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Cow genome map

           
Conread name:
           
Ss1.1-rpigcf0_013818.5
        

               
Conread position:
               
2-334
               

               
Cow position:
               
chr28:33322719-33322392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
40, 32
               

               
Conread position:
               
3-366
               

               
Cow position:
               
chr28:7388500-7388861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
77, 29
               

               
Conread position:
               
6-297
               

               
Cow position:
               
chr28:9705924-9705629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
35, 230
               

               
Conread position:
               
7-508
               

               
Cow position:
               
chr28:24966651-24966147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
20, 40
               

               
Conread position:
               
16-266
               

               
Cow position:
               
chr28:15362831-15362586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
104, 11
               

               
Conread position:
               
17-323
               

               
Cow position:
               
chr28:3725959-3726262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
95, 29
               

               
Conread position:
               
25-423
               

               
Cow position:
               
chr28:13245806-13245393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
97, 29
               

               
Conread position:
               
26-282
               

               
Cow position:
               
chr28:8396574-8396326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
50, 65
               

               
Conread position:
               
26-508
               

               
Cow position:
               
chr28:22346266-22345778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 31
               

               
Conread position:
               
26-540
               

               
Cow position:
               
chr28:8787786-8787274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 24
               

               
Conread position:
               
28-278
               

               
Cow position:
               
chr28:26826466-26826218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
39, 22
               

               
Conread position:
               
31-216
               

               
Cow position:
               
chr28:22278384-22278575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
27, 39
               

               
Conread position:
               
32-275
               

               
Cow position:
               
chr28:6322063-6321815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
39, 166
               

               
Conread position:
               
32-471
               

               
Cow position:
               
chr28:19055254-19054812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
92, 36
               

               
Conread position:
               
34-217
               

               
Cow position:
               
chr28:24767647-24767460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
34-477
               

               
Cow position:
               
chr28:22371437-22371889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
181, 62
               

               
Conread position:
               
35-433
               

               
Cow position:
               
chr28:2524179-2523765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
26, 50
               

               
Conread position:
               
38-326
               

               
Cow position:
               
chr28:6283254-6283538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
42, 66
               

               
Conread position:
               
40-275
               

               
Cow position:
               
chr28:5674103-5673873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
83, 23
               

               
Conread position:
               
45-265
               

               
Cow position:
               
chr28:7644971-7644748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
78, 152
               

               
Conread position:
               
47-476
               

               
Cow position:
               
chr28:4884025-4884476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
29, 119
               

               
Conread position:
               
48-538
               

               
Cow position:
               
chr28:1099452-1099918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
36, 95
               

               
Conread position:
               
51-513
               

               
Cow position:
               
chr28:11527041-11527502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 23
               

               
Conread position:
               
53-440
               

               
Cow position:
               
chr28:11828737-11829104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 177
               

               
Conread position:
               
53-510
               

               
Cow position:
               
chr28:14657937-14657457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 270
               

               
Conread position:
               
54-275
               

               
Cow position:
               
chr28:11411319-11411538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
29, 93
               

               
Conread position:
               
54-372
               

               
Cow position:
               
chr28:25129100-25128783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
66, 9
               

               
Conread position:
               
54-443
               

               
Cow position:
               
chr28:4643554-4643932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
275, 19
               

               
Conread position:
               
54-452
               

               
Cow position:
               
chr28:11866450-11866853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 72
               

               
Conread position:
               
54-476
               

               
Cow position:
               
chr28:5436871-5437301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 15
               

               
Conread position:
               
55-227
               

               
Cow position:
               
chr28:659066-659249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
24, 80
               

               
Conread position:
               
55-231
               

               
Cow position:
               
chr28:34830378-34830196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
5, 52
               

               
Conread position:
               
55-253
               

               
Cow position:
               
chr28:3678576-3678382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
68, 93
               

               
Conread position:
               
55-290
               

               
Cow position:
               
chr28:4101728-4101503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
191, 18
               

               
Conread position:
               
55-297
               

               
Cow position:
               
chr28:10959014-10958765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
67, 18
               

               
Conread position:
               
55-434
               

               
Cow position:
               
chr28:5200048-5199667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
23, 197
               

               
Conread position:
               
55-452
               

               
Cow position:
               
chr28:23724254-23724639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
67, 18
               

               
Conread position:
               
55-508
               

               
Cow position:
               
chr28:4071173-4070728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 18
               

               
Conread position:
               
55-510
               

               
Cow position:
               
chr28:24672487-24672030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
17, 185
               

               
Conread position:
               
56-297
               

               
Cow position:
               
chr28:17740041-17739801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
67, 180
               

               
Conread position:
               
56-520
               

               
Cow position:
               
chr28:5273210-5273677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
7, 359
               

               
Conread position:
               
56-539
               

               
Cow position:
               
chr28:5204401-5203929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 43
               

               
Conread position:
               
58-233
               

               
Cow position:
               
chr28:28903345-28903520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
62, 84
               

               
Conread position:
               
58-405
               

               
Cow position:
               
chr28:1538382-1538036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
54, 26
               

               
Conread position:
               
58-410
               

               
Cow position:
               
chr28:7008770-7009112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
65, 17
               

               
Conread position:
               
58-427
               

               
Cow position:
               
chr28:24082483-24082116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
65, 15
               

               
Conread position:
               
58-493
               

               
Cow position:
               
chr28:8347952-8347508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 249
               

               
Conread position:
               
58-496
               

               
Cow position:
               
chr28:751442-750997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 145
               

               
Conread position:
               
58-510
               

               
Cow position:
               
chr28:22133119-22132683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 17
               

               
Conread position:
               
58-510
               

               
Cow position:
               
chr28:23531080-23530621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
28, 44
               

               
Conread position:
               
58-521
               

               
Cow position:
               
chr28:30302995-30303450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 25
               

               
Conread position:
               
58-522
               

               
Cow position:
               
chr28:5144302-5144778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 15
               

               
Conread position:
               
59-498
               

               
Cow position:
               
chr28:9100141-9099703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 32
               

               
Conread position:
               
59-508
               

               
Cow position:
               
chr28:4307681-4308139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 12
               

               
Conread position:
               
59-510
               

               
Cow position:
               
chr28:3078483-3078921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 63
               

               
Conread position:
               
60-299
               

               
Cow position:
               
chr28:5630311-5630072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
63, 139
               

               
Conread position:
               
60-402
               

               
Cow position:
               
chr28:5577746-5577390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
15, 53
               

               
Conread position:
               
60-497
               

               
Cow position:
               
chr28:16918964-16919392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 13
               

               
Conread position:
               
