• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-rpigcf0_016288.5
        

               
Conread position:
               
1-197
               

               
Cow position:
               
chr16:39646418-39646612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
18, 56
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr16:52789927-52790125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
100, 64
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr16:39514206-39513991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
85, 182
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr16:11957715-11957447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr16:54579039-54579296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
107, 69
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr16:54679538-54679792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
58, 81
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr16:43801050-43800788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
12, 129
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr16:19643758-19644020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
78, 57
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr16:25839488-25839752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 107
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr16:32970209-32969949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
63, 150
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr16:14242241-14242502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
65, 45
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr16:48006618-48006360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
63, 32
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr16:50688393-50688657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr16:820117-820385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
18, 222
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr16:17142805-17143072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
24, 102
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr16:33226669-33226404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 180
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr16:8366951-8366690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
98, 33
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr16:38905360-38905090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
18, 102
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr16:43105644-43105368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
19, 82
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr16:50282556-50282276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
61, 91
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr16:29608388-29608670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
66, 100
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr16:7583266-7583576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
24, 106
               

               
Conread position:
               
1-372
               

               
Cow position:
               
chr16:7549837-7550206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 45
               

               
Conread position:
               
4-199
               

               
Cow position:
               
chr16:33507939-33508141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
120, 61
               

               
Conread position:
               
4-234
               

               
Cow position:
               
chr16:23738051-23738285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
21, 75
               

               
Conread position:
               
4-278
               

               
Cow position:
               
chr16:12060289-12060558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
60, 92
               

               
Conread position:
               
5-145
               

               
Cow position:
               
chr16:39417244-39417105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
61, 95
               

               
Conread position:
               
5-154
               

               
Cow position:
               
chr16:35168602-35168756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
5-161
               

               
Cow position:
               
chr16:13791390-13791548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
5-168
               

               
Cow position:
               
chr16:4144937-4145101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
19, 147
               

               
Conread position:
               
5-183
               

               
Cow position:
               
chr16:16424730-16424559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
59, 95
               

               
Conread position:
               
5-184
               

               
Cow position:
               
chr16:28191943-28192124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
56, 13
               

               
Conread position:
               
5-184
               

               
Cow position:
               
chr16:42777840-42778018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
51, 66
               

               
Conread position:
               
5-185
               

               
Cow position:
               
chr16:42092510-42092332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
168, 101
               

               
Conread position:
               
5-189
               

               
Cow position:
               
chr16:11568244-11568064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
12, 66
               

               
Conread position:
               
5-189
               

               
Cow position:
               
chr16:39237820-39238005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
5-191
               

               
Cow position:
               
chr16:45047756-45047573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
57, 110
               

               
Conread position:
               
5-194
               

               
Cow position:
               
chr16:10651017-10650824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
5-196
               

               
Cow position:
               
chr16:36121107-36120917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
14, 98
               

               
Conread position:
               
5-197
               

               
Cow position:
               
chr16:4981509-4981310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
5-197
               

               
Cow position:
               
chr16:10352744-10352949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
5-197
               

               
Cow position:
               
chr16:53428130-53428324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
11, 93
               

               
Conread position:
               
5-198
               

               
Cow position:
               
chr16:11008218-11008413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
62, 14
               

               
Conread position:
               
5-199
               

               
Cow position:
               
chr16:8279913-8279723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
78, 47
               

               
Conread position:
               
5-199
               

               
Cow position:
               
chr16:9136049-9136237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
20, 114
               

               
Conread position:
               
5-199
               

               
Cow position:
               
chr16:18402558-18402756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
5-199
               

               
Cow position:
               
chr16:53891908-53891717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
61, 106
               

               
Conread position:
               
5-200
               

               
Cow position:
               
chr16:4902462-4902658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
60, 18
               

               
Conread position:
               
5-200
               

               
Cow position:
               
chr16:24672484-24672288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
17, 98
               

               
Conread position:
               
