
               

               
Cow position:
               
chr14:41809792-41809327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 81
               

               
Conread position:
               
89-224
               

               
Cow position:
               
chr14:9052388-9052253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
91-224
               

               
Cow position:
               
chr14:21530210-21530075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
91-310
               

               
Cow position:
               
chr14:19592321-19592545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
91-324
               

               
Cow position:
               
chr14:17335486-17335249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
32, 74
               

               
Conread position:
               
91-326
               

               
Cow position:
               
chr14:15404560-15404797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
21, 90
               

               
Conread position:
               
91-501
               

               
Cow position:
               
chr14:22988901-22989317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 62
               

               
Conread position:
               
91-508
               

               
Cow position:
               
chr14:7290665-7291085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 106
               

               
Conread position:
               
91-510
               

               
Cow position:
               
chr14:49929880-49929443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
32, 74
               

               
Conread position:
               
93-349
               

               
Cow position:
               
chr14:40002111-40001853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
30, 20
               

               
Conread position:
               
93-354
               

               
Cow position:
               
chr14:11285447-11285705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
235, 143
               

               
Conread position:
               
96-285
               

               
Cow position:
               
chr14:35065557-35065748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
96-482
               

               
Cow position:
               
chr14:33300565-33300946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
21, 147
               

               
Conread position:
               
99-445
               

               
Cow position:
               
chr14:30606046-30605697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
27, 58
               

               
Conread position:
               
99-493
               

               
Cow position:
               
chr14:27076840-27077244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
25, 163
               

               
Conread position:
               
99-510
               

               
Cow position:
               
chr14:48740996-48740594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 70
               

               
Conread position:
               
99-517
               

               
Cow position:
               
chr14:41127780-41128192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 75
               

               
Conread position:
               
100-422
               

               
Cow position:
               
chr14:24607836-24608163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
26, 57
               

               
Conread position:
               
100-510
               

               
Cow position:
               
chr14:41479788-41479367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 49
               

               
Conread position:
               
103-438
               

               
Cow position:
               
chr14:46973316-46973651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
20, 51
               

               
Conread position:
               
103-501
               

               
Cow position:
               
chr14:7695141-7695533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
20, 135
               

               
Conread position:
               
103-510
               

               
Cow position:
               
chr14:27305027-27305448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
21, 70
               

               
Conread position:
               
103-519
               

               
Cow position:
               
chr14:18657727-18657299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 28
               

               
Conread position:
               
103-540
               

               
Cow position:
               
chr14:38548678-38549126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
16, 140
               

               
Conread position:
               
106-396
               

               
Cow position:
               
chr14:7421177-7420881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 192
               

               
Conread position:
               
106-414
               

               
Cow position:
               
chr14:4203216-4202904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
14, 36
               

               
Conread position:
               
106-456
               

               
Cow position:
               
chr14:37447587-37447240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
17, 36
               

               
Conread position:
               
109-497
               

               
Cow position:
               
chr14:38355067-38355462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
36, 130
               

               
Conread position:
               
109-508
               

               
Cow position:
               
chr14:37333578-37333981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
19, 99
               

               
Conread position:
               
110-519
               

               
Cow position:
               
chr14:26108512-26108941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
49, 99
               

               
Conread position:
               
111-521
               

               
Cow position:
               
chr14:28795556-28795982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 250
               

               
Conread position:
               
113-453
               

               
Cow position:
               
chr14:25111384-25111722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
7, 134
               

               
Conread position:
               
113-473
               

               
Cow position:
               
chr14:27592070-27591700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 15
               

               
Conread position:
               
115-540
               

               
Cow position:
               
chr14:43249481-43249909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 36
               

               
Conread position:
               
116-517
               

               
Cow position:
               
chr14:19618858-19618464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 5
               

               
Conread position:
               
120-509
               

               
Cow position:
               
chr14:30661891-30662278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
33, 19
               

               
Conread position:
               
121-234
               

               
Cow position:
               
chr14:13379731-13379620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
121-510
               

               
Cow position:
               
chr14:9110815-9110441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
311, 131
               

