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Cow genome map

           
Conread name:
           
Ss1.1-rpigcf0_013818.5
        

               
Conread position:
               
14-510
               

               
Cow position:
               
chr5:22738375-22737882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
41, 14
               

               
Conread position:
               
14-510
               

               
Cow position:
               
chr5:36869011-36868522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 14
               

               
Conread position:
               
16-497
               

               
Cow position:
               
chr5:34301198-34300716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 36
               

               
Conread position:
               
19-354
               

               
Cow position:
               
chr5:43604412-43604081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
104, 17
               

               
Conread position:
               
23-521
               

               
Cow position:
               
chr5:56467963-56467467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
8, 33
               

               
Conread position:
               
27-233
               

               
Cow position:
               
chr5:29895438-29895232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
97, 127
               

               
Conread position:
               
29-536
               

               
Cow position:
               
chr5:16937765-16938256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 122
               

               
Conread position:
               
32-250
               

               
Cow position:
               
chr5:53779419-53779199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
7, 123
               

               
Conread position:
               
32-297
               

               
Cow position:
               
chr5:55965634-55965898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
90, 22
               

               
Conread position:
               
33-477
               

               
Cow position:
               
chr5:69461591-69461144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 20
               

               
Conread position:
               
33-510
               

               
Cow position:
               
chr5:28224698-28224232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
295, 14
               

               
Conread position:
               
34-219
               

               
Cow position:
               
chr5:30497751-30497572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
89, 11
               

               
Conread position:
               
34-224
               

               
Cow position:
               
chr5:20127167-20126979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
20, 43
               

               
Conread position:
               
34-381
               

               
Cow position:
               
chr5:20994830-20995186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
205, 39
               

               
Conread position:
               
34-508
               

               
Cow position:
               
chr5:40152741-40152254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 20
               

               
Conread position:
               
35-537
               

               
Cow position:
               
chr5:60715112-60715606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 29
               

               
Conread position:
               
37-227
               

               
Cow position:
               
chr5:55949419-55949612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
42, 10
               

               
Conread position:
               
37-315
               

               
Cow position:
               
chr5:39036036-39035757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
89, 32
               

               
Conread position:
               
44-278
               

               
Cow position:
               
chr5:44196676-44196913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
41, 120
               

               
Conread position:
               
44-325
               

               
Cow position:
               
chr5:8736025-8736320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
24, 117
               

               
Conread position:
               
47-307
               

               
Cow position:
               
chr5:30562174-30561919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
76, 15
               

               
Conread position:
               
49-521
               

               
Cow position:
               
chr5:48867500-48867984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
26, 105
               

               
Conread position:
               
50-327
               

               
Cow position:
               
chr5:19859994-19860276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
29, 90
               

               
Conread position:
               
50-478
               

               
Cow position:
               
chr5:52905254-52905682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
72, 21
               

               
Conread position:
               
52-233
               

               
Cow position:
               
chr5:49207087-49207266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
72, 100
               

               
Conread position:
               
52-452
               

               
Cow position:
               
chr5:45472517-45472102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
33, 42
               

               
Conread position:
               
52-504
               

               
Cow position:
               
chr5:22242530-22243002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 86
               

               
Conread position:
               
53-235
               

               
Cow position:
               
chr5:15770213-15770396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
70, 20
               

               
Conread position:
               
53-509
               

               
Cow position:
               
chr5:11667942-11668400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 103
               

               
Conread position:
               
53-511
               

               
Cow position:
               
chr5:65941008-65941477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 100
               

               
Conread position:
               
54-317
               

               
Cow position:
               
chr5:45186875-45187142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
45, 145
               

               
Conread position:
               
54-350
               

               
Cow position:
               
chr5:61456086-61455787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
54-509
               

               
Cow position:
               
chr5:39094792-39094331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 122
               

               
Conread position:
               
54-510
               

               
Cow position:
               
chr5:12873992-12873521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
56, 106
               

               
Conread position:
               
54-526
               

               
Cow position:
               
chr5:33080572-33081032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
66, 19
               

               
Conread position:
               
55-225
               

               
Cow position:
               
chr5:41530699-41530871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
68, 18
               

               
Conread position:
               
55-266
               

               
Cow position:
               
chr5:20882372-20882596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
25, 47
               

               
Conread position:
               
55-369
               

               
Cow position:
               
chr5:57755795-57756108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
65, 75
               

               
Conread position:
               
55-397
               

               
Cow position:
               
chr5:12557048-12557396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
63, 97
               

               
Conread position:
               
55-437
               

               
Cow position:
               
chr5:44446634-44447011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 89
               

               
Conread position:
               
55-440
               

               
Cow position:
               
chr5:41009768-41010139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
6, 124
               

               
Conread position:
               
55-478
               

               
Cow position:
               
chr5:4221215-4220789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 48
               

               
Conread position:
               
55-500
               

               
Cow position:
               
chr5:35969776-35969329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 14
               

               
Conread position:
               
55-505
               

               
Cow position:
               
chr5:21829103-21828646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 44
               

               
Conread position:
               
55-510
               

               
Cow position:
               
chr5:42845355-42845823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 65
               

               
Conread position:
               
55-517
               

               
Cow position:
               
chr5:55232583-55233009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
28, 8
               

               
Conread position:
               
55-521
               

               
Cow position:
               
chr5:43858181-43858665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 18
               

               
Conread position:
               
56-226
               

               
Cow position:
               
chr5:62996196-62996025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
67, 7
               

               
Conread position:
               
56-508
               

               
Cow position:
               
chr5:25035016-25035448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 177
               

               
Conread position:
               
56-521
               

               
Cow position:
               
chr5:43922934-43923382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 16
               

               
Conread position:
               
57-505
               

               
Cow position:
               
chr5:9893890-9894345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 16
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr5:56643304-56643136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
77, 68
               

               
Conread position:
               
58-227
               

               
Cow position:
               
chr5:26149268-26149101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
65, 17
               

               
Conread position:
               
58-250
               

               
Cow position:
               
chr5:24915287-24915483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
58-291
               

               
Cow position:
               
chr5:7177385-7177154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
65, 10
               

               
Conread position:
               
58-312
               

               
Cow position:
               
chr5:29829651-29829912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
64, 251
               

               
Conread position:
               
58-320
               

               
Cow position:
               
chr5:23209192-23208930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
70, 10
               

               
Conread position:
               
58-327
               

               
Cow position:
               
chr5:33273931-33273658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
65, 13
               

               
Conread position:
               
58-370
               

               
Cow position:
               
chr5:57372044-57371722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
21, 265
               

               
Conread position:
               
58-405
               

               
Cow position:
               
chr5:60016399-60016055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
65, 25
               

               
Conread position:
               
58-439
               

               
Cow position:
               
chr5:35246874-35247256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 30
               

               
Conread position:
               
58-501
               

               
Cow position:
               
chr5:12322575-12323015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 65
               

               
Conread position:
               
58-505
               

               
Cow position:
               
chr5:64321995-64321530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 13
               

               
Conread position:
               
58-509
               

               
Cow position:
               
chr5:39937353-39936881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 178
               

               
Conread position:
               
58-521
               

               
Cow position:
               
chr5:58696-59165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 11
               

               
Conread position:
               
58-521
               

               
Cow position:
               
chr5:58144370-58144839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
65, 15
               

               
Conread position:
               
58-521
               

               
Cow position:
               
chr5:72903002-72903461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 70
               

               
Conread position:
               
59-227
               

               
Cow position:
               
chr5:43611935-43611765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
25, 41
               

               
Conread position:
               
59-235
               

               
Cow position:
               
chr5:73424443-73424622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
58, 12
               

               
Conread position:
               
59-330
               

               
Cow position:
               
chr5:20288023-20288299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
64, 222
               

               
Conread position:
               
59-471
               

               
Cow position:
               
chr5:46512533-46512951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 43
               

               
Conread position:
               
59-505
               

               
Cow position:
               
chr5:57934887-57935332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 14
               

               
Conread position:
               
59-508
               

               
Cow position:
               
chr5:3772077-3771625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 78
               

               
Conread position:
               
59-509
               

               
Cow position:
               
chr5:66339308-66338862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
54, 67
               

               
Conread position:
               
60-217
               

               
Cow position:
               
chr5:56624280-56624440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
60-267
               

               
Cow position:
               
chr5:49821664-49821455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
63, 13
               

               
Conread position:
               
60-298
               

               
Cow position:
               
chr5:69383485-69383251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
60, 82
               

               
Conread position:
               
60-370
               

               
Cow position:
               
chr5:49668717-49668400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
60-490
               

               
Cow position:
               
chr5:23168591-23169022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 62
               

               
Conread position:
               
60-508
               

               
Cow position:
               
chr5:56071094-56070632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 99
               

               
Conread position:
               
60-510
               

               
Cow position:
               
chr5:20128287-20127831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 12
               

               
Conread position:
               
60-510
               

               
Cow position:
               
chr5:65776143-65776609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 251
               

               
Conread position:
               
63-294
               

               
Cow position:
               
chr5:52138172-52137935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
63-350
               

               
Cow position:
               
chr5:63241210-63240918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
60, 255
               

               
Conread position:
               
63-505
               

               
Cow position:
               
chr5:62172627-62172200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
273, 10
               

               
Conread position:
               
63-508
               

               
Cow position:
               
chr5:32338727-32339196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 117
               

               
Conread position:
               
64-298
               

               
Cow position:
               
chr5:74039776-74040007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
60, 89
               

               
Conread position:
               
64-497
               

               
Cow position:
               
chr5:38833344-38832910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 32
               

               
Conread position:
               
64-508
               

               
Cow position:
               
chr5:50822009-50821567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 12
               

               
Conread position:
               
64-510
               

               
Cow position:
               
chr5:72045447-72045864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
59, 27
               

               
Conread position:
               
69-298
               

               
Cow position:
               
chr5:18062085-18062323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
69-327
               

               
Cow position:
               
chr5:37983397-37983131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
15, 233
               

               
Conread position:
               
69-510
               

               
Cow position:
               
chr5:14314742-14314299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 58
               

               
Conread position:
               
70-220
               

               
Cow position:
               
chr5:24464962-24464820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
70-225
               

               
Cow position:
               
chr5:24108834-24108991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
70-227
               

               
Cow position:
               
chr5:51012224-51012066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
53, 106
               

               
Conread position:
               
70-250
               

               
Cow position:
               
chr5:16185604-16185422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
70-250
               