5-200
               

               
Cow position:
               
chr16:49125655-49125463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
59, 107
               

               
Conread position:
               
5-204
               

               
Cow position:
               
chr16:41752699-41752502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
81, 60
               

               
Conread position:
               
5-210
               

               
Cow position:
               
chr16:7152299-7152091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 100
               

               
Conread position:
               
5-211
               

               
Cow position:
               
chr16:8323109-8322901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
5-211
               

               
Cow position:
               
chr16:46627961-46627760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
126, 14
               

               
Conread position:
               
5-212
               

               
Cow position:
               
chr16:11775177-11774966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
21, 95
               

               
Conread position:
               
5-212
               

               
Cow position:
               
chr16:45645812-45645607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
96, 44
               

               
Conread position:
               
5-212
               

               
Cow position:
               
chr16:50521351-50521558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
60, 104
               

               
Conread position:
               
5-230
               

               
Cow position:
               
chr16:571040-570820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
59, 96
               

               
Conread position:
               
5-230
               

               
Cow position:
               
chr16:4699107-4698888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
5-230
               

               
Cow position:
               
chr16:52889535-52889312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
60, 42
               

               
Conread position:
               
5-231
               

               
Cow position:
               
chr16:53048428-53048652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
15, 33
               

               
Conread position:
               
5-236
               

               
Cow position:
               
chr16:8315311-8315088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
168, 54
               

               
Conread position:
               
5-236
               

               
Cow position:
               
chr16:48398378-48398148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
92, 36
               

               
Conread position:
               
5-236
               

               
Cow position:
               
chr16:48493052-48493286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
5-238
               

               
Cow position:
               
chr16:3047468-3047234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
61, 78
               

               
Conread position:
               
5-238
               

               
Cow position:
               
chr16:4275868-4275634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 76
               

               
Conread position:
               
5-239
               

               
Cow position:
               
chr16:50417810-50417587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
64, 35
               

               
Conread position:
               
5-239
               

               
Cow position:
               
chr16:51710255-51710029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
94, 65
               

               
Conread position:
               
5-240
               

               
Cow position:
               
chr16:29712293-29712529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
10, 108
               

               
Conread position:
               
5-240
               

               
Cow position:
               
chr16:53627554-53627318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
54, 103
               

               
Conread position:
               
5-243
               

               
Cow position:
               
chr16:3246333-3246092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
5-243
               

               
Cow position:
               
chr16:42345730-42345500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
5-244
               

               
Cow position:
               
chr16:5836456-5836698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
60, 22
               

               
Conread position:
               
5-244
               

               
Cow position:
               
chr16:14974659-14974430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
42, 14
               

               
Conread position:
               
5-244
               

               
Cow position:
               
chr16:20069701-20069946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
26, 6
               

               
Conread position:
               
5-244
               

               
Cow position:
               
chr16:26373081-26372837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
13, 108
               

               
Conread position:
               
5-244
               

               
Cow position:
               
chr16:27723086-27723338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
59, 227
               

               
Conread position:
               
5-244
               

               
Cow position:
               
chr16:54710160-54709926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
59, 96
               

               
Conread position:
               
5-245
               

               
Cow position:
               
chr16:15824571-15824329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
54, 74
               

               
Conread position:
               
5-245
               

               
Cow position:
               
chr16:39165117-39165354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
14, 49
               

               
Conread position:
               
5-245
               

               
Cow position:
               
chr16:48494680-48494439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
60, 18
               

               
Conread position:
               
5-247
               

               
Cow position:
               
chr16:24855415-24855657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
60, 162
               

               
Conread position:
               
5-248
               

               
Cow position:
               
chr16:8076635-8076385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
20, 205
               

               
Conread position:
               
5-248
               

               
Cow position:
               
chr16:30715369-30715624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
5-250
               

               
Cow position:
               
chr16:14685516-14685270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
60, 93
               

               
Conread position:
               
5-250
               

               
Cow position:
               
chr16:45554316-45554563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
59, 92
               