               
Conread position:
               
121-540
               

               
Cow position:
               
chr14:47584765-47584324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
98, 50
               

               
Conread position:
               
123-510
               

               
Cow position:
               
chr14:28091064-28090680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
210, 87
               

               
Conread position:
               
125-433
               

               
Cow position:
               
chr14:1978174-1977874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
76, 171
               

               
Conread position:
               
125-489
               

               
Cow position:
               
chr14:9539286-9538923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
158, 101
               

               
Conread position:
               
126-327
               

               
Cow position:
               
chr14:3943653-3943453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
8, 155
               

               
Conread position:
               
126-372
               

               
Cow position:
               
chr14:19951466-19951717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
126-503
               

               
Cow position:
               
chr14:21691375-21690996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
36, 15
               

               
Conread position:
               
126-515
               

               
Cow position:
               
chr14:23107223-23107623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
36, 15
               

               
Conread position:
               
128-521
               

               
Cow position:
               
chr14:15055087-15054682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
177, 12
               

               
Conread position:
               
129-540
               

               
Cow position:
               
chr14:22583058-22583463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 28
               

               
Conread position:
               
131-510
               

               
Cow position:
               
chr14:20712782-20712390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 81
               

               
Conread position:
               
132-234
               

               
Cow position:
               
chr14:4209412-4209514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
132-297
               

               
Cow position:
               
chr14:45577186-45577021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
132-372
               

               
Cow position:
               
chr14:42436931-42437173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
110, 102
               

               
Conread position:
               
132-381
               

               
Cow position:
               
chr14:18763528-18763288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
22, 66
               

               
Conread position:
               
132-444
               

               
Cow position:
               
chr14:33830210-33830515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 20
               

               
Conread position:
               
132-494
               

               
Cow position:
               
chr14:8749981-8750350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
22, 85
               

               
Conread position:
               
132-504
               

               
Cow position:
               
chr14:44257830-44258200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 25
               

               
Conread position:
               
132-510
               

               
Cow position:
               
chr14:26097785-26097396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
128, 20
               

               
Conread position:
               
132-510
               

               
Cow position:
               
chr14:45605006-45605381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
172, 23
               

               
Conread position:
               
132-518
               

               
Cow position:
               
chr14:38338227-38337851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
22, 30
               

               
Conread position:
               
132-521
               

               
Cow position:
               
chr14:34096659-34096290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
78, 104
               

               
Conread position:
               
132-537
               

               
Cow position:
               
chr14:43453282-43452860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
34, 13
               

               
Conread position:
               
133-433
               

               
Cow position:
               
chr14:19394268-19394568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
24, 81
               

               
Conread position:
               
133-475
               

               
Cow position:
               
chr14:28003874-28004237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
30, 130
               

               
Conread position:
               
133-508
               

               
Cow position:
               
chr14:4990909-4991281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 201
               

               
Conread position:
               
133-510
               

               
Cow position:
               
chr14:9901091-9901462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 75
               

               
Conread position:
               
133-510
               

               
Cow position:
               
chr14:37155785-37156160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
257, 38
               

               
Conread position:
               
133-512
               

               
Cow position:
               
chr14:39926119-39926485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 17
               

               
Conread position:
               
133-540
               

               
Cow position:
               
chr14:17238267-17238688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
20, 66
               

               
Conread position:
               
133-540
               

               
Cow position:
               
chr14:39618469-39618052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 0
               

               
Conread position:
               
134-508
               

               
Cow position:
               
chr14:37884008-37883629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 200
               

               
Conread position:
               
134-511
               

               
Cow position:
               
chr14:19206781-19207157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
250, 157
               

               
Conread position:
               
135-445
               

               
Cow position:
               
chr14:15825190-15825504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
177, 126
               

               
Conread position:
               
135-508
               

               
Cow position:
               
chr14:37131571-37131948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 49
               

               
Conread position:
               
137-382
               

               
Cow position:
               
chr14:32553395-32553152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
154, 125
               

               
Conread position:
               
137-496
               

               
Cow position:
               
chr14:44848457-44848106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
24, 12
               