60-508
               

               
Cow position:
               
chr28:12619793-12619321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
15, 142
               

               
Conread position:
               
62-521
               

               
Cow position:
               
chr28:6059261-6059730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 37
               

               
Conread position:
               
63-433
               

               
Cow position:
               
chr28:4834635-4835002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
60, 9
               

               
Conread position:
               
63-510
               

               
Cow position:
               
chr28:5931553-5931110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 39
               

               
Conread position:
               
63-540
               

               
Cow position:
               
chr28:22308854-22308385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 231
               

               
Conread position:
               
64-499
               

               
Cow position:
               
chr28:12951624-12951200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 75
               

               
Conread position:
               
64-510
               

               
Cow position:
               
chr28:13474507-13474063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 78
               

               
Conread position:
               
65-508
               

               
Cow position:
               
chr28:4939002-4938597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
389, 30
               

               
Conread position:
               
70-223
               

               
Cow position:
               
chr28:26304268-26304113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
54, 33
               

               
Conread position:
               
70-233
               

               
Cow position:
               
chr28:17737948-17738113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
70-234
               

               
Cow position:
               
chr28:11562041-11562207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
70-264
               

               
Cow position:
               
chr28:32014987-32014793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
53, 79
               

               
Conread position:
               
70-265
               

               
Cow position:
               
chr28:2077703-2077511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
53, 79
               

               
Conread position:
               
70-281
               

               
Cow position:
               
chr28:18797513-18797312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
14, 55
               

               
Conread position:
               
70-332
               

               
Cow position:
               
chr28:8827366-8827106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
50, 174
               

               
Conread position:
               
70-351
               

               
Cow position:
               
chr28:5262721-5262441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
53, 151
               

               
Conread position:
               
70-381
               

               
Cow position:
               
chr28:3011065-3011382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 157
               

               
Conread position:
               
70-408
               

               
Cow position:
               
chr28:3449511-3449164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
53, 75
               

               
Conread position:
               
70-422
               

               
Cow position:
               
chr28:10495098-10495426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
53, 21
               

               
Conread position:
               
70-508
               

               
Cow position:
               
chr28:34442554-34443005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
53, 103
               

               
Conread position:
               
70-510
               

               
Cow position:
               
chr28:9426150-9426585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 69
               

               
Conread position:
               
71-227
               

               
Cow position:
               
chr28:4866377-4866527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
52, 68
               

               
Conread position:
               
71-508
               

               
Cow position:
               
chr28:11422618-11423045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 28
               

               
Conread position:
               
71-513
               

               
Cow position:
               
chr28:9740659-9740225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
34, 56
               

               
Conread position:
               
73-225
               

               
Cow position:
               
chr28:10480603-10480759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
11, 140
               

               
Conread position:
               
73-242
               

               
Cow position:
               
chr28:3759196-3759021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
73-273
               

               
Cow position:
               
chr28:19038819-19039019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
51, 79
               

               
Conread position:
               
73-302
               

               
Cow position:
               
chr28:20174037-20173807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
49, 113
               

               
Conread position:
               
73-330
               

               
Cow position:
               
chr28:4013282-4013031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
50, 69
               

               
Conread position:
               
73-370
               

               
Cow position:
               
chr28:11197473-11197771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
50, 165
               

               
Conread position:
               
73-424
               

               
Cow position:
               
chr28:30746539-30746879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
43, 71
               

               
Conread position:
               
73-433
               

               
Cow position:
               
chr28:4159163-4158798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
50, 219
               

               
Conread position:
               
73-439
               

               
Cow position:
               
chr28:4016722-4016373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
50, 26
               

               
Conread position:
               
73-445
               

               
Cow position:
               
chr28:8291612-8291264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
47, 69
               

               
Conread position:
               
73-505
               

               
Cow position:
               
chr28:3492588-3493022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 53
               

               
Conread position:
               
73-505
               

               
Cow position:
               
chr28:9636258-9636695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 66
               

               
Conread position:
               
73-508
               

               
Cow position:
               
chr28:7267750-7268177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 52
               

               
Conread position:
               
73-508
               

               
Cow position:
               
chr28:22500307-22500722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
23, 79
               

               
Conread position:
               
73-508
               

               
Cow position:
               
chr28:30326902-30327322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
54, 74
               

               
Conread position:
               
73-509
               

               
Cow position:
               
chr28:20409590-20409161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 107
               

               
Conread position:
               
73-521
               

               
Cow position:
               
chr28:9285178-9285632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 60
               

               
Conread position:
               
73-521
               

               
Cow position:
               
chr28:16204131-16204587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 106
               

               
Conread position:
               
73-521
               

               
Cow position:
               
chr28:21868656-21868195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 84
               

               
Conread position:
               
73-536
               

               
Cow position:
               
chr28:5074322-5074773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
50, 92
               

               
Conread position:
               
73-540
               

               
Cow position:
               
chr28:12430805-12430333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 7
               

               
Conread position:
               
74-293
               

               
Cow position:
               
chr28:5255070-5254854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
10, 53
               

               
Conread position:
               
74-296
               

               
Cow position:
               
chr28:7131892-7132111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
12, 68
               

               
Conread position:
               
74-500
               

               
Cow position:
               
chr28:11426349-11426778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 53
               

               
Conread position:
               
74-508
               

               
Cow position:
               
chr28:16369890-16370315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
74-509
               

               
Cow position:
               
chr28:12964781-12964335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
11, 160
               

               
Conread position:
               
74-540
               

               
Cow position:
               
chr28:25700671-25701134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 29
               

               
Conread position:
               
76-232
               

               
Cow position:
               
chr28:11827884-11827726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
76-355
               

               
Cow position:
               
chr28:4182197-4181920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
52, 80
               

               
Conread position:
               
76-371
               

               
Cow position:
               
chr28:5138803-5139097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
44, 63
               

               
Conread position:
               
76-405
               

               
Cow position:
               
chr28:11079496-11079175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
64, 75
               

               
Conread position:
               
76-467
               

               
Cow position:
               
chr28:5224900-5224512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
38, 134
               

               
Conread position:
               
76-496
               

               
Cow position:
               
chr28:25057152-25056743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
47, 24
               

               
Conread position:
               
76-505
               

               
Cow position:
               
chr28:33884598-33884171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 121
               

               
Conread position:
               
76-510
               

               
Cow position:
               
chr28:3143689-3144133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 52
               

               
Conread position:
               
77-311
               

               
Cow position:
               
chr28:17680820-17680584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
46, 161
               