               
Conread position:
               
5-254
               

               
Cow position:
               
chr16:51869513-51869764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
10, 85
               

               
Conread position:
               
5-257
               

               
Cow position:
               
chr16:5256873-5257123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
90, 53
               

               
Conread position:
               
5-257
               

               
Cow position:
               
chr16:10504706-10504951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
60, 51
               

               
Conread position:
               
5-257
               

               
Cow position:
               
chr16:30037118-30036863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
59, 151
               

               
Conread position:
               
5-257
               

               
Cow position:
               
chr16:31079224-31078966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
44, 250
               

               
Conread position:
               
5-257
               

               
Cow position:
               
chr16:32781239-32781491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
59, 166
               

               
Conread position:
               
5-257
               

               
Cow position:
               
chr16:41530418-41530173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
15, 93
               

               
Conread position:
               
5-257
               

               
Cow position:
               
chr16:42734140-42733884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
60, 8
               

               
Conread position:
               
5-257
               

               
Cow position:
               
chr16:47518711-47518973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
5-257
               

               
Cow position:
               
chr16:48370074-48369823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
60, 28
               

               
Conread position:
               
5-257
               

               
Cow position:
               
chr16:52275257-52275001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
60, 195
               

               
Conread position:
               
5-257
               

               
Cow position:
               
chr16:54664928-54664672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
10, 26
               

               
Conread position:
               
5-258
               

               
Cow position:
               
chr16:12361103-12360844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
5-258
               

               
Cow position:
               
chr16:14754449-14754195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
57, 100
               

               
Conread position:
               
5-258
               

               
Cow position:
               
chr16:31117741-31117487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
60, 92
               

               
Conread position:
               
5-258
               

               
Cow position:
               
chr16:42242243-42241990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
20, 97
               

               
Conread position:
               
5-258
               

               
Cow position:
               
chr16:46433454-46433198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
62, 8
               

               
Conread position:
               
5-258
               

               
Cow position:
               
chr16:49126312-49126059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
59, 17
               

               
Conread position:
               
5-260
               

               
Cow position:
               
chr16:8812209-8811966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
59, 94
               

               
Conread position:
               
5-260
               

               
Cow position:
               
chr16:25386854-25387103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
93, 45
               

               
Conread position:
               
5-260
               

               
Cow position:
               
chr16:41578099-41578357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 111
               

               
Conread position:
               
5-260
               

               
Cow position:
               
chr16:52169938-52170183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
92, 9
               

               
Conread position:
               
5-261
               

               
Cow position:
               
chr16:3614620-3614870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
59, 14
               

               
Conread position:
               
5-261
               

               
Cow position:
               
chr16:45456830-45457093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
13, 22
               

               
Conread position:
               
5-261
               

               
Cow position:
               
chr16:48095888-48095635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
60, 37
               

               
Conread position:
               
5-262
               

               
Cow position:
               
chr16:1549000-1548748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
61, 14
               

               
Conread position:
               
5-262
               

               
Cow position:
               
chr16:8068945-8068692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
62, 15
               

               
Conread position:
               
5-262
               

               
Cow position:
               
chr16:8840766-8841026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
15, 117
               

               
Conread position:
               
5-262
               

               
Cow position:
               
chr16:13689538-13689796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
59, 238
               

               
Conread position:
               
5-262
               

               
Cow position:
               
chr16:14568608-14568358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
64, 21
               

               
Conread position:
               
5-262
               

               
Cow position:
               
chr16:18205834-18206088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
59, 87
               

               
Conread position:
               
5-262
               

               
Cow position:
               
chr16:29159003-29159250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
10, 76
               

               
Conread position:
               
5-262
               

               
Cow position:
               
chr16:32302119-32301870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
17, 39
               

               
Conread position:
               
5-262
               

               
Cow position:
               
chr16:33704680-33704936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 125
               

               
Conread position:
               
5-262
               

               
Cow position:
               
chr16:35188127-35188381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
12, 106
               