               
Conread position:
               
137-497
               

               
Cow position:
               
chr14:19129417-19129790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
138-510
               

               
Cow position:
               
chr14:25779015-25779386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
295, 17
               

               
Conread position:
               
140-298
               

               
Cow position:
               
chr14:34399884-34399726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
140-330
               

               
Cow position:
               
chr14:34449057-34448865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
159, 0
               

               
Conread position:
               
140-510
               

               
Cow position:
               
chr14:14316801-14317158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
188, 95
               

               
Conread position:
               
140-521
               

               
Cow position:
               
chr14:33751450-33751817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
11, 86
               

               
Conread position:
               
141-357
               

               
Cow position:
               
chr14:34331411-34331194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
182, 0
               

               
Conread position:
               
141-501
               

               
Cow position:
               
chr14:15039698-15039356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
151, 121
               

               
Conread position:
               
141-510
               

               
Cow position:
               
chr14:20468180-20467821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
188, 143
               

               
Conread position:
               
142-510
               

               
Cow position:
               
chr14:19863518-19863149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 161
               

               
Conread position:
               
143-433
               

               
Cow position:
               
chr14:27275080-27275376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
98, 84
               

               
Conread position:
               
143-477
               

               
Cow position:
               
chr14:14979794-14979444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
73, 6
               

               
Conread position:
               
143-510
               

               
Cow position:
               
chr14:106650-106283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
185, 141
               

               
Conread position:
               
144-388
               

               
Cow position:
               
chr14:46997957-46998209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
185, 160
               

               
Conread position:
               
145-510
               

               
Cow position:
               
chr14:19188962-19189331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
49, 146
               

               
Conread position:
               
146-497
               

               
Cow position:
               
chr14:29632960-29632603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
160, 18
               

               
Conread position:
               
147-326
               

               
Cow position:
               
chr14:3498726-3498905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
147-424
               

               
Cow position:
               
chr14:40283539-40283819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
92, 120
               

               
Conread position:
               
147-452
               

               
Cow position:
               
chr14:26490821-26490512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 8
               

               
Conread position:
               
147-464
               

               
Cow position:
               
chr14:14417575-14417260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
18, 32
               

               
Conread position:
               
147-508
               

               
Cow position:
               
chr14:32371819-32371456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
101, 86
               

               
Conread position:
               
147-510
               

               
Cow position:
               
chr14:40269920-40269554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
191, 108
               

               
Conread position:
               
148-501
               

               
Cow position:
               
chr14:37679081-37678715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
34, 26
               

               
Conread position:
               
148-509
               

               
Cow position:
               
chr14:46125348-46124972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
92, 160
               

               
Conread position:
               
148-538
               

               
Cow position:
               
chr14:40432851-40433241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
98, 14
               

               
Conread position:
               
149-492
               

               
Cow position:
               
chr14:35018830-35018482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 184
               

               
Conread position:
               
150-381
               

               
Cow position:
               
chr14:45718339-45718109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
79, 53
               

               
Conread position:
               
151-326
               

               
Cow position:
               
chr14:11031356-11031186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
151-404
               

               
Cow position:
               
chr14:12035336-12035587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
173, 6
               

               
Conread position:
               
151-407
               

               
Cow position:
               
chr14:1859687-1859432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
82, 32
               

               
Conread position:
               
151-407
               

               
Cow position:
               
chr14:44084564-44084297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
102, 108
               

               
Conread position:
               
151-408
               

               
Cow position:
               
chr14:46654616-46654362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
182, 20
               

               
Conread position:
               
151-433
               

               
Cow position:
               
chr14:16256684-16256974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
77, 162
               

               
Conread position:
               
151-468
               

               
Cow position:
               
chr14:39037151-39037479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
141, 52
               

               
Conread position:
               
151-476
               

               
Cow position:
               
chr14:34983792-34984122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
66, 129
               

               
Conread position:
               
151-485
               

               
Cow position:
               
chr14:19372264-19372610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
145, 217
               

               
Conread position:
               
151-486
               

               
Cow position:
               
chr14:6175522-6175851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
185, 64
               