               
Conread position:
               
79-251
               

               
Cow position:
               
chr28:2825615-2825441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
80-508
               

               
Cow position:
               
chr28:16210909-16211338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 77
               

               
Conread position:
               
82-415
               

               
Cow position:
               
chr28:18369823-18370163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
41, 139
               

               
Conread position:
               
82-446
               

               
Cow position:
               
chr28:11762888-11762524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
42, 213
               

               
Conread position:
               
83-217
               

               
Cow position:
               
chr28:3311032-3311168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
83-219
               

               
Cow position:
               
chr28:16856917-16857053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
37, 72
               

               
Conread position:
               
83-220
               

               
Cow position:
               
chr28:21263343-21263210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
40, 62
               

               
Conread position:
               
83-227
               

               
Cow position:
               
chr28:8716191-8716342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
83-227
               

               
Cow position:
               
chr28:17620170-17620315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
40, 131
               

               
Conread position:
               
83-227
               

               
Cow position:
               
chr28:21118869-21118723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
28, 32
               

               
Conread position:
               
83-227
               

               
Cow position:
               
chr28:30385344-30385198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
83-232
               

               
Cow position:
               
chr28:13356177-13356331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
83-233
               

               
Cow position:
               
chr28:118803-118649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
83-235
               

               
Cow position:
               
chr28:16200551-16200705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
83-250
               

               
Cow position:
               
chr28:3423966-3423800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
40, 72
               

               
Conread position:
               
83-250
               

               
Cow position:
               
chr28:10196681-10196842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
83-264
               

               
Cow position:
               
chr28:2821450-2821262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
83-264
               

               
Cow position:
               
chr28:10252726-10252908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
37, 80
               

               
Conread position:
               
83-266
               

               
Cow position:
               
chr28:117569-117756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
83-266
               

               
Cow position:
               
chr28:19994757-19994939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
40, 161
               

               
Conread position:
               
83-268
               

               
Cow position:
               
chr28:9109400-9109221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
40, 66
               

               
Conread position:
               
83-269
               

               
Cow position:
               
chr28:11398605-11398793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
83-270
               

               
Cow position:
               
chr28:4074166-4073972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
37, 64
               

               
Conread position:
               
83-275
               

               
Cow position:
               
chr28:5188241-5188431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
124, 43
               

               
Conread position:
               
83-277
               

               
Cow position:
               
chr28:4163391-4163583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
39, 153
               

               
Conread position:
               
83-281
               

               
Cow position:
               
chr28:6563705-6563906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
83-290
               

               
Cow position:
               
chr28:5232129-5231921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
10, 90
               

               
Conread position:
               
83-295
               

               
Cow position:
               
chr28:27721885-27721681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
37, 116
               

               
Conread position:
               
83-296
               

               
Cow position:
               
chr28:4937050-4937265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
83-299
               

               
Cow position:
               
chr28:4186092-4185881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
83-322
               

               
Cow position:
               
chr28:20397177-20397418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
16, 78
               

               
Conread position:
               
83-323
               

               
Cow position:
               
chr28:34843383-34843623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
59, 43
               

               
Conread position:
               
83-326
               

               
Cow position:
               
chr28:11059680-11059451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
169, 43
               

               
Conread position:
               
83-349
               

               
Cow position:
               
chr28:11814890-11815156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
40, 59
               

               
Conread position:
               
83-354
               

               
Cow position:
               
chr28:7350839-7350575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
40, 16
               

               
Conread position:
               
83-358
               

               
Cow position:
               
chr28:4046033-4045765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
40, 53
               

               
Conread position:
               
83-375
               

               
Cow position:
               
chr28:6358221-6358513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
36, 199
               

               
Conread position:
               
83-381
               

               
Cow position:
               
chr28:12933547-12933840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
153, 17
               

               
Conread position:
               
83-381
               

               
Cow position:
               
chr28:19564046-19564337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
40, 62
               

               
Conread position:
               
83-381
               

               
Cow position:
               
chr28:23296508-23296214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
40, 67
               

               
Conread position:
               
83-399
               

               
Cow position:
               
chr28:30234573-30234265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
38, 126
               

               
Conread position:
               
83-402
               

               
Cow position:
               
chr28:11346300-11346614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
40, 67
               

               
Conread position:
               
83-411
               

               
Cow position:
               
chr28:19262395-19262727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 173
               

               
Conread position:
               
83-465
               

               
Cow position:
               
chr28:10845291-10844920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
43, 32
               

               
Conread position:
               
83-470
               

               
Cow position:
               
chr28:4089870-4090248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
40, 58
               

               
Conread position:
               
83-477
               

               
Cow position:
               
chr28:12598525-12598135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
190, 43
               

               
Conread position:
               
83-485
               

               
Cow position:
               
chr28:25973731-25973311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
40, 223
               

               
Conread position:
               
83-488
               

               
Cow position:
               
chr28:14710528-14710123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
35, 14
               

               
Conread position:
               
83-493
               

               
Cow position:
               
chr28:10053143-10053565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 16
               

               
Conread position:
               
83-501
               

               
Cow position:
               
chr28:3746386-3745967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
168, 43
               

               
Conread position:
               
83-501
               

               
Cow position:
               
chr28:34430234-34430661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 80
               

               
Conread position:
               
83-505
               

               
Cow position:
               
chr28:29416536-29416953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
225, 40
               

               
Conread position:
               
83-508
               

               
Cow position:
               
chr28:3914894-3914469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 40
               

               
Conread position:
               
83-508
               

               
Cow position:
               
chr28:34877783-34878214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 102
               

               
Conread position:
               
83-510
               

               
Cow position:
               
chr28:3023727-3024155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 67
               

               
Conread position:
               
83-510
               

               
Cow position:
               
chr28:4282300-4282735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 80
               

               
Conread position:
               
83-510
               

               
Cow position:
               
chr28:10615761-10616194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 16
               

               
Conread position:
               
83-510
               

               
Cow position:
               
chr28:11759372-11759780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
43, 79
               

               
Conread position:
               
83-510
               

               
Cow position:
               
chr28:14998253-14997821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
87, 41
               

               
Conread position:
               
83-510
               

               
Cow position:
               
chr28:21103631-21104090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 100
               

               
Conread position:
               
83-510
               

               
Cow position:
               
chr28:21845140-21844713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 16
               

               
Conread position:
               
83-510
               

               
Cow position:
               
chr28:23616594-23616159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
40, 117
               

               
Conread position:
               
83-510
               

               
Cow position:
               
chr28:27218514-27218077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 134
               

               
Conread position:
               