               
Cow position:
               
chr5:43839773-43839955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
70-294
               

               
Cow position:
               
chr5:61049558-61049332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
70-330
               

               
Cow position:
               
chr5:50101154-50101413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
53, 75
               

               
Conread position:
               
70-407
               

               
Cow position:
               
chr5:37255109-37255445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
50, 246
               

               
Conread position:
               
70-427
               

               
Cow position:
               
chr5:18289342-18288995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 72
               

               
Conread position:
               
70-432
               

               
Cow position:
               
chr5:19335553-19335929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
70-477
               

               
Cow position:
               
chr5:4322637-4322220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
53, 92
               

               
Conread position:
               
70-493
               

               
Cow position:
               
chr5:4280668-4280257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 71
               

               
Conread position:
               
70-510
               

               
Cow position:
               
chr5:35208487-35208038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 172
               

               
Conread position:
               
70-510
               

               
Cow position:
               
chr5:53055335-53055776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 286
               

               
Conread position:
               
70-540
               

               
Cow position:
               
chr5:58519192-58519655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 27
               

               
Conread position:
               
71-225
               

               
Cow position:
               
chr5:54712845-54712996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
52, 128
               

               
Conread position:
               
71-227
               

               
Cow position:
               
chr5:63939835-63939994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
52, 152
               

               
Conread position:
               
71-275
               

               
Cow position:
               
chr5:54312822-54312620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
40, 9
               

               
Conread position:
               
71-439
               

               
Cow position:
               
chr5:70951669-70952021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
13, 78
               

               
Conread position:
               
71-493
               

               
Cow position:
               
chr5:51053425-51053854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 31
               

               
Conread position:
               
71-500
               

               
Cow position:
               
chr5:55966650-55967096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 112
               

               
Conread position:
               
71-508
               

               
Cow position:
               
chr5:24995998-24996445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 148
               

               
Conread position:
               
71-510
               

               
Cow position:
               
chr5:25495128-25495561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
52, 28
               

               
Conread position:
               
72-410
               

               
Cow position:
               
chr5:22667292-22666976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
48, 67
               

               
Conread position:
               
73-225
               

               
Cow position:
               
chr5:57086841-57086994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
51, 86
               

               
Conread position:
               
73-233
               

               
Cow position:
               
chr5:34918564-34918407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
50, 74
               

               
Conread position:
               
73-257
               

               
Cow position:
               
chr5:40122387-40122573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
73-272
               

               
Cow position:
               
chr5:35190327-35190132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
50, 72
               

               
Conread position:
               
73-281
               

               
Cow position:
               
chr5:2240768-2240976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
42, 181
               

               
Conread position:
               
73-298
               

               
Cow position:
               
chr5:46540839-46541059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
51, 74
               

               
Conread position:
               
73-298
               

               
Cow position:
               
chr5:56548787-56548568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
47, 62
               

               
Conread position:
               
73-298
               

               
Cow position:
               
chr5:60514804-60515032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
24, 139
               

               
Conread position:
               
73-300
               

               
Cow position:
               
chr5:17105066-17104848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
50, 63
               

               
Conread position:
               
73-323
               

               
Cow position:
               
chr5:51298494-51298744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
51, 77
               

               
Conread position:
               
73-333
               

               
Cow position:
               
chr5:26548922-26549180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
50, 79
               

               
Conread position:
               
73-381
               

               
Cow position:
               
chr5:71015664-71015969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
177, 222
               

               
Conread position:
               
73-383
               

               
Cow position:
               
chr5:61914792-61914479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
50, 221
               

               
Conread position:
               
73-440
               

               
Cow position:
               
chr5:66972651-66972281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 48
               

               
Conread position:
               
73-452
               

               
Cow position:
               
chr5:56014943-56014571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
227, 50
               

               
Conread position:
               
73-470
               

               
Cow position:
               
chr5:34625169-34624785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
50, 69
               

               
Conread position:
               
73-482
               

               
Cow position:
               
chr5:34562230-34561813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 48
               

               
Conread position:
               
73-491
               

               
Cow position:
               
chr5:7044485-7044915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 72
               

               
Conread position:
               
73-494
               

               
Cow position:
               
chr5:30628931-30629361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 106
               

               
Conread position:
               
73-496
               

               
Cow position:
               
chr5:47602029-47601607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 77
               

               
Conread position:
               
73-501
               

               
Cow position:
               
chr5:44796515-44796932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 73
               

               
Conread position:
               
73-505
               

               
Cow position:
               
chr5:2309337-2309783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 69
               

               
Conread position:
               
73-505
               

               
Cow position:
               
chr5:72895907-72895474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 86
               

               
Conread position:
               
73-508
               

               
Cow position:
               
chr5:35685154-35684713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 22
               

               
Conread position:
               
73-508
               

               
Cow position:
               
chr5:41165303-41164867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 53
               

               
Conread position:
               
73-508
               

               
Cow position:
               
chr5:56028324-56028751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 74
               

               
Conread position:
               
73-510
               

               
Cow position:
               
chr5:30253961-30253522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 60
               

               
Conread position:
               
73-510
               

               
Cow position:
               
chr5:39447304-39447755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 273
               

               
Conread position:
               
73-510
               

               
Cow position:
               
chr5:40109705-40109278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 53
               

               
Conread position:
               
73-510
               

               
Cow position:
               
chr5:44847806-44848240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 78
               

               
Conread position:
               
73-510
               

               
Cow position:
               
chr5:64175909-64176344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 69
               

               
Conread position:
               
73-512
               

               
Cow position:
               
chr5:53835942-53835488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 145
               

               
Conread position:
               
73-521
               

               
Cow position:
               
chr5:16893557-16894013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 50
               

               
Conread position:
               
73-521
               

               
Cow position:
               
chr5:26467848-26467383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 26
               

               
Conread position:
               
73-521
               

               
Cow position:
               
chr5:35763465-35763053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
50, 26
               

               
Conread position:
               
73-521
               

               
Cow position:
               
chr5:69338035-69337595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 48
               

               
Conread position:
               
73-537
               

               
Cow position:
               
chr5:21617676-21617204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 69
               

               
Conread position:
               
73-537
               

               
Cow position:
               
chr5:45845469-45845944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 79
               

               
Conread position:
               
73-540
               

               
Cow position:
               
chr5:30276908-30276439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 78
               

               
Conread position:
               
74-332
               

               
Cow position:
               
chr5:22795427-22795176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
10, 30
               

               
Conread position:
               
74-402
               

               
Cow position:
               
chr5:14920705-14921039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
10, 89
               

               
Conread position:
               
74-424
               

               
Cow position:
               
chr5:33560517-33560865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 53
               

               
Conread position:
               
74-500
               

               
Cow position:
               
chr5:30303102-30302685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 92
               

               
Conread position:
               
74-510
               

               
Cow position:
               
chr5:11229450-11229897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 77
               

               
Conread position:
               
74-510
               

               
Cow position:
               
chr5:17086797-17087253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
42, 88
               

               
Conread position:
               
74-510
               

               
Cow position:
               
chr5:26132874-26133297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
10, 230
               

               
Conread position:
               
74-533
               

               
Cow position:
               
chr5:8023994-8024435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 30
               

               
Conread position:
               
76-224
               

               
Cow position:
               
chr5:29599334-29599476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
47, 69
               

               
Conread position:
               
76-233
               

               
Cow position:
               
chr5:21721257-21721409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
48, 23
               

               
Conread position:
               
76-283
               

               
Cow position:
               
chr5:60948350-60948144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
47, 76
               

               
Conread position:
               
76-296
               

               
Cow position:
               
chr5:34914836-34915055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
35, 70
               

               
Conread position:
               
76-374
               

               
Cow position:
               
chr5:34108839-34109141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
42, 140
               

               
Conread position:
               
76-486
               

               
Cow position:
               
chr5:50600264-50599858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 65
               

               
Conread position:
               
76-508
               

               
Cow position:
               
chr5:74643466-74643882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
255, 50
               

               
Conread position:
               
76-512
               

               
Cow position:
               
chr5:30845324-30844885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 63
               

               
Conread position:
               
76-521
               

               
Cow position:
               
chr5:55177098-55176653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 38
               

               
Conread position:
               
77-250
               

               
Cow position:
               
chr5:51233806-51233975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
7, 23
               

               
Conread position:
               
77-322
               

               
Cow position:
               
chr5:62812044-62811796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
46, 183
               

               
Conread position:
               
77-440
               

               
Cow position:
               
chr5:52668256-52667884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
46, 128
               

               
Conread position:
               
80-265
               

               
Cow position:
               
chr5:5016636-5016458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
11, 63
               

               
Conread position:
               
80-417
               

               
Cow position:
               
chr5:57419582-57419917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 46
               

               
Conread position:
               
80-510
               

               
Cow position:
               
chr5:50482644-50483085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
43, 220
               

               
Conread position:
               
81-296
               

               
Cow position:
               
chr5:15364484-15364267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
42, 141
               

               
Conread position:
               
81-429
               

               
Cow position:
               
chr5:50858149-50857801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
43, 163
               

               
Conread position:
               
81-478
               

               
Cow position:
               
chr5:5856073-5855688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 208
               

               
Conread position:
               
81-510
               

               
Cow position:
               
chr5:37941594-37942016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 64
               

               
Conread position:
               
83-217
               

               
Cow position:
               
chr5:45854712-45854574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
83-224
               

               
Cow position:
               
chr5:59335984-59335840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
83-225
               

               
Cow position:
               
chr5:2355729-2355589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
23, 34
               

               
Conread position:
               
83-225
               

               
Cow position:
               
chr5:14454255-14454110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
83-225
               

               
Cow position:
               
chr5:30221566-30221709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
41, 81
               

               
Conread position:
               
83-225
               

               
Cow position:
               
chr5:36143189-36143053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
40, 18
               

               
Conread position:
               
83-225
               

               
Cow position:
               
chr5:54340977-54340835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
40, 9
               

               
Conread position:
               
83-225
               

               
Cow position:
               
chr5:56525499-56525643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
83-226
               

               
Cow position:
               
chr5:31648626-31648487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
40, 62
               

               
Conread position:
               
83-226
               

               
Cow position:
               
chr5:51800398-51800543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
58, 77
               

               
Conread position:
               
83-227
               

               
Cow position:
               
chr5:19561235-19561381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
83-227
               

               
Cow position:
               
chr5:30492580-30492727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
83-227
               