               
Conread position:
               
5-262
               

               
Cow position:
               
chr16:44584564-44584308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
44, 35
               

               
Conread position:
               
5-262
               

               
Cow position:
               
chr16:45813830-45813567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
25, 111
               

               
Conread position:
               
5-262
               

               
Cow position:
               
chr16:47964942-47964689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
60, 85
               

               
Conread position:
               
5-262
               

               
Cow position:
               
chr16:48340822-48340563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 13
               

               
Conread position:
               
5-263
               

               
Cow position:
               
chr16:21450717-21450984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
15, 219
               

               
Conread position:
               
5-263
               

               
Cow position:
               
chr16:31978314-31978049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
13, 106
               

               
Conread position:
               
5-264
               

               
Cow position:
               
chr16:39616616-39616856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
35, 18
               

               
Conread position:
               
5-264
               

               
Cow position:
               
chr16:53830712-53830458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
61, 148
               

               
Conread position:
               
5-265
               

               
Cow position:
               
chr16:12320095-12320357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
103, 246
               

               
Conread position:
               
5-265
               

               
Cow position:
               
chr16:29557754-29557490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
60, 84
               

               
Conread position:
               
5-265
               

               
Cow position:
               
chr16:37116944-37117208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
11, 185
               

               
Conread position:
               
5-265
               

               
Cow position:
               
chr16:38708957-38708702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
59, 87
               

               
Conread position:
               
5-265
               

               
Cow position:
               
chr16:42078967-42078716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
60, 96
               

               
Conread position:
               
5-265
               

               
Cow position:
               
chr16:51598732-51598480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
60, 87
               

               
Conread position:
               
5-266
               

               
Cow position:
               
chr16:51246821-51247070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
21, 101
               

               
Conread position:
               
5-267
               

               
Cow position:
               
chr16:4857222-4856965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
94, 60
               

               
Conread position:
               
5-267
               

               
Cow position:
               
chr16:5896292-5896554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
59, 148
               

               
Conread position:
               
5-267
               

               
Cow position:
               
chr16:7442229-7441966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
17, 168
               

               
Conread position:
               
5-267
               

               
Cow position:
               
chr16:8239992-8239729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
86, 108
               

               
Conread position:
               
5-267
               

               
Cow position:
               
chr16:8737938-8738201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
59, 239
               

               
Conread position:
               
5-267
               

               
Cow position:
               
chr16:11615359-11615109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
5-267
               

               
Cow position:
               
chr16:12633759-12634019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
12, 99
               

               
Conread position:
               
5-267
               

               
Cow position:
               
chr16:13195468-13195199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
59, 190
               

               
Conread position:
               
5-267
               

               
Cow position:
               
chr16:25170262-25170527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
38, 97
               

               
Conread position:
               
5-267
               

               
Cow position:
               
chr16:33267589-33267855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
18, 99
               

               
Conread position:
               
5-267
               

               
Cow position:
               
chr16:33645888-33646149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 239
               

               
Conread position:
               
5-267
               

               
Cow position:
               
chr16:38663835-38663574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
20, 101
               

               
Conread position:
               
5-267
               

               
Cow position:
               
chr16:47820447-47820707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
94, 13
               

               
Conread position:
               
5-267
               

               
Cow position:
               
chr16:49169512-49169244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
36, 220
               

               
Conread position:
               
5-267
               

               
Cow position:
               
chr16:49229898-49229636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
60, 16
               

               
Conread position:
               
5-267
               

               
Cow position:
               
chr16:50289023-50289285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
62, 219
               

               
Conread position:
               
5-267
               

               
Cow position:
               
chr16:50906344-50906612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
11, 94
               

               
Conread position:
               
5-267
               

               
Cow position:
               
chr16:51500807-51501062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
60, 74
               

               
Conread position:
               
5-268
               

               
Cow position:
               
chr16:10773006-10773256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
59, 98
               