83-510
               

               
Cow position:
               
chr28:34230420-34229986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 214
               

               
Conread position:
               
83-521
               

               
Cow position:
               
chr28:26743820-26743365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
83-522
               

               
Cow position:
               
chr28:20124970-20124527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 50
               

               
Conread position:
               
83-537
               

               
Cow position:
               
chr28:22323448-22322994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
233, 41
               

               
Conread position:
               
83-540
               

               
Cow position:
               
chr28:7697790-7698257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 160
               

               
Conread position:
               
83-540
               

               
Cow position:
               
chr28:10606449-10606888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 58
               

               
Conread position:
               
83-540
               

               
Cow position:
               
chr28:15601463-15600988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 30
               

               
Conread position:
               
84-234
               

               
Cow position:
               
chr28:4227664-4227515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
63, 37
               

               
Conread position:
               
84-238
               

               
Cow position:
               
chr28:6301272-6301116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
84-283
               

               
Cow position:
               
chr28:8259820-8259618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
84-298
               

               
Cow position:
               
chr28:3200650-3200434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
84-317
               

               
Cow position:
               
chr28:11057856-11058086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
39, 147
               

               
Conread position:
               
84-385
               

               
Cow position:
               
chr28:31223369-31223678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
39, 81
               

               
Conread position:
               
84-425
               

               
Cow position:
               
chr28:13527386-13527051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
39, 15
               

               
Conread position:
               
84-433
               

               
Cow position:
               
chr28:26982548-26982903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 49
               

               
Conread position:
               
84-453
               

               
Cow position:
               
chr28:16419363-16418988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
36, 58
               

               
Conread position:
               
84-508
               

               
Cow position:
               
chr28:16346350-16346767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
40, 11
               

               
Conread position:
               
84-510
               

               
Cow position:
               
chr28:5236407-5236843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 224
               

               
Conread position:
               
84-521
               

               
Cow position:
               
chr28:5684888-5684447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 58
               

               
Conread position:
               
85-227
               

               
Cow position:
               
chr28:8655979-8656120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
85-324
               

               
Cow position:
               
chr28:26531094-26531331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
39, 11
               

               
Conread position:
               
85-368
               

               
Cow position:
               
chr28:17071527-17071237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
38, 230
               

               
Conread position:
               
85-405
               

               
Cow position:
               
chr28:8140671-8140350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
41, 17
               

               
Conread position:
               
85-412
               

               
Cow position:
               
chr28:2775237-2774924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
40, 201
               

               
Conread position:
               
85-415
               

               
Cow position:
               
chr28:10057400-10057734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
35, 17
               

               
Conread position:
               
85-461
               

               
Cow position:
               
chr28:16416831-16416447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
37, 95
               

               
Conread position:
               
85-497
               

               
Cow position:
               
chr28:23460331-23459914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 68
               

               
Conread position:
               
85-521
               

               
Cow position:
               
chr28:21363927-21363501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 14
               

               
Conread position:
               
85-521
               

               
Cow position:
               
chr28:30293399-30293845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 14
               

               
Conread position:
               
85-537
               

               
Cow position:
               
chr28:15263531-15263995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
41, 77
               

               
Conread position:
               
86-501
               

               
Cow position:
               
chr28:11884345-11884757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 9
               

               
Conread position:
               
86-502
               

               
Cow position:
               
chr28:26340520-26340101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 79
               

               
Conread position:
               
87-263
               

               
Cow position:
               
chr28:18608180-18608360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
87-266
               

               
Cow position:
               
chr28:25827543-25827724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
87-273
               

               
Cow position:
               
chr28:7557545-7557734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
87-381
               

               
Cow position:
               
chr28:12362975-12363270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
210, 108
               

               
Conread position:
               
87-434
               

               
Cow position:
               
chr28:4440484-4440142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
35, 188
               

               
Conread position:
               
87-440
               

               
Cow position:
               
chr28:27313544-27313911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
35, 362
               

               
Conread position:
               
87-505
               

               
Cow position:
               
chr28:4913907-4914340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 115
               

               
Conread position:
               
87-510
               

               
Cow position:
               
chr28:14151411-14150991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
35, 184
               

               
Conread position:
               
87-510
               

               
Cow position:
               
chr28:24367757-24368194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
35, 103
               

               
Conread position:
               
87-521
               

               
Cow position:
               
chr28:7512396-7512849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 169
               

               
Conread position:
               
88-286
               

               
Cow position:
               
chr28:13048097-13048296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
35, 172
               

               
Conread position:
               
88-510
               

               
Cow position:
               
chr28:10745399-10744966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 86
               

               
Conread position:
               
88-510
               

               
Cow position:
               
chr28:15272086-15272504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
35, 205
               

               
Conread position:
               
88-540
               

               
Cow position:
               
chr28:22332714-22332274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 11
               

               
Conread position:
               
90-414
               

               
Cow position:
               
chr28:16405930-16405605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
69, 9
               

               
Conread position:
               
90-508
               

               
Cow position:
               
chr28:11686834-11687274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
11, 115
               

               
Conread position:
               
91-465
               

               
Cow position:
               
chr28:4138486-4138868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 157
               

               
Conread position:
               
91-510
               

               
Cow position:
               
chr28:10681641-10682061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 133
               

               
Conread position:
               
98-460
               

               
Cow position:
               
chr28:4881069-4881439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 42
               

               
Conread position:
               
98-540
               

               
Cow position:
               
chr28:25727547-25727105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
22, 53
               

               
Conread position:
               
99-362
               

               
Cow position:
               
chr28:11559460-11559724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 41
               

               
Conread position:
               
99-509
               

               
Cow position:
               
chr28:28765727-28766152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
100-266
               

               
Cow position:
               
chr28:4022848-4022680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
100-413
               

               
Cow position:
               
chr28:10863623-10863922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
24, 41
               

               
Conread position:
               
102-488
               

               
Cow position:
               
chr28:18625407-18625001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
102-509
               

               
Cow position:
               
chr28:25249527-25249113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 37
               

               
Conread position:
               
103-505
               

               
Cow position:
               
chr28:2899167-2898757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 190
               

               
Conread position:
               
106-510
               

               
Cow position:
               
chr28:25400042-25399647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 97
               

               
Conread position:
               
109-508
               

               
Cow position:
               
chr28:25763188-25762788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
16, 195
               

               
Conread position:
               
109-510
               

               
Cow position:
               
chr28:23676302-23675901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 59
               

               
Conread position:
               