               
Cow position:
               
chr5:57399040-57399186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
83-227
               

               
Cow position:
               
chr5:57447453-57447599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
83-233
               

               
Cow position:
               
chr5:38040357-38040503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
40, 62
               

               
Conread position:
               
83-233
               

               
Cow position:
               
chr5:60207916-60207769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
37, 56
               

               
Conread position:
               
83-234
               

               
Cow position:
               
chr5:59662846-59662998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
40, 76
               

               
Conread position:
               
83-234
               

               
Cow position:
               
chr5:69682136-69682289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
83-235
               

               
Cow position:
               
chr5:17987682-17987835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
41, 121
               

               
Conread position:
               
83-250
               

               
Cow position:
               
chr5:6695760-6695591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
40, 106
               

               
Conread position:
               
83-263
               

               
Cow position:
               
chr5:53980541-53980723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
83-264
               

               
Cow position:
               
chr5:20812760-20812576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
40, 123
               

               
Conread position:
               
83-266
               

               
Cow position:
               
chr5:54753038-54753224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
40, 178
               

               
Conread position:
               
83-273
               

               
Cow position:
               
chr5:46063705-46063518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
83-275
               

               
Cow position:
               
chr5:3743537-3743341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
40, 93
               

               
Conread position:
               
83-275
               

               
Cow position:
               
chr5:66659725-66659528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
83-278
               

               
Cow position:
               
chr5:65552510-65552695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
37, 19
               

               
Conread position:
               
83-282
               

               
Cow position:
               
chr5:12300121-12299923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
78, 38
               

               
Conread position:
               
83-283
               

               
Cow position:
               
chr5:17828266-17828468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
83-294
               

               
Cow position:
               
chr5:44163162-44163369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
156, 30
               

               
Conread position:
               
83-298
               

               
Cow position:
               
chr5:60523938-60523729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
40, 59
               

               
Conread position:
               
83-299
               

               
Cow position:
               
chr5:52853178-52852966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
40, 63
               

               
Conread position:
               
83-325
               

               
Cow position:
               
chr5:31052599-31052355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
107, 38
               

               
Conread position:
               
83-326
               

               
Cow position:
               
chr5:55783750-55783978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
39, 146
               

               
Conread position:
               
83-330
               

               
Cow position:
               
chr5:30247314-30247555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
40, 93
               

               
Conread position:
               
83-331
               

               
Cow position:
               
chr5:72006286-72006529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
81, 19
               

               
Conread position:
               
83-339
               

               
Cow position:
               
chr5:48867259-48867504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
40, 73
               

               
Conread position:
               
83-354
               

               
Cow position:
               
chr5:7012638-7012910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
40, 100
               

               
Conread position:
               
83-364
               

               
Cow position:
               
chr5:63234612-63234898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
40, 81
               

               
Conread position:
               
83-371
               

               
Cow position:
               
chr5:19752512-19752226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
40, 52
               

               
Conread position:
               
83-372
               

               
Cow position:
               
chr5:70271078-70270785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
41, 66
               

               
Conread position:
               
83-380
               

               
Cow position:
               
chr5:43403120-43402812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
40, 96
               

               
Conread position:
               
83-381
               

               
Cow position:
               
chr5:33834251-33833955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
40, 72
               

               
Conread position:
               
83-381
               

               
Cow position:
               
chr5:57526716-57527007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
37, 116
               

               
Conread position:
               
83-386
               

               
Cow position:
               
chr5:59384475-59384784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
34, 157
               

               
Conread position:
               
83-388
               

               
Cow position:
               
chr5:25366310-25365994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
40, 12
               

               
Conread position:
               
83-391
               

               
Cow position:
               
chr5:30233121-30232801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
40, 112
               

               
Conread position:
               
83-397
               

               
Cow position:
               
chr5:35228933-35229233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
41, 13
               

               
Conread position:
               
83-398
               

               
Cow position:
               
chr5:53947110-53946790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 306
               

               
Conread position:
               
83-405
               

               
Cow position:
               
chr5:71845715-71846036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
40, 16
               

               
Conread position:
               
83-407
               

               
Cow position:
               
chr5:49474343-49474659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
40, 76
               

               
Conread position:
               
83-408
               

               
Cow position:
               
chr5:12902130-12901800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 198
               

               
Conread position:
               
83-409
               

               
Cow position:
               
chr5:70678434-70678747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
40, 79
               

               
Conread position:
               
83-412
               

               
Cow position:
               
chr5:7057186-7057525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 136
               

               
Conread position:
               
83-424
               

               
Cow position:
               
chr5:64140749-64140399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
40, 72
               

               
Conread position:
               
83-427
               

               
Cow position:
               
chr5:50684451-50684123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
37, 101
               

               
Conread position:
               
83-431
               

               
Cow position:
               
chr5:36650766-36650413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
39, 213
               

               
Conread position:
               
83-432
               

               
Cow position:
               
chr5:62107273-62107630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
40, 200
               

               
Conread position:
               
83-433
               

               
Cow position:
               
chr5:74580997-74580656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
37, 8
               

               
Conread position:
               
83-434
               

               
Cow position:
               
chr5:29097573-29097218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 52
               

               
Conread position:
               
83-436
               

               
Cow position:
               
chr5:73167803-73168140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
40, 66
               

               
Conread position:
               
83-440
               

               
Cow position:
               
chr5:12673269-12673606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
40, 71
               

               
Conread position:
               
83-440
               

               
Cow position:
               
chr5:19778355-19778726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
37, 99
               

               
Conread position:
               
83-440
               

               
Cow position:
               
chr5:55956121-55955763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 64
               

               
Conread position:
               
83-449
               

               
Cow position:
               
chr5:45397776-45397418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 19
               

               
Conread position:
               
83-449
               

               
Cow position:
               
chr5:66582181-66581803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 101
               

               
Conread position:
               
83-450
               

               
Cow position:
               
chr5:11539841-11540205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 114
               

               
Conread position:
               
83-461
               

               
Cow position:
               
chr5:54048139-54048520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
40, 221
               

               
Conread position:
               
83-473
               

               
Cow position:
               
chr5:57767777-57768151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 16
               

               
Conread position:
               
83-478
               

               
Cow position:
               
chr5:17371484-17371892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
41, 218
               

               
Conread position:
               
83-482
               

               
Cow position:
               
chr5:63647266-63647670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
40, 122
               

               
Conread position:
               
83-485
               

               
Cow position:
               
chr5:14903855-14904271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 30
               

               
Conread position:
               
83-493
               

               
Cow position:
               
chr5:3242284-3242680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
27, 87
               

               
Conread position:
               
83-493
               

               
Cow position:
               
chr5:17062868-17063300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 197
               

               
Conread position:
               
83-496
               

               
Cow position:
               
chr5:66257845-66257433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 37
               

               
Conread position:
               
83-500
               

               
Cow position:
               
chr5:26262474-26262887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 37
               

               
Conread position:
               
83-502
               

               
Cow position:
               
chr5:35235476-35235924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 233
               

               
Conread position:
               
83-508
               

               
Cow position:
               
chr5:29352921-29353350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
211, 41
               

               
Conread position:
               
83-509
               

               
Cow position:
               
chr5:67932255-67932683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 158
               

               
Conread position:
               
83-510
               

               
Cow position:
               
chr5:14550371-14550809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 211
               

               
Conread position:
               
83-510
               

               
Cow position:
               
chr5:19278492-19278915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 97
               

               
Conread position:
               
83-510
               

               
Cow position:
               
chr5:22565830-22565414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
43, 33
               

               
Conread position:
               
83-510
               

               
Cow position:
               
chr5:29828259-29827830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 105
               

               
Conread position:
               
83-510
               

               
Cow position:
               
chr5:32975347-32975774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 139
               

               
Conread position:
               
83-510
               

               
Cow position:
               
chr5:47756983-47756545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
40, 81
               

               
Conread position:
               
83-510
               

               
Cow position:
               
chr5:47870843-47871274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 38
               

               
Conread position:
               
83-510
               

               
Cow position:
               
chr5:52164962-52165405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 113
               

               
Conread position:
               
83-510
               

               
Cow position:
               
chr5:54875482-54875903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
40, 90
               

               
Conread position:
               
83-510
               

               
Cow position:
               
chr5:68605074-68604636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
39, 164
               

               
Conread position:
               
83-513
               

               
Cow position:
               
chr5:68719078-68718657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
34, 75
               

               
Conread position:
               
83-515
               

               
Cow position:
               
chr5:20779188-20779611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 69
               

               
Conread position:
               
83-519
               

               
Cow position:
               
chr5:37646286-37645841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
41, 49
               

               
Conread position:
               
83-521
               

               
Cow position:
               
chr5:1247474-1247042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
83-521
               

               
Cow position:
               
chr5:50723259-50722813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 210
               

               
Conread position:
               
83-531
               

               
Cow position:
               
chr5:37065310-37064846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
41, 93
               

               
Conread position:
               
83-537
               

               
Cow position:
               
chr5:33414197-33414656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 142
               

               
Conread position:
               
83-537
               

               
Cow position:
               
chr5:42064418-42063952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 364
               

               
Conread position:
               
83-539
               

               
Cow position:
               
chr5:18574393-18573919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 148
               

               
Conread position:
               
83-539
               

               
Cow position:
               
chr5:57328008-57327534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
40, 54
               

               
Conread position:
               
83-540
               

               
Cow position:
               
chr5:26097501-26097041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 80
               

               
Conread position:
               
83-540
               

               
Cow position:
               
chr5:45706247-45705791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
39, 178
               

               
Conread position:
               
83-540
               

               
Cow position:
               
chr5:47316764-47317224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 16
               

               
Conread position:
               
83-540
               

               
Cow position:
               
chr5:60209935-60210395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
211, 42
               

               
Conread position:
               
84-228
               

               
Cow position:
               
chr5:9486873-9487019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
84-259
               

               
Cow position:
               
chr5:31527183-31527358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
38, 16
               

               
Conread position:
               
84-267
               

               
Cow position:
               
chr5:34288044-34288223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
39, 78
               

               
Conread position:
               
84-317
               

               
Cow position:
               
chr5:34347523-34347751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
39, 136
               

               
Conread position:
               
84-330
               

               
Cow position:
               
chr5:52001414-52001656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
39, 16
               

               
Conread position:
               
84-335
               

               
Cow position:
               
chr5:44810027-44810277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
39, 225
               