               
Conread position:
               
5-268
               

               
Cow position:
               
chr16:35758085-35758333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
5-268
               

               
Cow position:
               
chr16:45139545-45139799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 102
               

               
Conread position:
               
5-268
               

               
Cow position:
               
chr16:48191128-48190875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
70, 86
               

               
Conread position:
               
5-269
               

               
Cow position:
               
chr16:7665508-7665774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
21, 246
               

               
Conread position:
               
5-269
               

               
Cow position:
               
chr16:8066012-8065751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
20, 85
               

               
Conread position:
               
5-269
               

               
Cow position:
               
chr16:8448771-8448518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
5-269
               

               
Cow position:
               
chr16:15762286-15762019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
11, 92
               

               
Conread position:
               
5-269
               

               
Cow position:
               
chr16:23955953-23955693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
14, 33
               

               
Conread position:
               
5-269
               

               
Cow position:
               
chr16:45609864-45610122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
11, 6
               

               
Conread position:
               
5-269
               

               
Cow position:
               
chr16:55683169-55683434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
11, 97
               

               
Conread position:
               
5-270
               

               
Cow position:
               
chr16:9985513-9985257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
82, 37
               

               
Conread position:
               
5-271
               

               
Cow position:
               
chr16:9933032-9933292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
10, 35
               

               
Conread position:
               
5-271
               

               
Cow position:
               
chr16:40446125-40446402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
17, 177
               

               
Conread position:
               
5-272
               

               
Cow position:
               
chr16:24825945-24826215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
61, 109
               

               
Conread position:
               
5-272
               

               
Cow position:
               
chr16:53086456-53086202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
113, 37
               

               
Conread position:
               
5-273
               

               
Cow position:
               
chr16:14106519-14106778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
64, 80
               

               
Conread position:
               
5-274
               

               
Cow position:
               
chr16:31348894-31348622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
59, 178
               

               
Conread position:
               
5-274
               

               
Cow position:
               
chr16:56565469-56565738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
10, 99
               

               
Conread position:
               
5-275
               

               
Cow position:
               
chr16:47643288-47643567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
5-277
               

               
Cow position:
               
chr16:4059228-4059500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
62, 203
               

               
Conread position:
               
5-277
               

               
Cow position:
               
chr16:10592308-10592577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
59, 104
               

               
Conread position:
               
5-277
               

               
Cow position:
               
chr16:33198561-33198296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
91, 64
               

               
Conread position:
               
5-280
               

               
Cow position:
               
chr16:22842186-22841910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
11, 181
               

               
Conread position:
               
5-280
               

               
Cow position:
               
chr16:54341861-54342134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
60, 82
               

               
Conread position:
               
5-281
               

               
Cow position:
               
chr16:3633986-3634267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
5-281
               

               
Cow position:
               
chr16:17945395-17945672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
52, 18
               

               
Conread position:
               
5-283
               

               
Cow position:
               
chr16:39394450-39394721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
249, 54
               

               
Conread position:
               
5-284
               

               
Cow position:
               
chr16:37669863-37669584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
60, 96
               

               
Conread position:
               
5-285
               

               
Cow position:
               
chr16:17626803-17627084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
13, 97
               

               
Conread position:
               
5-287
               

               
Cow position:
               
chr16:14758605-14758890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
10, 173
               

               
Conread position:
               
5-287
               

               
Cow position:
               
chr16:20025320-20025597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
5-287
               

               
Cow position:
               
chr16:28833712-28833998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
61, 30
               

               
Conread position:
               
5-288
               

               
Cow position:
               
chr16:22804718-22804440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
94, 19
               

               
Conread position:
               
5-289
               

               
Cow position:
               
chr16:40562104-40562384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 230
               

               
Conread position:
               
5-290
               

               
Cow position:
               
chr16:19408643-19408367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
61, 95
               

               
Conread position:
               
5-291
               

               
Cow position:
               
chr16:13989855-13990136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
48, 98
               

