Cow genome map


           Conread name:
           Ss1.1-rpigcf0_013848.5
        

               Conread position:
               37-456
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 34
               

               Conread position:
               44-234
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               15, 26
               

               Conread position:
               45-597
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 6
               

               Conread position:
               48-528
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               331
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               33, 20
               

               Conread position:
               51-521
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               314
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               144, 17
               

               Conread position:
               51-526
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               318
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               217, 17
               

               Conread position:
               51-526
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 18
               

               Conread position:
               54-528
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 14
               

               Conread position:
               55-527
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               314
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               14, 32
               

               Conread position:
               56-527
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 12
               

               Conread position:
               70-527
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 65
               

               Conread position:
               71-490
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               282
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               10, 56
               

               Conread position:
               71-528
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               317
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               29, 6
               

               Conread position:
               72-431
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               123, 11
               

               Conread position:
               72-526
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 195
               

               Conread position:
               77-524
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               303
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               24, 52
               

               Conread position:
               88-528
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               302
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               16, 44
               

               Conread position:
               93-518
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 31
               

               Conread position:
               93-527
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               299
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               103, 30
               

               Conread position:
               97-526
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               284
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               131, 54
               

               Conread position:
               106-475
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 71
               

               Conread position:
               106-528
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               287
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               94, 17
               

               Conread position:
               110-527
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               280
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               174, 13
               

               Conread position:
               112-528
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 91
               

               Conread position:
               122-525
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               283
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               72, 47
               

               Conread position:
               133-528
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               264
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               20, 103
               

               Conread position:
               138-484
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               58, 103
               

               Conread position:
               138-485
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               58, 100
               

               Conread position:
               154-508
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               45, 25
               

               Conread position:
               154-522
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               257
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               42, 121
               

               Conread position:
               155-527
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               271
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               30, 362
               

               Conread position:
               155-528
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               246
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               40, 14
               

               Conread position:
               156-356
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               42, 73
               

               Conread position:
               156-423
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               39, 83
               

               Conread position:
               156-500
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               39, 11
               

               Conread position:
               156-528
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               254
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               40, 101
               

               Conread position:
               157-528
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               263
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               37, 202
               

               Conread position:
               167-527
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               255
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               27, 116
               

               Conread position:
               178-512
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               234
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               6, 68
               

               Conread position:
               237-507
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               140, 27
               

               Conread position:
               252-487
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               61, 25
               

               Conread position:
               264-489
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               132, 32
               

               Conread position:
               269-524
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               31, 76
               

               Conread position:
               282-489
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               285-527
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               22, 57
               

               Conread position:
               286-488
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               291-527
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               100, 44
               

               Conread position:
               291-527
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               25, 51
               

               Conread position:
               291-527
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               39, 44
               

               Conread position:
               291-528
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               84, 44
               

               Conread position:
               291-555
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               226, 51
               

               Conread position:
               292-447
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               103, 50
               

               Conread position:
               293-528
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               297-545
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               83, 33
               

               Conread position:
               301-528
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               13, 32
               

               Conread position:
               313-528
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               176, 27
               

               Conread position:
               318-485
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               163, 23
               

               Conread position:
               318-522
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               168, 22
               

               Conread position:
               318-526
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               196, 25
               

               Conread position:
               320-526
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               181, 20
               

               Conread position:
               320-528
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               107, 14
               

               Conread position:
               334-498
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               340-510
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               55, 42
               

               Conread position:
               340-521
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               340-527
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               136, 16
               

               Conread position:
               343-528
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               172, 13
               

               Conread position:
               345-528
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               67, 11
               

               Conread position:
               346-528
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               49, 111
               

               Conread position:
               356-542
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               160, 177
               

               Conread position:
               360-525
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               35, 129
               

               Conread position:
               362-528
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               33, 57
               

               Conread position:
               374-527
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               140, 98
               

               Conread position:
               375-527
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               376-561
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               138, 73
               

               Conread position:
               402-528
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               411-528
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               104, 0
               
Show alignments to all cow chromosomes.