               
Conread position:
               
84-361
               

               
Cow position:
               
chr5:41935445-41935726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
39, 116
               

               
Conread position:
               
84-365
               

               
Cow position:
               
chr5:37090427-37090712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
39, 93
               

               
Conread position:
               
84-367
               

               
Cow position:
               
chr5:57994670-57994939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
38, 16
               

               
Conread position:
               
84-427
               

               
Cow position:
               
chr5:991684-991332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
38, 68
               

               
Conread position:
               
84-433
               

               
Cow position:
               
chr5:12760910-12761256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
34, 75
               

               
Conread position:
               
84-440
               

               
Cow position:
               
chr5:54751018-54750690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
39, 61
               

               
Conread position:
               
84-497
               

               
Cow position:
               
chr5:55756203-55756650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
84-510
               

               
Cow position:
               
chr5:64523654-64524103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
36, 75
               

               
Conread position:
               
84-523
               

               
Cow position:
               
chr5:32394812-32394364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 66
               

               
Conread position:
               
85-227
               

               
Cow position:
               
chr5:25598038-25597899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
38, 65
               

               
Conread position:
               
85-266
               

               
Cow position:
               
chr5:30035278-30035095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
85-282
               

               
Cow position:
               
chr5:51920499-51920300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
85-284
               

               
Cow position:
               
chr5:64060655-64060456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
39, 70
               

               
Conread position:
               
85-297
               

               
Cow position:
               
chr5:35513430-35513211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
85-297
               

               
Cow position:
               
chr5:70749977-70750188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
38, 121
               

               
Conread position:
               
85-309
               

               
Cow position:
               
chr5:22091551-22091786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
85-326
               

               
Cow position:
               
chr5:61007273-61007034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
37, 14
               

               
Conread position:
               
85-332
               

               
Cow position:
               
chr5:56059855-56060104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
25, 221
               

               
Conread position:
               
85-354
               

               
Cow position:
               
chr5:56136711-56136983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
58, 45
               

               
Conread position:
               
85-374
               

               
Cow position:
               
chr5:11769481-11769187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
38, 152
               

               
Conread position:
               
85-374
               

               
Cow position:
               
chr5:19972793-19973095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
85-381
               

               
Cow position:
               
chr5:16939383-16939668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
38, 217
               

               
Conread position:
               
85-409
               

               
Cow position:
               
chr5:61999347-61999658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
37, 162
               

               
Conread position:
               
85-440
               

               
Cow position:
               
chr5:59631696-59631339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
38, 228
               

               
Conread position:
               
85-490
               

               
Cow position:
               
chr5:34976630-34977039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
38, 219
               

               
Conread position:
               
85-493
               

               
Cow position:
               
chr5:3582764-3582378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
38, 67
               

               
Conread position:
               
85-504
               

               
Cow position:
               
chr5:55942168-55942615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 319
               

               
Conread position:
               
85-510
               

               
Cow position:
               
chr5:6838869-6839302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
35, 213
               

               
Conread position:
               
85-510
               

               
Cow position:
               
chr5:32153102-32153539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 236
               

               
Conread position:
               
85-510
               

               
Cow position:
               
chr5:61726166-61725747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
250, 50
               

               
Conread position:
               
85-510
               

               
Cow position:
               
chr5:65764919-65765335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
41, 14
               

               
Conread position:
               
85-517
               

               
Cow position:
               
chr5:17999287-17999729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 47
               

               
Conread position:
               
85-536
               

               
Cow position:
               
chr5:35826807-35826338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
26, 57
               

               
Conread position:
               
85-537
               

               
Cow position:
               
chr5:47888519-47888966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
38, 93
               

               
Conread position:
               
86-377
               

               
Cow position:
               
chr5:64555739-64555448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
36, 194
               

               
Conread position:
               
86-399
               

               
Cow position:
               
chr5:64168029-64168346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
37, 145
               

               
Conread position:
               
86-400
               

               
Cow position:
               
chr5:43370985-43371305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
37, 184
               

               
Conread position:
               
86-440
               

               
Cow position:
               
chr5:35459088-35459437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
37, 60
               

               
Conread position:
               
86-476
               

               
Cow position:
               
chr5:57591892-57591501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
37, 89
               

               
Conread position:
               
86-513
               

               
Cow position:
               
chr5:28330133-28330558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 218
               

               
Conread position:
               
86-540
               

               
Cow position:
               
chr5:65753068-65752603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 74
               

               
Conread position:
               
87-309
               

               
Cow position:
               
chr5:30266678-30266903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
87-315
               

               
Cow position:
               
chr5:37713445-37713676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
87-327
               

               
Cow position:
               
chr5:49501611-49501857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
87-354
               

               
Cow position:
               
chr5:20843191-20843462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
33, 65
               

               
Conread position:
               
87-433
               

               
Cow position:
               
chr5:64697995-64697644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
36, 160
               

               
Conread position:
               
87-441
               

               
Cow position:
               
chr5:44028545-44028889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
35, 75
               

               
Conread position:
               
87-452
               

               
Cow position:
               
chr5:30178295-30178674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
87-477
               

               
Cow position:
               
chr5:74610493-74610882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
35, 136
               

               
Conread position:
               
87-496
               

               
Cow position:
               
chr5:48154256-48154682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
87-508
               

               
Cow position:
               
chr5:1104670-1105092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
36, 215
               

               
Conread position:
               
87-508
               

               
Cow position:
               
chr5:41302869-41303312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
33, 298
               

               
Conread position:
               
87-510
               

               
Cow position:
               
chr5:3282044-3281608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 232
               

               
Conread position:
               
87-510
               

               
Cow position:
               
chr5:27179872-27179431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
41, 89
               

               
Conread position:
               
87-510
               

               
Cow position:
               
chr5:34505717-34506149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 274
               

               
Conread position:
               
87-510
               

               
Cow position:
               
chr5:38853558-38853136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
33, 199
               

               
Conread position:
               
87-510
               

               
Cow position:
               
chr5:40889088-40889507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 221
               

               
Conread position:
               
87-510
               

               
Cow position:
               
chr5:45225613-45226047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 63
               

               
Conread position:
               
87-510
               

               
Cow position:
               
chr5:61576754-61576316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 229
               

               
Conread position:
               
87-510
               

               
Cow position:
               
chr5:61600614-61600189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
35, 110
               

               
Conread position:
               
87-513
               

               
Cow position:
               
chr5:64137465-64137025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
87-517
               

               
Cow position:
               
chr5:60952869-60952428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
35, 169
               

               
Conread position:
               
88-330
               

               
Cow position:
               
chr5:45405252-45405006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
35, 212
               

               
Conread position:
               
88-433
               

               
Cow position:
               
chr5:65967527-65967868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
37, 59
               

               
Conread position:
               
88-540
               

               
Cow position:
               
chr5:31469385-31469839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 176
               

               
Conread position:
               
89-330
               

               
Cow position:
               
chr5:61784520-61784763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
34, 145
               

               
Conread position:
               
89-485
               

               
Cow position:
               
chr5:50942957-50943352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
34, 53
               

               
Conread position:
               
91-332
               

               
Cow position:
               
chr5:60741448-60741207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
35, 71
               

               
Conread position:
               
91-344
               

               
Cow position:
               
chr5:37895198-37894940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
31, 227
               

               
Conread position:
               
91-429
               

               
Cow position:
               
chr5:64026812-64027144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
33, 204
               

               
Conread position:
               
91-440
               

               
Cow position:
               
chr5:57265699-57266040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
31, 225
               

               
Conread position:
               
91-476
               

               
Cow position:
               
chr5:52040118-52040509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 190
               

               
Conread position:
               
91-493
               

               
Cow position:
               
chr5:59081989-59082402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
32, 223
               

               
Conread position:
               
91-496
               

               
Cow position:
               
chr5:71158078-71158473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
31, 51
               

               
Conread position:
               
91-510
               

               
Cow position:
               
chr5:4506760-4507184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 196
               

               
Conread position:
               
91-523
               

               
Cow position:
               
chr5:48829358-48828911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 65
               

               
Conread position:
               
91-537
               

               
Cow position:
               
chr5:5938529-5938073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 204
               

               
Conread position:
               
93-476
               

               
Cow position:
               
chr5:48009655-48010036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
42, 46
               

               
Conread position:
               
93-510
               

               
Cow position:
               
chr5:47703924-47704358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 92
               

               
Conread position:
               
93-540
               

               
Cow position:
               
chr5:21525362-21524908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
29, 80
               

               
Conread position:
               
94-510
               

               
Cow position:
               
chr5:68872395-68871969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 122
               

               
Conread position:
               
96-296
               

               
Cow position:
               
chr5:2469012-2469209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
24, 103
               

               
Conread position:
               
96-348
               

               
Cow position:
               
chr5:55795772-55796017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
28, 43
               

               
Conread position:
               
98-505
               

               
Cow position:
               
chr5:57074136-57074553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 60
               

               
Conread position:
               
98-510
               

               
Cow position:
               
chr5:64139753-64139340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
329, 15
               

               
Conread position:
               
99-243
               

               
Cow position:
               
chr5:62011880-62011734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
99-321
               

               
Cow position:
               
chr5:2827573-2827347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
23, 130
               

               
Conread position:
               
99-343
               

               
Cow position:
               
chr5:30419172-30418923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
23, 217
               

               
Conread position:
               
99-496
               

               
Cow position:
               
chr5:11427038-11427451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 71
               

               
Conread position:
               
100-225
               

               
Cow position:
               
chr5:22102752-22102627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
20, 52
               

               
Conread position:
               
100-390
               

               
Cow position:
               
chr5:46681524-46681812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
23, 84
               

               
Conread position:
               
100-510
               

               
Cow position:
               
chr5:28302557-28302963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 36
               

               
Conread position:
               
103-509
               

               
Cow position:
               
chr5:66366700-66366309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 68
               

               
Conread position:
               
104-465
               

               
Cow position:
               
chr5:44028115-44028480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 132
               

               
Conread position:
               
105-497
               

               
Cow position:
               
chr5:71495011-71494606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 28
               

               
Conread position:
               
105-510
               

               
Cow position:
               
chr5:41637057-41636650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
41, 20
               

               
Conread position:
               
106-370
               

               
Cow position:
               
chr5:61492286-61492019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
20, 191
               

               
Conread position:
               
108-295
               

               
Cow position:
               
chr5:11289202-11289394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
108-540
               