               
Conread position:
               
151-540
               

               
Cow position:
               
chr14:20600310-20600706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 142
               

               
Conread position:
               
152-506
               

               
Cow position:
               
chr14:14187257-14187621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 96
               

               
Conread position:
               
152-518
               

               
Cow position:
               
chr14:9019958-9020326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
156, 27
               

               
Conread position:
               
152-520
               

               
Cow position:
               
chr14:21964063-21964421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 87
               

               
Conread position:
               
153-378
               

               
Cow position:
               
chr14:37422855-37422634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
151, 54
               

               
Conread position:
               
155-510
               

               
Cow position:
               
chr14:39778681-39779045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 205
               

               
Conread position:
               
155-521
               

               
Cow position:
               
chr14:13426779-13427120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
296, 87
               

               
Conread position:
               
156-493
               

               
Cow position:
               
chr14:49086237-49086580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
157, 86
               

               
Conread position:
               
156-493
               

               
Cow position:
               
chr14:50055329-50055676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
173, 20
               

               
Conread position:
               
157-475
               

               
Cow position:
               
chr14:33309572-33309252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
171, 128
               

               
Conread position:
               
157-485
               

               
Cow position:
               
chr14:1868452-1868136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
172, 130
               

               
Conread position:
               
157-497
               

               
Cow position:
               
chr14:17841360-17841008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
83, 33
               

               
Conread position:
               
157-508
               

               
Cow position:
               
chr14:9308161-9308515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 78
               

               
Conread position:
               
157-510
               

               
Cow position:
               
chr14:44878840-44878494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
171, 74
               

               
Conread position:
               
157-510
               

               
Cow position:
               
chr14:49021967-49021612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 62
               

               
Conread position:
               
157-518
               

               
Cow position:
               
chr14:10702908-10702534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
73, 151
               

               
Conread position:
               
157-521
               

               
Cow position:
               
chr14:13809871-13810240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 78
               

               
Conread position:
               
157-538
               

               
Cow position:
               
chr14:36555215-36554832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 41
               

               
Conread position:
               
158-508
               

               
Cow position:
               
chr14:48412950-48412587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 230
               

               
Conread position:
               
159-509
               

               
Cow position:
               
chr14:16834255-16834621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 240
               

               
Conread position:
               
159-525
               

               
Cow position:
               
chr14:38168625-38168992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
274, 161
               

               
Conread position:
               
160-497
               

               
Cow position:
               
chr14:34355776-34355423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
82, 267
               

               
Conread position:
               
161-505
               

               
Cow position:
               
chr14:10697566-10697239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
234, 10
               

               
Conread position:
               
161-510
               

               
Cow position:
               
chr14:5835847-5836196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
134, 75
               

               
Conread position:
               
161-540
               

               
Cow position:
               
chr14:18904671-18904283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 68
               

               
Conread position:
               
163-496
               

               
Cow position:
               
chr14:24796491-24796145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
146, 11
               

               
Conread position:
               
163-510
               

               
Cow position:
               
chr14:8784138-8784467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
172, 39
               

               
Conread position:
               
163-510
               

               
Cow position:
               
chr14:36709061-36709414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
45, 50
               

               
Conread position:
               
163-513
               

               
Cow position:
               
chr14:20385048-20384690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
166, 139
               

               
Conread position:
               
164-438
               

               
Cow position:
               
chr14:15997827-15997555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
138, 194
               

               
Conread position:
               
164-505
               

               
Cow position:
               
chr14:40033933-40034257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
265, 72
               

               
Conread position:
               
164-508
               

               
Cow position:
               
chr14:43035840-43036168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
251, 15
               

               
Conread position:
               
164-510
               

               
Cow position:
               
chr14:39775112-39774763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
123, 50
               

               
Conread position:
               
164-521
               

               
Cow position:
               
chr14:25403997-25403638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 168
               

               
Conread position:
               
164-521
               

               
Cow position:
               
chr14:35544566-35544209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
134, 65
               

               
Conread position:
               