               
Conread position:
               
5-313
               

               
Cow position:
               
chr16:24702725-24703032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
11, 148
               

               
Conread position:
               
5-316
               

               
Cow position:
               
chr16:5741117-5741433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
62, 96
               

               
Conread position:
               
5-330
               

               
Cow position:
               
chr16:35296946-35297282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
20, 51
               

               
Conread position:
               
5-361
               

               
Cow position:
               
chr16:42217813-42217473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
11, 99
               

               
Conread position:
               
5-370
               

               
Cow position:
               
chr16:39172282-39171926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
87, 65
               

               
Conread position:
               
5-372
               

               
Cow position:
               
chr16:7498934-7499295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
59, 99
               

               
Conread position:
               
5-372
               

               
Cow position:
               
chr16:19003643-19003318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
6-180
               

               
Cow position:
               
chr16:21905040-21905212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
59, 42
               

               
Conread position:
               
6-239
               

               
Cow position:
               
chr16:56231701-56231936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
65, 74
               

               
Conread position:
               
6-244
               

               
Cow position:
               
chr16:22808678-22808444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
58, 101
               

               
Conread position:
               
6-252
               

               
Cow position:
               
chr16:17288815-17289070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
6-255
               

               
Cow position:
               
chr16:51696954-51697208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
9, 43
               

               
Conread position:
               
6-261
               

               
Cow position:
               
chr16:11806550-11806803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
97, 61
               

               
Conread position:
               
6-262
               

               
Cow position:
               
chr16:7504962-7505214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
65, 187
               

               
Conread position:
               
6-262
               

               
Cow position:
               
chr16:11082883-11083129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
6-263
               

               
Cow position:
               
chr16:26649755-26649498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
61, 232
               

               
Conread position:
               
6-265
               

               
Cow position:
               
chr16:238140-238402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
56, 172
               

               
Conread position:
               
6-267
               

               
Cow position:
               
chr16:13306989-13306737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
79, 57
               

               
Conread position:
               
6-269
               

               
Cow position:
               
chr16:42444030-42444294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
53, 99
               

               
Conread position:
               
6-272
               

               
Cow position:
               
chr16:5636463-5636726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
28, 58
               

               
Conread position:
               
6-277
               

               
Cow position:
               
chr16:3303906-3304170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
65, 28
               

               
Conread position:
               
6-280
               

               
Cow position:
               
chr16:13698386-13698662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
17, 200
               

               
Conread position:
               
6-281
               

               
Cow position:
               
chr16:13611579-13611304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
53, 110
               

               
Conread position:
               
6-311
               

               
Cow position:
               
chr16:31122371-31122072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
89, 37
               

               
Conread position:
               
6-365
               

               
Cow position:
               
chr16:11105427-11105802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
6-372
               

               
Cow position:
               
chr16:54083909-54084280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
11, 229
               

               
Conread position:
               
7-199
               

               
Cow position:
               
chr16:48146782-48146591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
169, 99
               

               
Conread position:
               
7-238
               

               
Cow position:
               
chr16:39402123-39401908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
7-244
               

               
Cow position:
               
chr16:36203742-36203506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
146, 40
               

               
Conread position:
               
7-263
               

               
Cow position:
               
chr16:25380621-25380364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
8, 97
               

               
Conread position:
               
7-265
               

               
Cow position:
               
chr16:45677862-45678112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
86, 20
               

               
Conread position:
               
7-268
               

               
Cow position:
               
chr16:47854818-47855076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
8, 90
               

               
Conread position:
               
7-281
               

               
Cow position:
               
chr16:9973623-9973348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
60, 108
               

               
Conread position:
               
8-199
               

               
Cow position:
               
chr16:13752248-13752063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
59, 89
               

               
Conread position:
               
8-235
               

               
Cow position:
               
chr16:52835007-52834783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
90, 50
               

               
Conread position:
               
8-258
               

               
Cow position:
               
chr16:20634002-20633745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
56, 123
               