               
Cow position:
               
chr5:55068892-55068465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 44
               

               
Conread position:
               
110-415
               

               
Cow position:
               
chr5:56680441-56680125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
18, 12
               

               
Conread position:
               
110-510
               

               
Cow position:
               
chr5:7193597-7193209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
14, 42
               

               
Conread position:
               
115-327
               

               
Cow position:
               
chr5:3589208-3588994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
7, 102
               

               
Conread position:
               
117-511
               

               
Cow position:
               
chr5:34528719-34528337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 5
               

               
Conread position:
               
119-497
               

               
Cow position:
               
chr5:37646375-37646761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 20
               

               
Conread position:
               
121-298
               

               
Cow position:
               
chr5:65679802-65679974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
121-325
               

               
Cow position:
               
chr5:17602034-17602231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
177, 29
               

               
Conread position:
               
121-440
               

               
Cow position:
               
chr5:71723249-71722919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
80, 39
               

               
Conread position:
               
121-462
               

               
Cow position:
               
chr5:1987787-1987441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
158, 63
               

               
Conread position:
               
121-490
               

               
Cow position:
               
chr5:26370857-26370495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
68, 164
               

               
Conread position:
               
121-508
               

               
Cow position:
               
chr5:42777920-42777543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
292, 32
               

               
Conread position:
               
121-510
               

               
Cow position:
               
chr5:4552309-4551909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
121-510
               

               
Cow position:
               
chr5:45170529-45170139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
207, 83
               

               
Conread position:
               
122-510
               

               
Cow position:
               
chr5:26093994-26094392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 211
               

               
Conread position:
               
124-503
               

               
Cow position:
               
chr5:6503711-6504096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 231
               

               
Conread position:
               
125-322
               

               
Cow position:
               
chr5:57230166-57230367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
125-510
               

               
Cow position:
               
chr5:28248342-28247953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
203, 191
               

               
Conread position:
               
126-493
               

               
Cow position:
               
chr5:58320303-58320668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
35, 14
               

               
Conread position:
               
126-508
               

               
Cow position:
               
chr5:71454444-71454817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
36, 13
               

               
Conread position:
               
127-452
               

               
Cow position:
               
chr5:59115544-59115217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
202, 28
               

               
Conread position:
               
128-427
               

               
Cow position:
               
chr5:51935355-51935052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
201, 89
               

               
Conread position:
               
128-499
               

               
Cow position:
               
chr5:8820848-8821224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
116, 14
               

               
Conread position:
               
129-510
               

               
Cow position:
               
chr5:54311501-54311110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 349
               

               
Conread position:
               
131-431
               

               
Cow position:
               
chr5:14473240-14473551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
48, 294
               

               
Conread position:
               
131-476
               

               
Cow position:
               
chr5:7755405-7755742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
26, 43
               

               
Conread position:
               
131-510
               

               
Cow position:
               
chr5:37814790-37814400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
15, 252
               

               
Conread position:
               
131-521
               

               
Cow position:
               
chr5:28230329-28229924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
29, 261
               

               
Conread position:
               
132-360
               

               
Cow position:
               
chr5:41981530-41981301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
162, 103
               

               
Conread position:
               
132-381
               

               
Cow position:
               
chr5:1087044-1087285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
199, 25
               

               
Conread position:
               
132-381
               

               
Cow position:
               
chr5:59872916-59873180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
19, 115
               

               
Conread position:
               
132-390
               

               
Cow position:
               
chr5:55019453-55019196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
246, 25
               

               
Conread position:
               
132-403
               

               
Cow position:
               
chr5:23678541-23678814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
172, 58
               

               
Conread position:
               
132-406
               

               
Cow position:
               
chr5:13717410-13717684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
197, 11
               

               
Conread position:
               
132-423
               

               
Cow position:
               
chr5:44726171-44726456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
20, 187
               

               
Conread position:
               
132-425
               

               
Cow position:
               
chr5:54767747-54768042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
194, 139
               

               
Conread position:
               
132-454
               

               
Cow position:
               
chr5:54060438-54060108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
175, 107
               

               
Conread position:
               
132-471
               

               
Cow position:
               
chr5:61810933-61810608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
195, 97
               

               
Conread position:
               
132-496
               

               
Cow position:
               
chr5:43992490-43992116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 335
               

               
Conread position:
               
132-497
               

               
Cow position:
               
chr5:46509702-46510077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
22, 30
               

               
Conread position:
               
132-508
               

               
Cow position:
               
chr5:21039820-21040195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
10, 31
               

               
Conread position:
               
132-510
               

               
Cow position:
               
chr5:9089866-9090246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 56
               

               
Conread position:
               
132-510
               

               
Cow position:
               
chr5:26476856-26477216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
163, 133
               

               
Conread position:
               
132-513
               

               
Cow position:
               
chr5:28945898-28946285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
30, 7
               

               
Conread position:
               
132-517
               

               
Cow position:
               
chr5:37378017-37377645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
10, 107
               

               
Conread position:
               
132-521
               

               
Cow position:
               
chr5:53855868-53855467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 313
               

               
Conread position:
               
132-540
               

               
Cow position:
               
chr5:16205993-16206398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 122
               

               
Conread position:
               
133-383
               

               
Cow position:
               
chr5:30805325-30805075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
194, 94
               

               
Conread position:
               
133-438
               

               
Cow position:
               
chr5:19524061-19523751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
195, 178
               

               
Conread position:
               
133-440
               

               
Cow position:
               
chr5:36255096-36255406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
164, 229
               

               
Conread position:
               
133-440
               

               
Cow position:
               
chr5:61809525-61809831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
161, 216
               

               
Conread position:
               
133-477
               

               
Cow position:
               
chr5:53842454-53842098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
109, 22
               

               
Conread position:
               
133-481
               

               
Cow position:
               
chr5:8162658-8163018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
110, 22
               

               
Conread position:
               
133-493
               

               
Cow position:
               
chr5:44049859-44049496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 113
               

               
Conread position:
               
133-505
               

               
Cow position:
               
chr5:23140428-23140791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
251, 119
               

               
Conread position:
               
133-510
               

               
Cow position:
               
chr5:33662007-33661631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
251, 168
               

               
Conread position:
               
133-540
               

               
Cow position:
               
chr5:26990547-26990137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
167, 22
               

               
Conread position:
               
134-510
               

               
Cow position:
               
chr5:43929578-43929957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 16
               

               
Conread position:
               
135-317
               

               
Cow position:
               
chr5:58555296-58555112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
135-428
               

               
Cow position:
               
chr5:64591938-64592227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
178, 14
               

               
Conread position:
               
136-326
               

               
Cow position:
               
chr5:38739245-38739430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
159, 0
               

               
Conread position:
               
136-508
               

               
Cow position:
               
chr5:5110911-5111298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 248
               

               
Conread position:
               
137-452
               

               
Cow position:
               
chr5:12866671-12866992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
192, 94
               

               
Conread position:
               
137-521
               

               
Cow position:
               
chr5:63964010-63964408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 31
               

               
Conread position:
               
138-490
               

               
Cow position:
               
chr5:458644-458278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 77
               

               
Conread position:
               
139-510
               

               
Cow position:
               
chr5:65886856-65887237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
6, 13
               

               
Conread position:
               
140-390
               

               
Cow position:
               
chr5:57639821-57640063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
194, 38
               

               
Conread position:
               
140-513
               

               
Cow position:
               
chr5:3204980-3204609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
186, 36
               

               
Conread position:
               
141-402
               

               
Cow position:
               
chr5:35126208-35125945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
150, 172
               

               
Conread position:
               
141-416
               

               
Cow position:
               
chr5:53710536-53710816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
185, 277
               

               
Conread position:
               
141-477
               

               
Cow position:
               
chr5:43457378-43457709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
74, 95
               

               
Conread position:
               
141-505
               

               
Cow position:
               
chr5:63987292-63987665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 91
               

               
Conread position:
               
141-508
               

               
Cow position:
               
chr5:50533235-50533605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 82
               

               
Conread position:
               
141-510
               

               
Cow position:
               
chr5:4031833-4032212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 107
               

               
Conread position:
               
142-346
               

               
Cow position:
               
chr5:35982583-35982793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
19, 152
               

               
Conread position:
               
142-490
               

               
Cow position:
               
chr5:54086690-54086332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 85
               

               
Conread position:
               
143-488
               

               
Cow position:
               
chr5:68264807-68265165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
160, 217
               

               
Conread position:
               
143-521
               

               
Cow position:
               
chr5:359790-360180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
132, 12
               

               
Conread position:
               
143-526
               

               
Cow position:
               
chr5:67212511-67212138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
148, 33
               

               
Conread position:
               
144-510
               

               
Cow position:
               
chr5:6045448-6045063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 248
               

               
Conread position:
               
144-510
               

               
Cow position:
               
chr5:19813069-19813435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
23, 184
               

               
Conread position:
               
146-484
               

               
Cow position:
               
chr5:69731648-69731320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
158, 88
               

               
Conread position:
               
147-349
               

               
Cow position:
               
chr5:63832075-63831870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
180, 0
               

               
Conread position:
               
147-432
               

               
Cow position:
               
chr5:23529135-23529412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
14, 28
               

               
Conread position:
               
147-435
               

               
Cow position:
               
chr5:57101636-57101918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
57, 20
               

               
Conread position:
               
147-475
               

               
Cow position:
               
chr5:50215417-50215747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
108, 32
               

               
Conread position:
               
147-497
               

               
Cow position:
               
chr5:25230870-25231223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
15, 49
               

               
Conread position:
               
147-504
               

               
Cow position:
               
chr5:45574767-45574411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
99, 243
               

               
Conread position:
               
147-508
               

               
Cow position:
               
chr5:7723812-7723451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
128, 144
               

               
Conread position:
               
147-508
               

               
Cow position:
               
chr5:40594883-40595223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
188, 76
               

               
Conread position:
               
147-509
               

               
Cow position:
               
chr5:74858722-74858351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 111
               

               
Conread position:
               
147-510
               

               
Cow position:
               
chr5:34441632-34442015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
16, 251
               

               
Conread position:
               
147-533
               

               
Cow position:
               
chr5:29756484-29756093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
14, 75
               

               
Conread position:
               
147-534
               

               
Cow position:
               
chr5:24175518-24175129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
14, 26
               

               
Conread position:
               
147-540
               

               
Cow position:
               
chr5:56524321-56523918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 189
               

               
Conread position:
               