164-540
               

               
Cow position:
               
chr14:27791480-27791855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
16, 122
               

               
Conread position:
               
166-399
               

               
Cow position:
               
chr14:49767403-49767630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
86, 92
               

               
Conread position:
               
166-475
               

               
Cow position:
               
chr14:33338535-33338223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
83, 59
               

               
Conread position:
               
167-431
               

               
Cow position:
               
chr14:5572883-5573148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
8, 92
               

               
Conread position:
               
169-540
               

               
Cow position:
               
chr14:41180771-41180391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
56, 27
               

               
Conread position:
               
170-508
               

               
Cow position:
               
chr14:25385943-25385602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
7, 58
               

               
Conread position:
               
172-504
               

               
Cow position:
               
chr14:34125238-34124891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
77, 140
               

               
Conread position:
               
172-522
               

               
Cow position:
               
chr14:25362289-25362651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
10, 33
               

               
Conread position:
               
174-510
               

               
Cow position:
               
chr14:22966704-22967043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 16
               

               
Conread position:
               
175-505
               

               
Cow position:
               
chr14:38378965-38379307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 133
               

               
Conread position:
               
176-407
               

               
Cow position:
               
chr14:10631169-10630943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
176-521
               

               
Cow position:
               
chr14:12856550-12856898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
66, 32
               

               
Conread position:
               
177-510
               

               
Cow position:
               
chr14:17143527-17143863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
143, 111
               

               
Conread position:
               
180-497
               

               
Cow position:
               
chr14:37884456-37884132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
62, 55
               

               
Conread position:
               
180-510
               

               
Cow position:
               
chr14:26620557-26620911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
27, 138
               

               
Conread position:
               
181-497
               

               
Cow position:
               
chr14:11615266-11614943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
89, 54
               

               
Conread position:
               
181-508
               

               
Cow position:
               
chr14:6985005-6984678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
74, 9
               

               
Conread position:
               
185-440
               

               
Cow position:
               
chr14:26191145-26190885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
109, 175
               

               
Conread position:
               
185-493
               

               
Cow position:
               
chr14:6190972-6190663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
18, 68
               

               
Conread position:
               
187-470
               

               
Cow position:
               
chr14:29029790-29030080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
142, 44
               

               
Conread position:
               
187-540
               

               
Cow position:
               
chr14:41325486-41325114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
104, 203
               

               
Conread position:
               
190-505
               

               
Cow position:
               
chr14:39821130-39821453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
109, 14
               

               
Conread position:
               
191-510
               

               
Cow position:
               
chr14:33774082-33773761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
93, 44
               

               
Conread position:
               
191-519
               

               
Cow position:
               
chr14:3564249-3564574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
138, 103
               

               
Conread position:
               
191-540
               

               
Cow position:
               
chr14:42784929-42785264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
260, 48
               

               
Conread position:
               
204-510
               

               
Cow position:
               
chr14:25231672-25231357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
51, 31
               

               
Conread position:
               
208-510
               

               
Cow position:
               
chr14:50027207-50027506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
38, 6
               

               
Conread position:
               
215-510
               

               
Cow position:
               
chr14:15032745-15033048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
18, 28
               

               
Conread position:
               
230-510
               

               
Cow position:
               
chr14:7558437-7558140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
63, 260
               

               
Conread position:
               
230-510
               

               
Cow position:
               
chr14:31734851-31734561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
70, 195
               

               
Conread position:
               
232-539
               

               
Cow position:
               
chr14:41756270-41756580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 45
               

               
Conread position:
               
238-508
               

               
Cow position:
               
chr14:33462177-33462448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
68, 9
               

               
Conread position:
               
238-538
               

               
Cow position:
               
chr14:37236518-37236798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
217, 67
               

               
Conread position:
               
240-521
               

               
Cow position:
               
chr14:24684118-24683830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
57, 47
               

               
Conread position:
               
240-521
               

               
Cow position:
               
chr14:33828176-33828455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 60
               

               
Conread position:
               
241-444
               

               
Cow position:
               
chr14:14580884-14581084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
88, 62
               

               
Conread position:
               