113-234
               

               
Cow position:
               
chr28:8167194-8167315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
11, 29
               

               
Conread position:
               
113-440
               

               
Cow position:
               
chr28:28631896-28631559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
11, 315
               

               
Conread position:
               
113-510
               

               
Cow position:
               
chr28:16386360-16386749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 40
               

               
Conread position:
               
113-523
               

               
Cow position:
               
chr28:23793152-23793557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 29
               

               
Conread position:
               
120-434
               

               
Cow position:
               
chr28:1632502-1632816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
11, 137
               

               
Conread position:
               
121-274
               

               
Cow position:
               
chr28:12974033-12973880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
121-510
               

               
Cow position:
               
chr28:26103847-26103472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
136, 34
               

               
Conread position:
               
121-510
               

               
Cow position:
               
chr28:26533695-26533299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
207, 141
               

               
Conread position:
               
121-522
               

               
Cow position:
               
chr28:19221994-19222401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 161
               

               
Conread position:
               
122-446
               

               
Cow position:
               
chr28:25728342-25728028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
24, 44
               

               
Conread position:
               
123-376
               

               
Cow position:
               
chr28:11307367-11307612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
49, 134
               

               
Conread position:
               
123-486
               

               
Cow position:
               
chr28:25806711-25806363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
203, 27
               

               
Conread position:
               
124-233
               

               
Cow position:
               
chr28:26269535-26269426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
124-282
               

               
Cow position:
               
chr28:30081576-30081733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
124-414
               

               
Cow position:
               
chr28:9812418-9812142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
111, 22
               

               
Conread position:
               
125-397
               

               
Cow position:
               
chr28:32174780-32174507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
10, 153
               

               
Conread position:
               
125-501
               

               
Cow position:
               
chr28:17637724-17638101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
101, 67
               

               
Conread position:
               
126-375
               

               
Cow position:
               
chr28:13090385-13090632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
165, 17
               

               
Conread position:
               
127-329
               

               
Cow position:
               
chr28:17601408-17601607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
174, 0
               

               
Conread position:
               
127-477
               

               
Cow position:
               
chr28:12947095-12946727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
167, 0
               

               
Conread position:
               
127-497
               

               
Cow position:
               
chr28:14649487-14649118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
179, 40
               

               
Conread position:
               
129-508
               

               
Cow position:
               
chr28:29199874-29199486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
176, 218
               

               
Conread position:
               
129-530
               

               
Cow position:
               
chr28:3408073-3408483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
30, 81
               

               
Conread position:
               
130-497
               

               
Cow position:
               
chr28:5771505-5771139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 31
               

               
Conread position:
               
131-381
               

               
Cow position:
               
chr28:23447686-23447932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
52, 79
               

               
Conread position:
               
132-266
               

               
Cow position:
               
chr28:2743223-2743088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
22, 125
               

               
Conread position:
               
132-363
               

               
Cow position:
               
chr28:7498006-7498241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
158, 0
               

               
Conread position:
               
132-375
               

               
Cow position:
               
chr28:25195842-25195610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
192, 25
               

               
Conread position:
               
132-417
               

               
Cow position:
               
chr28:27161186-27161474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
123, 76
               

               
Conread position:
               
132-433
               

               
Cow position:
               
chr28:2752353-2752657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 173
               

               
Conread position:
               
132-452
               

               
Cow position:
               
chr28:10999538-10999852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
160, 60
               

               
Conread position:
               
132-505
               

               
Cow position:
               
chr28:26220397-26220023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 78
               

               
Conread position:
               
132-508
               

               
Cow position:
               
chr28:6971209-6971580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 19
               

               
Conread position:
               
132-510
               

               
Cow position:
               
chr28:16110078-16109701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 81
               

               
Conread position:
               
132-510
               

               
Cow position:
               
chr28:19025864-19026246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 259
               

               
Conread position:
               
132-510
               

               
Cow position:
               
chr28:31109860-31110248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 178
               

               
Conread position:
               
133-438
               

               
Cow position:
               
chr28:24693418-24693110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
139, 87
               

               
Conread position:
               
133-510
               

               
Cow position:
               
chr28:22321556-22321179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 14
               

               
Conread position:
               
133-518
               

               
Cow position:
               
chr28:25596768-25596381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 90
               

               
Conread position:
               
133-521
               

               
Cow position:
               
chr28:20313415-20313018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 22
               

               
Conread position:
               
134-510
               

               
Cow position:
               
chr28:19079706-19080091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 177
               

               
Conread position:
               
135-415
               

               
Cow position:
               
chr28:4355684-4355406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
195, 48
               

               
Conread position:
               
137-440
               

               
Cow position:
               
chr28:2131788-2132085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
153, 196
               

               
Conread position:
               
137-510
               

               
Cow position:
               
chr28:29434292-29434668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 155
               

               
Conread position:
               
138-276
               

               
Cow position:
               
chr28:23047753-23047617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
138-330
               

               
Cow position:
               
chr28:4765809-4765620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
78, 7
               

               
Conread position:
               
138-490
               

               
Cow position:
               
chr28:7865464-7865100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 20
               

               
Conread position:
               
138-510
               

               
Cow position:
               
chr28:2819910-2819515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 221
               

               
Conread position:
               
138-510
               

               
Cow position:
               
chr28:33052171-33051777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 33
               

               
Conread position:
               
139-510
               

               
Cow position:
               
chr28:21355365-21354981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 247
               

               
Conread position:
               
140-327
               

               
Cow position:
               
chr28:5650605-5650790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
69, 48
               

               
Conread position:
               
140-501
               

               
Cow position:
               
chr28:33036342-33036700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
295, 60
               

               
Conread position:
               
140-540
               

               
Cow position:
               
chr28:5817976-5817571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 173
               

               
Conread position:
               
141-353
               

               
Cow position:
               
chr28:12070363-12070154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
150, 105
               

               
Conread position:
               
141-452
               

               
Cow position:
               
chr28:18759923-18760226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
188, 64
               

               
Conread position:
               
141-494
               

               
Cow position:
               
chr28:28164217-28163864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
23, 31
               

               
Conread position:
               
141-505
               

               
Cow position:
               
chr28:11752009-11752383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 14
               

               
Conread position:
               
142-486
               

               
Cow position:
               
chr28:31248980-31248627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
28, 184
               

               
Conread position:
               
143-452
               

               
Cow position:
               
chr28:30937541-30937850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
104, 51
               

               
Conread position:
               
145-540
               

               
Cow position:
               
chr28:23410195-23410599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 158
               

               
Conread position:
               