148-508
               

               
Cow position:
               
chr5:46103815-46104157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
69, 60
               

               
Conread position:
               
148-523
               

               
Cow position:
               
chr5:15479271-15478876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 39
               

               
Conread position:
               
150-405
               

               
Cow position:
               
chr5:7698144-7697893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
177, 141
               

               
Conread position:
               
150-433
               

               
Cow position:
               
chr5:14629661-14629953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
49, 243
               

               
Conread position:
               
150-510
               

               
Cow position:
               
chr5:5257144-5257520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 181
               

               
Conread position:
               
150-510
               

               
Cow position:
               
chr5:72564908-72564539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 163
               

               
Conread position:
               
150-510
               

               
Cow position:
               
chr5:75436745-75437120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 6
               

               
Conread position:
               
151-299
               

               
Cow position:
               
chr5:59627243-59627095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
151-397
               

               
Cow position:
               
chr5:54375359-54375611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
124, 158
               

               
Conread position:
               
151-399
               

               
Cow position:
               
chr5:41294224-41293974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
28, 102
               

               
Conread position:
               
151-440
               

               
Cow position:
               
chr5:30949772-30950062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
145, 235
               

               
Conread position:
               
151-446
               

               
Cow position:
               
chr5:20422051-20422331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
176, 10
               

               
Conread position:
               
151-469
               

               
Cow position:
               
chr5:47323605-47323268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
178, 108
               

               
Conread position:
               
151-470
               

               
Cow position:
               
chr5:37808520-37808848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
151, 276
               

               
Conread position:
               
151-508
               

               
Cow position:
               
chr5:54350218-54350582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 271
               

               
Conread position:
               
151-510
               

               
Cow position:
               
chr5:36855349-36854989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 157
               

               
Conread position:
               
151-510
               

               
Cow position:
               
chr5:44053911-44054261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
11, 55
               

               
Conread position:
               
151-510
               

               
Cow position:
               
chr5:44993906-44994260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 78
               

               
Conread position:
               
151-510
               

               
Cow position:
               
chr5:49685134-49685504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
179, 20
               

               
Conread position:
               
151-513
               

               
Cow position:
               
chr5:15364025-15363664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
129, 154
               

               
Conread position:
               
151-520
               

               
Cow position:
               
chr5:41545750-41546126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
143, 166
               

               
Conread position:
               
151-521
               

               
Cow position:
               
chr5:65601599-65601223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 37
               

               
Conread position:
               
151-522
               

               
Cow position:
               
chr5:3639354-3639720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
178, 51
               

               
Conread position:
               
151-538
               

               
Cow position:
               
chr5:59325698-59326080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 106
               

               
Conread position:
               
151-540
               

               
Cow position:
               
chr5:29771671-29771262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 213
               

               
Conread position:
               
152-342
               

               
Cow position:
               
chr5:15471071-15470882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
142, 89
               

               
Conread position:
               
152-381
               

               
Cow position:
               
chr5:50575925-50575696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
177, 48
               

               
Conread position:
               
152-497
               

               
Cow position:
               
chr5:57737241-57736904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
299, 142
               

               
Conread position:
               
153-355
               

               
Cow position:
               
chr5:26150281-26150484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
174, 14
               

               
Conread position:
               
153-424
               

               
Cow position:
               
chr5:63426864-63427137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
89, 81
               

               
Conread position:
               
153-509
               

               
Cow position:
               
chr5:6683226-6683570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
174, 88
               

               
Conread position:
               
154-425
               

               
Cow position:
               
chr5:45273362-45273633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
175, 22
               

               
Conread position:
               
157-405
               

               
Cow position:
               
chr5:58446944-58446691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
181, 232
               

               
Conread position:
               
157-427
               

               
Cow position:
               
chr5:39875261-39874989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
85, 78
               

               
Conread position:
               
157-433
               

               
Cow position:
               
chr5:47696313-47696579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
157-477
               

               
Cow position:
               
chr5:22643095-22643408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
159, 62
               

               
Conread position:
               
157-493
               

               
Cow position:
               
chr5:20783759-20783418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
64, 91
               

               
Conread position:
               
157-493
               

               
Cow position:
               
chr5:39258642-39258331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
294, 81
               

               
Conread position:
               
157-496
               

               
Cow position:
               
chr5:4710015-4710352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
85, 78
               

               
Conread position:
               
157-498
               

               
Cow position:
               
chr5:18899110-18898772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 47
               

               
Conread position:
               
157-508
               

               
Cow position:
               
chr5:16025331-16025682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
276, 72
               

               
Conread position:
               
157-510
               

               
Cow position:
               
chr5:27419592-27419944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
140, 178
               

               
Conread position:
               
157-510
               

               
Cow position:
               
chr5:34463443-34463808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 37
               

               
Conread position:
               
157-510
               

               
Cow position:
               
chr5:34887058-34887421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
95, 152
               

               
Conread position:
               
157-510
               

               
Cow position:
               
chr5:46322666-46323035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
173, 95
               

               
Conread position:
               
157-510
               

               
Cow position:
               
chr5:48573638-48573984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
25, 65
               

               
Conread position:
               
157-510
               

               
Cow position:
               
chr5:72006728-72007076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
86, 73
               

               
Conread position:
               
157-517
               

               
Cow position:
               
chr5:27102657-27103018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
85, 78
               

               
Conread position:
               
158-497
               

               
Cow position:
               
chr5:6572880-6572541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
194, 55
               

               
Conread position:
               
158-505
               

               
Cow position:
               
chr5:62142812-62142452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 209
               

               
Conread position:
               
158-508
               

               
Cow position:
               
chr5:4218993-4218656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 37
               

               
Conread position:
               
158-510
               

               
Cow position:
               
chr5:67244054-67243701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
53, 88
               

               
Conread position:
               
158-513
               

               
Cow position:
               
chr5:65932807-65933154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
171, 94
               

               
Conread position:
               
158-518
               

               
Cow position:
               
chr5:6528821-6528449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 183
               

               
Conread position:
               
158-521
               

               
Cow position:
               
chr5:58856238-58855871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 65
               

               
Conread position:
               
159-510
               

               
Cow position:
               
chr5:27306439-27306095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
258, 112
               

               
Conread position:
               
159-510
               

               
Cow position:
               
chr5:28927458-28927816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 66
               

               
Conread position:
               
159-510
               

               
Cow position:
               
chr5:52000353-51999996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 48
               

               
Conread position:
               
160-510
               

               
Cow position:
               
chr5:44752173-44752533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
82, 75
               

               
Conread position:
               
163-490
               

               
Cow position:
               
chr5:64758636-64758967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
80, 70
               

               
Conread position:
               
163-500
               

               
Cow position:
               
chr5:45804191-45803847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
14, 30
               

               
Conread position:
               
163-510
               

               
Cow position:
               
chr5:15721943-15722277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
164, 127
               

               
Conread position:
               
163-510
               

               
Cow position:
               
chr5:57626919-57626586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
118, 50
               

               
Conread position:
               
163-513
               

               
Cow position:
               
chr5:63992041-63992390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
79, 69
               

               
Conread position:
               
163-518
               

               
Cow position:
               
chr5:15426669-15426297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
139, 96
               

               
Conread position:
               
163-518
               

               
Cow position:
               
chr5:29903392-29903753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
89, 94
               

               
Conread position:
               
163-537
               

               
Cow position:
               
chr5:34050249-34049858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 150
               

               
Conread position:
               
164-485
               

               
Cow position:
               
chr5:57575904-57575567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
13, 147
               

               
Conread position:
               
164-508
               

               
Cow position:
               
chr5:15598108-15598455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 40
               

               
Conread position:
               
165-464
               

               
Cow position:
               
chr5:6286304-6286604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
263, 138
               

               
Conread position:
               
165-513
               

               
Cow position:
               
chr5:26377538-26377893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 54
               

               
Conread position:
               
167-501
               

               
Cow position:
               
chr5:33538001-33537676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
31, 127
               

               
Conread position:
               
167-513
               

               
Cow position:
               
chr5:42744907-42744571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 33
               

               
Conread position:
               
170-510
               

               
Cow position:
               
chr5:4952875-4952533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
161, 7
               

               
Conread position:
               
170-510
               

               
Cow position:
               
chr5:24349231-24348888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 140
               

               
Conread position:
               
171-442
               

               
Cow position:
               
chr5:32672944-32673211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
158, 27
               

               
Conread position:
               
171-497
               

               
Cow position:
               
chr5:47547603-47547927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
158, 27
               

               
Conread position:
               
171-510
               

               
Cow position:
               
chr5:41129865-41129542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
158, 130
               

               
Conread position:
               
171-510
               

               
Cow position:
               
chr5:69516585-69516930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
156, 91
               

               
Conread position:
               
173-510
               

               
Cow position:
               
chr5:52644959-52645301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
69, 62
               

               
Conread position:
               
173-539
               

               
Cow position:
               
chr5:50637942-50637576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 79
               

               
Conread position:
               
175-486
               

               
Cow position:
               
chr5:20407559-20407866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
127, 153
               

               
Conread position:
               
176-400
               

               
Cow position:
               
chr5:56636013-56635793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
67, 63
               

               
Conread position:
               
176-453
               

               
Cow position:
               
chr5:16214805-16214523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
66, 58
               

               
Conread position:
               
176-488
               

               
Cow position:
               
chr5:9390675-9390334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
32, 219
               

               
Conread position:
               
176-497
               

               
Cow position:
               
chr5:34184340-34184009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
157, 7
               

               
Conread position:
               
176-505
               

               
Cow position:
               
chr5:39442414-39442074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
112, 5
               

               
Conread position:
               
176-508
               

               
Cow position:
               
chr5:32696705-32697034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 32
               

               
Conread position:
               
176-508
               

               
Cow position:
               
chr5:65588817-65588491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
116, 85
               

               
Conread position:
               
176-512
               

               
Cow position:
               
chr5:1343738-1344085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
115, 5
               

               
Conread position:
               
178-429
               

               
Cow position:
               
chr5:67540085-67540339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
117, 209
               

               
Conread position:
               
178-440
               

               
Cow position:
               
chr5:65883656-65883922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
65, 58
               

               
Conread position:
               
178-510
               

               
Cow position:
               
chr5:31481264-31480930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 176
               

               
Conread position:
               
180-508
               

               
Cow position:
               
chr5:61840303-61839967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
15, 108
               