241-465
               

               
Cow position:
               
chr14:33643765-33643544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
88, 63
               

               
Conread position:
               
241-510
               

               
Cow position:
               
chr14:38296267-38295984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
92, 161
               

               
Conread position:
               
241-540
               

               
Cow position:
               
chr14:33326380-33326070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 62
               

               
Conread position:
               
242-510
               

               
Cow position:
               
chr14:27362056-27362336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
94, 59
               

               
Conread position:
               
246-469
               

               
Cow position:
               
chr14:20483437-20483216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
54, 65
               

               
Conread position:
               
246-508
               

               
Cow position:
               
chr14:8964568-8964832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
188, 55
               

               
Conread position:
               
246-510
               

               
Cow position:
               
chr14:10912945-10912681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
10, 29
               

               
Conread position:
               
246-510
               

               
Cow position:
               
chr14:11820100-11819832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
87, 58
               

               
Conread position:
               
247-466
               

               
Cow position:
               
chr14:23761890-23762118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
81, 215
               

               
Conread position:
               
253-510
               

               
Cow position:
               
chr14:40347134-40346886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
76, 65
               

               
Conread position:
               
254-493
               

               
Cow position:
               
chr14:19221906-19222156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
50, 216
               

               
Conread position:
               
254-510
               

               
Cow position:
               
chr14:3878489-3878744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
181, 31
               

               
Conread position:
               
254-510
               

               
Cow position:
               
chr14:14280439-14280709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
45, 222
               

               
Conread position:
               
254-510
               

               
Cow position:
               
chr14:46490231-46489964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
75, 51
               

               
Conread position:
               
254-517
               

               
Cow position:
               
chr14:24580956-24581225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
50, 71
               

               
Conread position:
               
254-521
               

               
Cow position:
               
chr14:24991850-24992118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 56
               

               
Conread position:
               
254-521
               

               
Cow position:
               
chr14:39422565-39422288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
75, 119
               

               
Conread position:
               
254-525
               

               
Cow position:
               
chr14:24785973-24786238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
75, 47
               

               
Conread position:
               
255-510
               

               
Cow position:
               
chr14:27312452-27312716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 106
               

               
Conread position:
               
255-510
               

               
Cow position:
               
chr14:35266982-35266722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
123, 13
               

               
Conread position:
               
255-510
               

               
Cow position:
               
chr14:40183078-40183336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
150, 46
               

               
Conread position:
               
255-534
               

               
Cow position:
               
chr14:15518347-15518060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
74, 44
               

               
Conread position:
               
257-496
               

               
Cow position:
               
chr14:12036814-12036565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
72, 56
               

               
Conread position:
               
258-510
               

               
Cow position:
               
chr14:35651161-35650914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
174, 47
               

               
Conread position:
               
259-540
               

               
Cow position:
               
chr14:11981670-11981978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
260-505
               

               
Cow position:
               
chr14:43046183-43046431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
67, 42
               

               
Conread position:
               
262-409
               

               
Cow position:
               
chr14:38673596-38673447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
262-540
               

               
Cow position:
               
chr14:12250160-12249872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
67, 39
               

               
Conread position:
               
263-510
               

               
Cow position:
               
chr14:11748873-11748630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
143, 37
               

               
Conread position:
               
264-501
               

               
Cow position:
               
chr14:22381515-22381272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
65, 122
               

               
Conread position:
               
271-470
               

               
Cow position:
               
chr14:10721683-10721483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
58, 32
               

               
Conread position:
               
271-505
               

               
Cow position:
               
chr14:23464771-23464528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
55, 31
               

               
Conread position:
               
271-510
               

               
Cow position:
               
chr14:21284667-21284921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
33, 45
               

               
Conread position:
               
271-520
               

               
Cow position:
               
chr14:6419257-6419013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
58, 21
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr14:25378450-25378202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
36, 13
               

               
Conread position:
               
281-510
               

               
Cow position:
               
chr14:19957859-19957619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
282-510
               

               
Cow position:
               
chr14:23154829-23154592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
67, 23
               

               
Conread position:
               