147-460
               

               
Cow position:
               
chr28:7415884-7416202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
97, 148
               

               
Conread position:
               
148-510
               

               
Cow position:
               
chr28:14934083-14933719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 137
               

               
Conread position:
               
150-381
               

               
Cow position:
               
chr28:5166890-5166657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
178, 77
               

               
Conread position:
               
150-510
               

               
Cow position:
               
chr28:616505-616160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
11, 39
               

               
Conread position:
               
150-510
               

               
Cow position:
               
chr28:13865961-13865602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
156, 7
               

               
Conread position:
               
150-513
               

               
Cow position:
               
chr28:16085447-16085078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 11
               

               
Conread position:
               
151-350
               

               
Cow position:
               
chr28:11348544-11348351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
151-493
               

               
Cow position:
               
chr28:26685233-26684886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
102, 21
               

               
Conread position:
               
151-510
               

               
Cow position:
               
chr28:10588900-10589272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
145, 28
               

               
Conread position:
               
151-511
               

               
Cow position:
               
chr28:26922246-26922608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 85
               

               
Conread position:
               
151-540
               

               
Cow position:
               
chr28:7548936-7549338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
176, 228
               

               
Conread position:
               
152-376
               

               
Cow position:
               
chr28:17601754-17601979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
139, 127
               

               
Conread position:
               
152-508
               

               
Cow position:
               
chr28:21598130-21598494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 5
               

               
Conread position:
               
152-510
               

               
Cow position:
               
chr28:14235073-14234731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
279, 51
               

               
Conread position:
               
152-510
               

               
Cow position:
               
chr28:23007609-23007971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 236
               

               
Conread position:
               
152-540
               

               
Cow position:
               
chr28:11585081-11585484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
144, 228
               

               
Conread position:
               
153-351
               

               
Cow position:
               
chr28:25677221-25677426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
153-381
               

               
Cow position:
               
chr28:7372002-7372231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
171, 142
               

               
Conread position:
               
153-490
               

               
Cow position:
               
chr28:11817844-11818184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
40, 141
               

               
Conread position:
               
154-493
               

               
Cow position:
               
chr28:33163345-33163694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 83
               

               
Conread position:
               
155-412
               

               
Cow position:
               
chr28:22571550-22571804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
87, 79
               

               
Conread position:
               
157-467
               

               
Cow position:
               
chr28:14512649-14512325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
85, 77
               

               
Conread position:
               
157-510
               

               
Cow position:
               
chr28:13176573-13176922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
135, 77
               

               
Conread position:
               
157-510
               

               
Cow position:
               
chr28:26719459-26719117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
94, 101
               

               
Conread position:
               
157-513
               

               
Cow position:
               
chr28:10172301-10172660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
170, 54
               

               
Conread position:
               
158-442
               

               
Cow position:
               
chr28:16407199-16406922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
133, 53
               

               
Conread position:
               
160-438
               

               
Cow position:
               
chr28:32365956-32365681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
169, 11
               

               
Conread position:
               
160-521
               

               
Cow position:
               
chr28:15043749-15044109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 71
               

               
Conread position:
               
161-505
               

               
Cow position:
               
chr28:30608075-30608419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
143, 102
               

               
Conread position:
               
161-511
               

               
Cow position:
               
chr28:23230972-23231310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
161, 13
               

               
Conread position:
               
163-486
               

               
Cow position:
               
chr28:26614983-26614669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
193, 136
               

               
Conread position:
               
163-510
               

               
Cow position:
               
chr28:5128618-5128970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
37, 172
               

               
Conread position:
               
163-517
               

               
Cow position:
               
chr28:4841280-4841648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
72, 147
               

               
Conread position:
               
163-518
               

               
Cow position:
               
chr28:34561453-34561107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
143, 54
               

               
Conread position:
               
163-519
               

               
Cow position:
               
chr28:8021993-8022363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 56
               

               
Conread position:
               
164-508
               

               
Cow position:
               
chr28:2862977-2862620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 157
               

               
Conread position:
               
164-540
               

               
Cow position:
               
chr28:21380988-21380605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 24
               

               
Conread position:
               
165-452
               

               
Cow position:
               
chr28:3169081-3169374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
101, 81
               

               
Conread position:
               
165-491
               

               
Cow position:
               
chr28:4188662-4188309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
71, 231
               

               
Conread position:
               
167-425
               

               
Cow position:
               
chr28:2873025-2872765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
133, 220
               

               
Conread position:
               
167-493
               

               
Cow position:
               
chr28:7228283-7228612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
163, 10
               

               
Conread position:
               
167-522
               

               
Cow position:
               
chr28:18591376-18591012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
130, 72
               

               
Conread position:
               
168-510
               

               
Cow position:
               
chr28:11786612-11786951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 138
               

               
Conread position:
               
168-510
               

               
Cow position:
               
chr28:17358635-17358975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
115, 160
               

               
Conread position:
               
169-521
               

               
Cow position:
               
chr28:21502501-21502142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 139
               

               
Conread position:
               
171-536
               

               
Cow position:
               
chr28:7723288-7723665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
57, 17
               

               
Conread position:
               
174-509
               

               
Cow position:
               
chr28:13267888-13267539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 81
               

               
Conread position:
               
176-449
               

               
Cow position:
               
chr28:18186653-18186379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
129, 106
               

               
Conread position:
               
176-540
               

               
Cow position:
               
chr28:4536557-4536194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
8, 75
               

               
Conread position:
               
179-508
               

               
Cow position:
               
chr28:21672886-21672558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
127, 9
               

               
Conread position:
               
180-476
               

               
Cow position:
               
chr28:25283287-25282995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
236, 54
               

               
Conread position:
               
180-521
               

               
Cow position:
               
chr28:18354240-18354572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 15
               

               
Conread position:
               
181-482
               

               
Cow position:
               
chr28:24018076-24017788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
175, 70
               

               
Conread position:
               
181-510
               

               
Cow position:
               
chr28:5792800-5792459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
183-475
               

               
Cow position:
               
chr28:4098920-4098637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
59, 52
               

               
Conread position:
               
183-497
               

               
Cow position:
               
chr28:8408824-8408509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 71
               

               
Conread position:
               
185-538
               

               
Cow position:
               
chr28:16687114-16686759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
118, 23
               

               
Conread position:
               
191-517
               

               
Cow position:
               
chr28:31987696-31987352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
192-492
               

               
Cow position:
               
chr28:10529409-10529708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
185, 100
               

               
Conread position:
               
199-520
               

               
Cow position:
               
chr28:5827024-5826692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 38
               

               
Conread position:
               