               
Conread position:
               
181-517
               

               
Cow position:
               
chr5:31640538-31640197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 197
               

               
Conread position:
               
181-540
               

               
Cow position:
               
chr5:51503116-51502763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
154, 27
               

               
Conread position:
               
182-449
               

               
Cow position:
               
chr5:46425743-46426011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
118, 153
               

               
Conread position:
               
183-406
               

               
Cow position:
               
chr5:57561634-57561404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
51, 71
               

               
Conread position:
               
185-354
               

               
Cow position:
               
chr5:11965221-11965391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
114, 67
               

               
Conread position:
               
186-497
               

               
Cow position:
               
chr5:31918750-31918444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
143, 45
               

               
Conread position:
               
186-521
               

               
Cow position:
               
chr5:43737855-43738185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
143, 65
               

               
Conread position:
               
189-440
               

               
Cow position:
               
chr5:63865901-63865649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
11, 57
               

               
Conread position:
               
191-517
               

               
Cow position:
               
chr5:4617469-4617144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
64, 51
               

               
Conread position:
               
192-509
               

               
Cow position:
               
chr5:740838-741171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
116, 54
               

               
Conread position:
               
193-407
               

               
Cow position:
               
chr5:76119649-76119436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
102, 15
               

               
Conread position:
               
199-453
               

               
Cow position:
               
chr5:69520986-69520726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
106, 148
               

               
Conread position:
               
199-497
               

               
Cow position:
               
chr5:40039671-40039981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
29, 57
               

               
Conread position:
               
199-510
               

               
Cow position:
               
chr5:16509201-16508873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
50, 232
               

               
Conread position:
               
200-499
               

               
Cow position:
               
chr5:50975996-50975673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
111, 196
               

               
Conread position:
               
200-510
               

               
Cow position:
               
chr5:66815478-66815799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
129, 25
               

               
Conread position:
               
203-496
               

               
Cow position:
               
chr5:29213029-29212739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
126, 26
               

               
Conread position:
               
203-498
               

               
Cow position:
               
chr5:46122262-46122562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
126, 90
               

               
Conread position:
               
204-521
               

               
Cow position:
               
chr5:34638973-34638648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
102, 7
               

               
Conread position:
               
208-539
               

               
Cow position:
               
chr5:41951010-41951335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
226, 70
               

               
Conread position:
               
209-496
               

               
Cow position:
               
chr5:31144702-31144985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
81, 176
               

               
Conread position:
               
209-510
               

               
Cow position:
               
chr5:56820179-56820483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 13
               

               
Conread position:
               
211-510
               

               
Cow position:
               
chr5:47313556-47313250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
117, 53
               

               
Conread position:
               
212-498
               

               
Cow position:
               
chr5:63185172-63185465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
35, 60
               

               
Conread position:
               
213-430
               

               
Cow position:
               
chr5:25447645-25447427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
47, 93
               

               
Conread position:
               
214-510
               

               
Cow position:
               
chr5:28926100-28926408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
78, 102
               

               
Conread position:
               
216-510
               

               
Cow position:
               
chr5:13691489-13691799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
68, 73
               

               
Conread position:
               
216-538
               

               
Cow position:
               
chr5:32140630-32140959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 134
               

               
Conread position:
               
217-440
               

               
Cow position:
               
chr5:21920457-21920225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
82, 22
               

               
Conread position:
               
218-491
               

               
Cow position:
               
chr5:35449312-35449049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
214, 74
               

               
Conread position:
               
225-499
               

               
Cow position:
               
chr5:21964358-21964077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
74, 79
               

               
Conread position:
               
227-496
               

               
Cow position:
               
chr5:40387806-40388075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
79, 8
               

               
Conread position:
               
230-440
               

               
Cow position:
               
chr5:28957550-28957759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
66, 104
               

               
Conread position:
               
235-510
               

               
Cow position:
               
chr5:59443193-59443474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
74, 20
               

               
Conread position:
               
240-471
               

               
Cow position:
               
chr5:6670139-6670382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
66, 111
               

               
Conread position:
               
240-486
               

               
Cow position:
               
chr5:1027640-1027891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
89, 63
               

               
Conread position:
               
240-508
               

               
Cow position:
               
chr5:27155070-27154801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
83, 52
               

               
Conread position:
               
240-508
               

               
Cow position:
               
chr5:64823257-64823534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
63, 117
               

               
Conread position:
               
240-510
               

               
Cow position:
               
chr5:3627098-3627391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
91, 52
               

               
Conread position:
               
241-433
               

               
Cow position:
               
chr5:29979929-29980122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
54, 137
               

               
Conread position:
               
241-513
               

               
Cow position:
               
chr5:12709942-12709660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 146
               

               
Conread position:
               
241-519
               

               
Cow position:
               
chr5:49361939-49362222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
141, 60
               

               
Conread position:
               
242-493
               

               
Cow position:
               
chr5:7140056-7140311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
62, 10
               

               
Conread position:
               
242-537
               

               
Cow position:
               
chr5:27015730-27015441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
220, 11
               

               
Conread position:
               
245-493
               

               
Cow position:
               
chr5:26790406-26790658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
84, 65
               

               
Conread position:
               
245-501
               

               
Cow position:
               
chr5:1779236-1779476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
246-500
               

               
Cow position:
               
chr5:28456361-28456625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
83, 6
               

               
Conread position:
               
246-500
               

               
Cow position:
               
chr5:28459662-28459927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
83, 6
               

               
Conread position:
               
246-510
               

               
Cow position:
               
chr5:27403183-27403467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
64, 6
               

               
Conread position:
               
246-510
               

               
Cow position:
               
chr5:30487290-30487025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
83, 171
               

               
Conread position:
               
246-510
               

               
Cow position:
               
chr5:54127119-54126857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
94, 6
               

               
Conread position:
               
246-521
               

               
Cow position:
               
chr5:10261187-10261474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
39, 7
               

               
Conread position:
               
247-479
               

               
Cow position:
               
chr5:66404181-66403951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
79, 59
               

               
Conread position:
               
254-443
               

               
Cow position:
               
chr5:50972570-50972381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
44, 52
               

               
Conread position:
               
254-463
               

               
Cow position:
               
chr5:42705301-42705088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
27, 22
               

               
Conread position:
               
254-492
               

               
Cow position:
               
chr5:8994525-8994771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
52, 37
               

               
Conread position:
               
254-510
               

               
Cow position:
               
chr5:51490724-51490977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 36
               

               
Conread position:
               
254-510
               

               
Cow position:
               
chr5:54064816-54064556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
81, 47
               

               
Conread position:
               
255-434
               

               
Cow position:
               
chr5:51800933-51801111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
74, 47
               

               
Conread position:
               
255-439
               

               
Cow position:
               
chr5:3668937-3668756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
49, 81
               

               
Conread position:
               
255-439
               

               
Cow position:
               
chr5:71579215-71579028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
255-477
               

               
Cow position:
               
chr5:46499337-46499108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
57, 48
               

               
Conread position:
               
255-493
               

               
Cow position:
               
chr5:32378885-32378663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
39, 51
               

               
Conread position:
               
255-508
               

               
Cow position:
               
chr5:6086521-6086783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
81, 46
               

               
Conread position:
               
255-508
               

               
Cow position:
               
chr5:34916170-34915921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
67, 37
               

               
Conread position:
               
255-508
               

               
Cow position:
               
chr5:71505167-71504904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
44, 134
               

               
Conread position:
               
255-510
               

               
Cow position:
               
chr5:1766310-1766568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
74, 104
               

               
Conread position:
               
255-510
               

               
Cow position:
               
chr5:7921365-7921602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
74, 34
               

               
Conread position:
               
255-515
               

               
Cow position:
               
chr5:60126412-60126147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
45, 60
               

               
Conread position:
               
255-520
               

               
Cow position:
               
chr5:65593911-65593645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
71, 12
               

               
Conread position:
               
255-537
               

               
Cow position:
               
chr5:21944437-21944130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
255-540
               

               
Cow position:
               
chr5:54404850-54405150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
43, 160
               

               
Conread position:
               
256-440
               

               
Cow position:
               
chr5:43816567-43816754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
36, 108
               

               
Conread position:
               
256-473
               

               
Cow position:
               
chr5:17644616-17644842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
256-536
               

               
Cow position:
               
chr5:72310741-72310466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
80, 36
               

               
Conread position:
               
257-536
               

               
Cow position:
               
chr5:41522764-41523045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
131, 79
               

               
Conread position:
               
258-505
               

               
Cow position:
               
chr5:62826716-62826971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
48, 42
               

               
Conread position:
               
259-510
               

               
Cow position:
               
chr5:34885128-34885379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
135, 33
               

               
Conread position:
               
259-540
               

               
Cow position:
               
chr5:44583097-44583374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
70, 40
               

               
Conread position:
               
260-493
               

               
Cow position:
               
chr5:19470156-19470393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
173, 39
               

               
Conread position:
               
261-496
               

               
Cow position:
               
chr5:34288435-34288679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
39, 128
               

               
Conread position:
               
262-510
               

               
Cow position:
               
chr5:32956062-32956313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
42, 126
               

               
Conread position:
               
262-510
               

               
Cow position:
               
chr5:58005278-58005021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
67, 30
               

               
Conread position:
               
262-510
               

               
Cow position:
               
chr5:63840116-63840369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
136, 51
               

               
Conread position:
               
262-520
               

               
Cow position:
               
chr5:51357469-51357736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
58, 39
               

               
Conread position:
               
262-521
               

               
Cow position:
               
chr5:30638831-30639087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
189, 38
               

               
Conread position:
               
262-540
               

               
Cow position:
               
chr5:43474877-43474591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
67, 30
               

               
Conread position:
               
263-510
               

               
Cow position:
               
chr5:64393187-64392931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
70, 29
               

               
Conread position:
               
264-440
               

               
Cow position:
               
chr5:53145854-53146029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
42, 7
               

               
Conread position:
               
268-508
               

               
Cow position:
               
chr5:9859685-9859939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
30, 46
               

               
Conread position:
               
269-510
               

               
Cow position:
               
chr5:694600-694364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
166, 22
               

               
Conread position:
               
271-445
               

               
Cow position:
               
chr5:44849708-44849879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
65, 21
               

               
Conread position:
               
271-452
               

               
Cow position:
               
chr5:41486714-41486901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
271-510
               

               
Cow position:
               
chr5:56134941-56135192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
35, 98
               