283-517
               

               
Cow position:
               
chr14:15913493-15913252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
14, 134
               

               
Conread position:
               
289-510
               

               
Cow position:
               
chr14:46782333-46782103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
9, 102
               

               
Conread position:
               
290-508
               

               
Cow position:
               
chr14:36151471-36151682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
39, 11
               

               
Conread position:
               
290-510
               

               
Cow position:
               
chr14:8754393-8754618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
39, 12
               

               
Conread position:
               
290-521
               

               
Cow position:
               
chr14:48399847-48400073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
80, 45
               

               
Conread position:
               
291-510
               

               
Cow position:
               
chr14:18448948-18448715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
291-514
               

               
Cow position:
               
chr14:38406847-38406629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
291-540
               

               
Cow position:
               
chr14:33538858-33538604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 12
               

               
Conread position:
               
292-450
               

               
Cow position:
               
chr14:37435234-37435066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
6, 62
               

               
Conread position:
               
292-497
               

               
Cow position:
               
chr14:35712116-35711902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
11, 98
               

               
Conread position:
               
292-510
               

               
Cow position:
               
chr14:12488636-12488410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
12, 69
               

               
Conread position:
               
292-513
               

               
Cow position:
               
chr14:26448814-26449043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
37, 69
               

               
Conread position:
               
293-510
               

               
Cow position:
               
chr14:4649943-4649724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
94, 20
               

               
Conread position:
               
293-510
               

               
Cow position:
               
chr14:33209284-33209067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
36, 74
               

               
Conread position:
               
293-510
               

               
Cow position:
               
chr14:39302292-39302071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
65, 23
               

               
Conread position:
               
293-537
               

               
Cow position:
               
chr14:10906780-10907039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
11, 61
               

               
Conread position:
               
294-458
               

               
Cow position:
               
chr14:22952927-22952758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
35, 137
               

               
Conread position:
               
294-462
               

               
Cow position:
               
chr14:42277013-42277182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
35, 8
               

               
Conread position:
               
294-507
               

               
Cow position:
               
chr14:21230117-21230323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
93, 8
               

               
Conread position:
               
294-510
               

               
Cow position:
               
chr14:4109406-4109181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
140, 45
               

               
Conread position:
               
295-497
               

               
Cow position:
               
chr14:17397530-17397326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
137, 7
               

               
Conread position:
               
296-423
               

               
Cow position:
               
chr14:50518904-50518776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
33, 89
               

               
Conread position:
               
296-510
               

               
Cow position:
               
chr14:7270939-7270724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
32, 47
               

               
Conread position:
               
297-510
               

               
Cow position:
               
chr14:23055676-23055896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
36, 8
               

               
Conread position:
               
299-513
               

               
Cow position:
               
chr14:12614022-12613808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
30, 138
               

               
Conread position:
               
301-510
               

               
Cow position:
               
chr14:19624159-19624382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
302-496
               

               
Cow position:
               
chr14:21018187-21018390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
302-517
               

               
Cow position:
               
chr14:445494-445700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
28, 50
               

               
Conread position:
               
302-521
               

               
Cow position:
               
chr14:35700501-35700733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
27, 86
               

               
Conread position:
               
305-452
               

               
Cow position:
               
chr14:28924463-28924617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
305-501
               

               
Cow position:
               
chr14:19975306-19975500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
18, 63
               

               
Conread position:
               
305-513
               

               
Cow position:
               
chr14:46965637-46965853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
24, 82
               

               
Conread position:
               
305-517
               

               
Cow position:
               
chr14:34395595-34395370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
24, 54
               

               
Conread position:
               
306-490
               

               
Cow position:
               
chr14:12484221-12484032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
23, 80
               

               
Conread position:
               
308-510
               

               
Cow position:
               
chr14:19633260-19633474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
28, 77
               

               
Conread position:
               
310-526
               

               
Cow position:
               
chr14:42918172-42918398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
20, 77
               

               
Conread position:
               
311-510
               

               
Cow position:
               
chr14:7316911-7317128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
18, 33
               

               
Conread position:
               