200-510
               

               
Cow position:
               
chr28:25071192-25070873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
129, 77
               

               
Conread position:
               
209-510
               

               
Cow position:
               
chr28:22485317-22485005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
89, 282
               

               
Conread position:
               
209-540
               

               
Cow position:
               
chr28:12758436-12758783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
91, 105
               

               
Conread position:
               
210-511
               

               
Cow position:
               
chr28:4588160-4587856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
127, 28
               

               
Conread position:
               
211-508
               

               
Cow position:
               
chr28:7751239-7751542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
91, 26
               

               
Conread position:
               
212-485
               

               
Cow position:
               
chr28:2737745-2738030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
115, 151
               

               
Conread position:
               
213-521
               

               
Cow position:
               
chr28:3256858-3256544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
39, 44
               

               
Conread position:
               
216-508
               

               
Cow position:
               
chr28:4058039-4057745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
112, 97
               

               
Conread position:
               
222-492
               

               
Cow position:
               
chr28:18717079-18717348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
112, 78
               

               
Conread position:
               
223-526
               

               
Cow position:
               
chr28:22279150-22279442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
78, 112
               

               
Conread position:
               
224-513
               

               
Cow position:
               
chr28:17288261-17287978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
105, 17
               

               
Conread position:
               
227-510
               

               
Cow position:
               
chr28:18791059-18790768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
102, 15
               

               
Conread position:
               
231-501
               

               
Cow position:
               
chr28:5904774-5904502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
102, 54
               

               
Conread position:
               
240-510
               

               
Cow position:
               
chr28:25424261-25424545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
54, 151
               

               
Conread position:
               
241-497
               

               
Cow position:
               
chr28:26269361-26269101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
88, 11
               

               
Conread position:
               
246-426
               

               
Cow position:
               
chr28:7607949-7608133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
54, 96
               

               
Conread position:
               
246-428
               

               
Cow position:
               
chr28:7542057-7542240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
52, 6
               

               
Conread position:
               
246-467
               

               
Cow position:
               
chr28:25459559-25459325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
52, 6
               

               
Conread position:
               
246-517
               

               
Cow position:
               
chr28:8681814-8682101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
54, 6
               

               
Conread position:
               
246-518
               

               
Cow position:
               
chr28:28903638-28903906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
52, 6
               

               
Conread position:
               
246-523
               

               
Cow position:
               
chr28:25564112-25563817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
246-540
               

               
Cow position:
               
chr28:15063312-15063615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
188, 87
               

               
Conread position:
               
247-510
               

               
Cow position:
               
chr28:16252830-16253098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 251
               

               
Conread position:
               
253-440
               

               
Cow position:
               
chr28:14983276-14983086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
7, 51
               

               
Conread position:
               
254-440
               

               
Cow position:
               
chr28:118031-118218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
75, 149
               

               
Conread position:
               
254-452
               

               
Cow position:
               
chr28:19024164-19023949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
45, 103
               

               
Conread position:
               
254-497
               

               
Cow position:
               
chr28:19394638-19394400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
46, 106
               

               
Conread position:
               
254-498
               

               
Cow position:
               
chr28:7980398-7980650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
38, 77
               

               
Conread position:
               
254-500
               

               
Cow position:
               
chr28:4022407-4022149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
254-510
               

               
Cow position:
               
chr28:4880245-4880507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
29, 132
               

               
Conread position:
               
254-510
               

               
Cow position:
               
chr28:15374804-15375069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
75, 51
               

               
Conread position:
               
254-517
               

               
Cow position:
               
chr28:5773655-5773389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
73, 47
               

               
Conread position:
               
254-539
               

               
Cow position:
               
chr28:23480239-23480534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
79, 49
               

               
Conread position:
               
254-540
               

               
Cow position:
               
chr28:3751333-3751043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
55, 28
               

               
Conread position:
               
254-540
               

               
Cow position:
               
chr28:10900836-10900544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
75, 51
               

               
Conread position:
               
254-540
               

               
Cow position:
               
chr28:17316884-17316584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
123, 34
               

               
Conread position:
               
255-452
               

               
Cow position:
               
chr28:22339012-22338820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
49, 126
               

               
Conread position:
               
255-472
               

               
Cow position:
               
chr28:22739810-22739595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
74, 45
               

               
Conread position:
               
255-496
               

               
Cow position:
               
chr28:10212699-10212927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
255-508
               

               
Cow position:
               
chr28:6307910-6307651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
73, 236
               

               
Conread position:
               
255-510
               

               
Cow position:
               
chr28:24646557-24646297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
45, 80
               

               
Conread position:
               
255-517
               

               
Cow position:
               
chr28:10762679-10762424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
81, 132
               

               
Conread position:
               
256-486
               

               
Cow position:
               
chr28:10478326-10478562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
73, 56
               

               
Conread position:
               
257-510
               

               
Cow position:
               
chr28:10879785-10879532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
40, 176
               

               
Conread position:
               
258-510
               

               
Cow position:
               
chr28:22170694-22170961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
259-508
               

               
Cow position:
               
chr28:32747934-32747698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
60, 33
               

               
Conread position:
               
259-510
               

               
Cow position:
               
chr28:9390349-9390608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
70, 106
               

               
Conread position:
               
261-446
               

               
Cow position:
               
chr28:657439-657625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
41, 53
               

               
Conread position:
               
262-508
               

               
Cow position:
               
chr28:13607900-13607644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
33, 125
               

               
Conread position:
               
262-509
               

               
Cow position:
               
chr28:7590170-7590424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
71, 38
               

               
Conread position:
               
262-509
               

               
Cow position:
               
chr28:18139445-18139694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
50, 39
               

               
Conread position:
               
262-510
               

               
Cow position:
               
chr28:5769209-5768951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
73, 30
               

               
Conread position:
               
262-529
               

               
Cow position:
               
chr28:3474972-3474710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
67, 51
               

               
Conread position:
               
268-510
               

               
Cow position:
               
chr28:5805515-5805282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
186, 32
               

               
Conread position:
               
268-521
               

               
Cow position:
               
chr28:6861960-6861696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
63, 17
               

               
Conread position:
               
268-521
               

               
Cow position:
               
chr28:27428752-27428499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
24, 117
               

               
Conread position:
               
271-444
               

               
Cow position:
               
chr28:26264811-26264628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
27, 44
               

               
Conread position:
               
271-521
               

               
Cow position:
               
chr28:29455652-29455914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
42, 109
               

               
Conread position:
               
271-537
               

               
Cow position:
               
chr28:6577643-6577384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
71, 30
               