               
Conread position:
               
271-510
               

               
Cow position:
               
chr5:65924666-65924922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
271-511
               

               
Cow position:
               
chr5:48757963-48757720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
33, 66
               

               
Conread position:
               
271-518
               

               
Cow position:
               
chr5:49821163-49820911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
116, 30
               

               
Conread position:
               
273-509
               

               
Cow position:
               
chr5:50950576-50950331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
56, 114
               

               
Conread position:
               
274-455
               

               
Cow position:
               
chr5:64060274-64060460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
23, 40
               

               
Conread position:
               
278-510
               

               
Cow position:
               
chr5:40356847-40357093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
280-508
               

               
Cow position:
               
chr5:42748172-42747937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
49, 197
               

               
Conread position:
               
280-510
               

               
Cow position:
               
chr5:10789663-10789901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
42, 5
               

               
Conread position:
               
285-508
               

               
Cow position:
               
chr5:28324364-28324124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
44, 17
               

               
Conread position:
               
285-510
               

               
Cow position:
               
chr5:30808607-30808840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
13, 48
               

               
Conread position:
               
285-510
               

               
Cow position:
               
chr5:34115658-34115439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
44, 16
               

               
Conread position:
               
286-510
               

               
Cow position:
               
chr5:18090733-18090504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
287-513
               

               
Cow position:
               
chr5:42667382-42667614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
97, 50
               

               
Conread position:
               
288-477
               

               
Cow position:
               
chr5:74019764-74019961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
41, 75
               

               
Conread position:
               
288-485
               

               
Cow position:
               
chr5:75230685-75230485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
39, 58
               

               
Conread position:
               
288-486
               

               
Cow position:
               
chr5:2500173-2500388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
288-508
               

               
Cow position:
               
chr5:42677239-42677013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
11, 82
               

               
Conread position:
               
288-510
               

               
Cow position:
               
chr5:27690054-27690282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
47, 17
               

               
Conread position:
               
288-521
               

               
Cow position:
               
chr5:6130360-6130119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
47, 222
               

               
Conread position:
               
289-508
               

               
Cow position:
               
chr5:26562161-26561931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
31, 13
               

               
Conread position:
               
290-510
               

               
Cow position:
               
chr5:72150252-72150027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
39, 97
               

               
Conread position:
               
291-539
               

               
Cow position:
               
chr5:4797314-4797564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
44, 14
               

               
Conread position:
               
292-508
               

               
Cow position:
               
chr5:16185090-16184868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
37, 95
               

               
Conread position:
               
292-513
               

               
Cow position:
               
chr5:45940611-45940833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
43, 67
               

               
Conread position:
               
293-468
               

               
Cow position:
               
chr5:66281408-66281230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
65, 40
               

               
Conread position:
               
293-505
               

               
Cow position:
               
chr5:72286910-72287129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
36, 128
               

               
Conread position:
               
293-510
               

               
Cow position:
               
chr5:59297958-59298182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
35, 20
               

               
Conread position:
               
293-510
               

               
Cow position:
               
chr5:59303277-59303491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
10, 41
               

               
Conread position:
               
293-518
               

               
Cow position:
               
chr5:30816722-30816484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
19, 109
               

               
Conread position:
               
294-453
               

               
Cow position:
               
chr5:19294488-19294641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
33, 92
               

               
Conread position:
               
294-510
               

               
Cow position:
               
chr5:16668562-16668354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
135, 82
               

               
Conread position:
               
295-510
               

               
Cow position:
               
chr5:64844128-64844340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
156, 28
               

               
Conread position:
               
298-505
               

               
Cow position:
               
chr5:6987160-6986940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
24, 89
               

               
Conread position:
               
298-508
               

               
Cow position:
               
chr5:33467045-33467262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
35, 90
               

               
Conread position:
               
300-487
               

               
Cow position:
               
chr5:56518215-56518410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
33, 86
               

               
Conread position:
               
302-437
               

               
Cow position:
               
chr5:43844801-43844939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
20, 52
               

               
Conread position:
               
302-468
               

               
Cow position:
               
chr5:39242205-39242371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
152, 30
               

               
Conread position:
               
302-496
               

               
Cow position:
               
chr5:45037014-45036812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
27, 76
               

               
Conread position:
               
302-508
               

               
Cow position:
               
chr5:41229699-41229491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
56, 31
               

               
Conread position:
               
302-510
               

               
Cow position:
               
chr5:14420350-14420568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
86, 33
               

               
Conread position:
               
302-510
               

               
Cow position:
               
chr5:32963638-32963852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
27, 83
               

               
Conread position:
               
302-521
               

               
Cow position:
               
chr5:56433797-56433564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
27, 85
               

               
Conread position:
               
302-523
               

               
Cow position:
               
chr5:31434254-31434030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
130, 29
               

               
Conread position:
               
305-493
               

               
Cow position:
               
chr5:57271275-57271471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
305-497
               

               
Cow position:
               
chr5:43395152-43395348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
31, 111
               

               
Conread position:
               
305-508
               

               
Cow position:
               
chr5:14415763-14415552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
112, 28
               

               
Conread position:
               
305-510
               

               
Cow position:
               
chr5:3492185-3491978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
28, 109
               

               
Conread position:
               
305-516
               

               
Cow position:
               
chr5:39049438-39049231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
129, 30
               

               
Conread position:
               
305-521
               

               
Cow position:
               
chr5:6575601-6575820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
74, 195
               

               
Conread position:
               
305-537
               

               
Cow position:
               
chr5:35145339-35145099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
21, 82
               

               
Conread position:
               
306-493
               

               
Cow position:
               
chr5:72845791-72845979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
23, 111
               

               
Conread position:
               
306-508
               

               
Cow position:
               
chr5:60520151-60519945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
19, 81
               

               
Conread position:
               
307-442
               

               
Cow position:
               
chr5:31020150-31020286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
121, 76
               

               
Conread position:
               
309-500
               

               
Cow position:
               
chr5:5848203-5848400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
26, 79
               

               
Conread position:
               
311-508
               

               
Cow position:
               
chr5:54530961-54530761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
118, 20
               

               
Conread position:
               
311-523
               

               
Cow position:
               
chr5:23856178-23856401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
313-538
               

               
Cow position:
               
chr5:58229687-58229454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
15, 222
               

               
Conread position:
               
314-521
               

               
Cow position:
               
chr5:63388775-63388561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
15, 58
               

               
Conread position:
               
315-475
               

               
Cow position:
               
chr5:1678375-1678211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
13, 105
               

               
Conread position:
               
315-540
               

               
Cow position:
               
chr5:40058535-40058321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
22, 67
               

               
Conread position:
               
316-510
               

               
Cow position:
               
chr5:50729473-50729272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
71, 17
               

               
Conread position:
               
318-508
               

               
Cow position:
               
chr5:61656582-61656385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
11, 41
               

               
Conread position:
               
325-489
               

               
Cow position:
               
chr5:63917443-63917613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
89, 51
               

               
Conread position:
               
326-460
               

               
Cow position:
               
chr5:45025952-45026091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
106, 16
               

               
Conread position:
               
326-508
               

               
Cow position:
               
chr5:37366867-37366676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
100, 58
               

               
Conread position:
               
330-516
               

               
Cow position:
               
chr5:62261828-62261643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
123, 54
               

               
Conread position:
               
332-500
               

               
Cow position:
               
chr5:15462675-15462501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
53, 146
               

               
Conread position:
               
332-510
               

               
Cow position:
               
chr5:13537111-13536934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
121, 19
               

               
Conread position:
               
334-510
               

               
Cow position:
               
chr5:2332552-2332737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
88, 67
               

               
Conread position:
               
334-537
               

               
Cow position:
               
chr5:61030266-61030480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
24, 51
               

               
Conread position:
               
335-477
               

               
Cow position:
               
chr5:50870503-50870351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
335-496
               

               
Cow position:
               
chr5:12563049-12563216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
97, 15
               

               
Conread position:
               
335-521
               

               
Cow position:
               
chr5:73253049-73252863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
119, 49
               

               
Conread position:
               
336-510
               

               
Cow position:
               
chr5:24642770-24642945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
96, 48
               

               
Conread position:
               
336-510
               

               
Cow position:
               
chr5:66297194-66297015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
66, 48
               

               
Conread position:
               
339-512
               

               
Cow position:
               
chr5:66280838-66281018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
19, 45
               

               
Conread position:
               
342-509
               

               
Cow position:
               
chr5:2851268-2851092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
45, 27
               

               
Conread position:
               
343-510
               

               
Cow position:
               
chr5:22102357-22102536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
343-510
               

               
Cow position:
               
chr5:26541241-26541073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
89, 12
               

               
Conread position:
               
343-521
               

               
Cow position:
               
chr5:12672081-12672261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
92, 41
               

               
Conread position:
               
345-510
               

               
Cow position:
               
chr5:6033187-6033015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
89, 42
               

               
Conread position:
               
345-511
               

               
Cow position:
               
chr5:32087767-32087945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
347-491
               

               
Cow position:
               
chr5:24837001-24837150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
85, 37
               

               
Conread position:
               
359-508
               

               
Cow position:
               
chr5:31635369-31635229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
359-510
               

               
Cow position:
               
chr5:20691537-20691682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
95, 17
               

               
Conread position:
               
359-510
               

               
Cow position:
               
chr5:57156708-57156565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
92, 68
               

               
Conread position:
               
359-540
               

               
Cow position:
               
chr5:41981330-41981145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
70, 89
               

               
Conread position:
               
361-518
               

               
Cow position:
               
chr5:61455690-61455523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
361-539
               

               
Cow position:
               
chr5:53825445-53825271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
28, 23
               

               
Conread position:
               
363-510
               

               
Cow position:
               
chr5:28035639-28035487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
74, 21
               

               
Conread position:
               
369-510
               

               
Cow position:
               
chr5:60948143-60947995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
375-510
               

               
Cow position:
               
chr5:19751762-19751629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
79, 34
               

               
Conread position:
               
379-505
               

               
Cow position:
               
chr5:63967733-63967864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
53, 87
               

               
Conread position:
               
379-513
               

               
Cow position:
               
chr5:41935883-41936025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
384-508
               

               
Cow position:
               
chr5:34923204-34923328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
45, 82
               

               
Conread position:
               
394-515
               

               
Cow position:
               
chr5:60183424-60183299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
38, 118
               
Show alignments to all cow chromosomes.