               
Conread position:
               
8-267
               

               
Cow position:
               
chr16:19047562-19047299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
12, 218
               

               
Conread position:
               
8-273
               

               
Cow position:
               
chr16:17282541-17282798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
8-285
               

               
Cow position:
               
chr16:11790893-11791168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
57, 71
               

               
Conread position:
               
8-368
               

               
Cow position:
               
chr16:11102948-11102598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
14, 216
               

               
Conread position:
               
9-158
               

               
Cow position:
               
chr16:24148035-24148189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
9-198
               

               
Cow position:
               
chr16:13233071-13232881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
55, 94
               

               
Conread position:
               
9-199
               

               
Cow position:
               
chr16:35937215-35937406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
55, 153
               

               
Conread position:
               
9-201
               

               
Cow position:
               
chr16:45753573-45753386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
81, 25
               

               
Conread position:
               
9-207
               

               
Cow position:
               
chr16:50873287-50873093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
55, 92
               

               
Conread position:
               
9-237
               

               
Cow position:
               
chr16:27659866-27659639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
136, 26
               

               
Conread position:
               
9-249
               

               
Cow position:
               
chr16:4626514-4626272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
59, 81
               

               
Conread position:
               
9-262
               

               
Cow position:
               
chr16:39683231-39682966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
45, 203
               

               
Conread position:
               
9-269
               

               
Cow position:
               
chr16:42633873-42633607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
58, 139
               

               
Conread position:
               
9-273
               

               
Cow position:
               
chr16:7075791-7076054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
48, 163
               

               
Conread position:
               
9-275
               

               
Cow position:
               
chr16:5363773-5364046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
9-276
               

               
Cow position:
               
chr16:9904970-9905233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
56, 11
               

               
Conread position:
               
9-280
               

               
Cow position:
               
chr16:16548487-16548757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
58, 195
               

               
Conread position:
               
9-287
               

               
Cow position:
               
chr16:53089463-53089199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
50, 83
               

               
Conread position:
               
9-302
               

               
Cow position:
               
chr16:23681247-23681535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
85, 26
               

               
Conread position:
               
10-243
               

               
Cow position:
               
chr16:21762093-21761857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
55, 110
               

               
Conread position:
               
10-250
               

               
Cow position:
               
chr16:42240927-42241168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
31, 87
               

               
Conread position:
               
11-243
               

               
Cow position:
               
chr16:55233574-55233794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
11-244
               

               
Cow position:
               
chr16:42340075-42340310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
14, 42
               

               
Conread position:
               
11-269
               

               
Cow position:
               
chr16:56082483-56082228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
55, 95
               

               
Conread position:
               
12-262
               

               
Cow position:
               
chr16:23730046-23729785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
13-269
               

               
Cow position:
               
chr16:2223520-2223260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
52, 240
               

               
Conread position:
               
13-269
               

               
Cow position:
               
chr16:34754079-34753821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
13-269
               

               
Cow position:
               
chr16:43308680-43308426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
56, 96
               

               
Conread position:
               
13-276
               

               
Cow position:
               
chr16:34153686-34153427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
52, 145
               

               
Conread position:
               
14-151
               

               
Cow position:
               
chr16:8796067-8795928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
14-192
               

               
Cow position:
               
chr16:1725195-1725012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
53, 173
               

               
Conread position:
               
14-200
               

               
Cow position:
               
chr16:10148163-10148352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
14-245
               

               
Cow position:
               
chr16:22206958-22207192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
88, 44
               

               
Conread position:
               
14-257
               

               
Cow position:
               
chr16:15370565-15370817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
51, 98
               

               
Conread position:
               
14-258
               

               
Cow position:
               
chr16:53509100-53508858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
53, 95
               

               
Conread position:
               
14-261
               

               
Cow position:
               
chr16:26676804-26676555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
51, 112
               

               
Conread position:
               
14-261
               

               
Cow position:
               
chr16:37452733-37452485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
51, 97
               