               
Conread position:
               
272-508
               

               
Cow position:
               
chr28:2905576-2905339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
28, 62
               

               
Conread position:
               
272-508
               

               
Cow position:
               
chr28:10533931-10534170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
57, 107
               

               
Conread position:
               
272-539
               

               
Cow position:
               
chr28:26784462-26784739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
57, 267
               

               
Conread position:
               
279-508
               

               
Cow position:
               
chr28:23621541-23621307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
15, 6
               

               
Conread position:
               
279-517
               

               
Cow position:
               
chr28:34082018-34082271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
11, 130
               

               
Conread position:
               
280-510
               

               
Cow position:
               
chr28:17029724-17029958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
24, 106
               

               
Conread position:
               
282-496
               

               
Cow position:
               
chr28:23776039-23775816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
24, 35
               

               
Conread position:
               
284-487
               

               
Cow position:
               
chr28:5188416-5188622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
42, 28
               

               
Conread position:
               
285-510
               

               
Cow position:
               
chr28:12048714-12048942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
44, 36
               

               
Conread position:
               
285-540
               

               
Cow position:
               
chr28:5552954-5553202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
44, 15
               

               
Conread position:
               
288-508
               

               
Cow position:
               
chr28:19222613-19222838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
40, 13
               

               
Conread position:
               
289-475
               

               
Cow position:
               
chr28:2124414-2124222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
40, 54
               

               
Conread position:
               
289-509
               

               
Cow position:
               
chr28:11380055-11380285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
11, 70
               

               
Conread position:
               
291-497
               

               
Cow position:
               
chr28:15008145-15007934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
40, 96
               

               
Conread position:
               
292-508
               

               
Cow position:
               
chr28:16243775-16244000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
9, 68
               

               
Conread position:
               
292-510
               

               
Cow position:
               
chr28:23840184-23839966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
37, 132
               

               
Conread position:
               
294-536
               

               
Cow position:
               
chr28:10642035-10642291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
16, 67
               

               
Conread position:
               
296-452
               

               
Cow position:
               
chr28:3105229-3105055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
296-493
               

               
Cow position:
               
chr28:11827467-11827267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
91, 46
               

               
Conread position:
               
296-493
               

               
Cow position:
               
chr28:13447676-13447482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
32, 116
               

               
Conread position:
               
296-510
               

               
Cow position:
               
chr28:13356597-13356828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
33, 217
               

               
Conread position:
               
298-496
               

               
Cow position:
               
chr28:7684706-7684907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
35, 60
               

               
Conread position:
               
298-496
               

               
Cow position:
               
chr28:8656763-8656965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
13, 160
               

               
Conread position:
               
298-521
               

               
Cow position:
               
chr28:8348675-8348907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
33, 87
               

               
Conread position:
               
300-521
               

               
Cow position:
               
chr28:11451489-11451724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
302-497
               

               
Cow position:
               
chr28:19295387-19295591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
21, 85
               

               
Conread position:
               
302-508
               

               
Cow position:
               
chr28:24996616-24996829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
27, 72
               

               
Conread position:
               
302-510
               

               
Cow position:
               
chr28:13241855-13242067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
27, 101
               

               
Conread position:
               
302-520
               

               
Cow position:
               
chr28:16214931-16215147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
27, 87
               

               
Conread position:
               
305-500
               

               
Cow position:
               
chr28:28076440-28076641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
24, 112
               

               
Conread position:
               
307-540
               

               
Cow position:
               
chr28:2279698-2279942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
22, 52
               

               
Conread position:
               
309-501
               

               
Cow position:
               
chr28:3077955-3077759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
20, 78
               

               
Conread position:
               
311-513
               

               
Cow position:
               
chr28:7328859-7328656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
18, 35
               

               
Conread position:
               
312-508
               

               
Cow position:
               
chr28:10888627-10888422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
17, 38
               

               
Conread position:
               
314-510
               

               
Cow position:
               
chr28:17738113-17738322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
316-504
               

               
Cow position:
               
chr28:5658510-5658317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
19, 57
               

               
Conread position:
               
321-510
               

               
Cow position:
               
chr28:22304799-22304611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
63, 100
               

               
Conread position:
               
324-436
               

               
Cow position:
               
chr28:16354658-16354769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
324-476
               

               
Cow position:
               
chr28:31971808-31971960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
17, 11
               

               
Conread position:
               
326-510
               

               
Cow position:
               
chr28:13371227-13371411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
125, 88
               

               
Conread position:
               
332-521
               

               
Cow position:
               
chr28:16441323-16441130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
119, 128
               

               
Conread position:
               
334-508
               

               
Cow position:
               
chr28:30978211-30978041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
24, 41
               

               
Conread position:
               
334-510
               

               
Cow position:
               
chr28:34636606-34636435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
24, 50
               

               
Conread position:
               
335-432
               

               
Cow position:
               
chr28:19015347-19015444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
336-505
               

               
Cow position:
               
chr28:20759984-20760162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
92, 48
               

               
Conread position:
               
337-490
               

               
Cow position:
               
chr28:2888366-2888206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
47, 105
               

               
Conread position:
               
340-508
               

               
Cow position:
               
chr28:3161138-3161321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
93, 39
               

               
Conread position:
               
341-510
               

               
Cow position:
               
chr28:32813063-32813242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
34, 132
               

               
Conread position:
               
347-521
               

               
Cow position:
               
chr28:16388556-16388386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
151, 37
               

               
Conread position:
               
349-508
               

               
Cow position:
               
chr28:8372397-8372229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
65, 35
               

               
Conread position:
               
349-508
               

               
Cow position:
               
chr28:16450780-16450936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
86, 65
               

               
Conread position:
               
351-538
               

               
Cow position:
               
chr28:3480193-3479990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
359-521
               

               
Cow position:
               
chr28:10296112-10295932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
361-538
               

               
Cow position:
               
chr28:16879362-16879540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
14, 24
               

               
Conread position:
               
362-513
               

               
Cow position:
               
chr28:3740755-3740606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
93, 22
               

               
Conread position:
               
365-497
               

               
Cow position:
               
chr28:5366221-5366360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
48, 19
               

               
Conread position:
               
369-510
               

               
Cow position:
               
chr28:12933858-12934005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
384-492
               

               
Cow position:
               
chr28:8628888-8629002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
384-505
               

               
Cow position:
               
chr28:25498611-25498742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
384-540
               

               
Cow position:
               
chr28:29952958-29953121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
30, 105
               
Show alignments to all cow chromosomes.