311-510
               

               
Cow position:
               
chr14:46735388-46735604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
312-540
               

               
Cow position:
               
chr14:5502077-5501827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
313-496
               

               
Cow position:
               
chr14:6234181-6233985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
313-501
               

               
Cow position:
               
chr14:42625563-42625750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
15, 37
               

               
Conread position:
               
313-510
               

               
Cow position:
               
chr14:19996402-19996610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
314-510
               

               
Cow position:
               
chr14:39518782-39518987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
14, 192
               

               
Conread position:
               
316-501
               

               
Cow position:
               
chr14:41190787-41190597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
13, 50
               

               
Conread position:
               
316-537
               

               
Cow position:
               
chr14:8006238-8006021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
13, 97
               

               
Conread position:
               
318-496
               

               
Cow position:
               
chr14:22865798-22865622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
82, 14
               

               
Conread position:
               
319-471
               

               
Cow position:
               
chr14:26470719-26470882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
322-469
               

               
Cow position:
               
chr14:24840077-24839924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
60, 10
               

               
Conread position:
               
322-510
               

               
Cow position:
               
chr14:37108809-37108619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
65, 10
               

               
Conread position:
               
323-513
               

               
Cow position:
               
chr14:47385741-47385930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
6, 62
               

               
Conread position:
               
324-500
               

               
Cow position:
               
chr14:9875494-9875671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
34, 11
               

               
Conread position:
               
326-501
               

               
Cow position:
               
chr14:11641468-11641292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
86, 51
               

               
Conread position:
               
326-521
               

               
Cow position:
               
chr14:16310803-16310608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
106, 159
               

               
Conread position:
               
327-510
               

               
Cow position:
               
chr14:24893859-24894052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
328-516
               

               
Cow position:
               
chr14:41716207-41716405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
23, 92
               

               
Conread position:
               
332-509
               

               
Cow position:
               
chr14:34330652-34330830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
121, 102
               

               
Conread position:
               
332-510
               

               
Cow position:
               
chr14:30152618-30152428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
50, 17
               

               
Conread position:
               
335-493
               

               
Cow position:
               
chr14:47036686-47036525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
82, 14
               

               
Conread position:
               
335-495
               

               
Cow position:
               
chr14:37640346-37640510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
20, 25
               

               
Conread position:
               
335-497
               

               
Cow position:
               
chr14:9029566-9029406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
116, 47
               

               
Conread position:
               
336-510
               

               
Cow position:
               
chr14:15781825-15781637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
336-517
               

               
Cow position:
               
chr14:13997601-13997418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
14, 23
               

               
Conread position:
               
337-510
               

               
Cow position:
               
chr14:25695493-25695672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
339-497
               

               
Cow position:
               
chr14:34020801-34020968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
95, 47
               

               
Conread position:
               
339-504
               

               
Cow position:
               
chr14:8495267-8495439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
16, 21
               

               
Conread position:
               
340-540
               

               
Cow position:
               
chr14:35509851-35509650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
74, 105
               

               
Conread position:
               
341-510
               

               
Cow position:
               
chr14:27866021-27865840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
46, 168
               

               
Conread position:
               
346-521
               

               
Cow position:
               
chr14:21534913-21534738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
70, 38
               

               
Conread position:
               
347-510
               

               
Cow position:
               
chr14:45068967-45068795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
351-509
               

               
Cow position:
               
chr14:34329527-34329368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
102, 83
               

               
Conread position:
               
351-510
               

               
Cow position:
               
chr14:15795679-15795518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
78, 26
               

               
Conread position:
               
361-521
               

               
Cow position:
               
chr14:29300229-29300059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
27, 51
               

               
Conread position:
               
362-518
               

               
Cow position:
               
chr14:13634574-13634406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
374-521
               

               
Cow position:
               
chr14:19513227-19513075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
58, 127
               

               
Conread position:
               
384-510
               

               
Cow position:
               
chr14:25993531-25993399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
384-510
               

               
Cow position:
               
chr14:36585799-36585667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
48, 0
               
Show alignments to all cow chromosomes.