               
Conread position:
               
14-262
               

               
Cow position:
               
chr16:22984640-22984883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
50, 88
               

               
Conread position:
               
14-262
               

               
Cow position:
               
chr16:56796783-56796534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
50, 93
               

               
Conread position:
               
14-265
               

               
Cow position:
               
chr16:18757957-18757702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
41, 32
               

               
Conread position:
               
14-271
               

               
Cow position:
               
chr16:8193339-8193593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
93, 25
               

               
Conread position:
               
14-271
               

               
Cow position:
               
chr16:13969491-13969226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
21, 95
               

               
Conread position:
               
14-275
               

               
Cow position:
               
chr16:17745716-17745979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
53, 191
               

               
Conread position:
               
14-277
               

               
Cow position:
               
chr16:8933541-8933279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
51, 90
               

               
Conread position:
               
14-277
               

               
Cow position:
               
chr16:52133630-52133367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
53, 89
               

               
Conread position:
               
14-277
               

               
Cow position:
               
chr16:54734128-54734383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
50, 78
               

               
Conread position:
               
14-278
               

               
Cow position:
               
chr16:41697203-41696944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
53, 89
               

               
Conread position:
               
14-284
               

               
Cow position:
               
chr16:18354066-18353805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
15-265
               

               
Cow position:
               
chr16:17903766-17903512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
52, 238
               

               
Conread position:
               
15-268
               

               
Cow position:
               
chr16:18052214-18052468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
50, 140
               

               
Conread position:
               
15-269
               

               
Cow position:
               
chr16:54226715-54226460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
52, 157
               

               
Conread position:
               
18-254
               

               
Cow position:
               
chr16:11939928-11940161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
46, 70
               

               
Conread position:
               
18-257
               

               
Cow position:
               
chr16:40333440-40333201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
49, 135
               

               
Conread position:
               
23-261
               

               
Cow position:
               
chr16:19052527-19052766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
19, 65
               

               
Conread position:
               
23-271
               

               
Cow position:
               
chr16:45121930-45122176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
38, 56
               

               
Conread position:
               
24-197
               

               
Cow position:
               
chr16:37380161-37380337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
41, 87
               

               
Conread position:
               
24-211
               

               
Cow position:
               
chr16:47852700-47852512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
40, 69
               

               
Conread position:
               
24-239
               

               
Cow position:
               
chr16:16570807-16571022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
42, 83
               

               
Conread position:
               
24-257
               

               
Cow position:
               
chr16:21317703-21317466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
24-259
               

               
Cow position:
               
chr16:424920-424685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
43, 15
               

               
Conread position:
               
24-265
               

               
Cow position:
               
chr16:4910634-4910390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
41, 198
               

               
Conread position:
               
24-267
               

               
Cow position:
               
chr16:16597452-16597693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
5, 76
               

               
Conread position:
               
24-267
               

               
Cow position:
               
chr16:44744241-44743998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
41, 198
               

               
Conread position:
               
24-269
               

               
Cow position:
               
chr16:10032532-10032775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
41, 85
               

               
Conread position:
               
24-278
               

               
Cow position:
               
chr16:10945538-10945294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
40, 67
               

               
Conread position:
               
24-286
               

               
Cow position:
               
chr16:43674767-43675030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
41, 79
               

               
Conread position:
               
24-290
               

               
Cow position:
               
chr16:13578969-13578699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
41, 197
               

               
Conread position:
               
24-311
               

               
Cow position:
               
chr16:26323622-26323340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
184, 61
               

               
Conread position:
               
25-200
               

               
Cow position:
               
chr16:29677737-29677564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
40, 52
               

               
Conread position:
               
25-255
               

               
Cow position:
               
chr16:40514587-40514359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
40, 84
               

               
Conread position:
               
25-289
               

               
Cow position:
               
chr16:12273962-12274226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
40, 160
               

               
Conread position:
               
26-236
               

               
Cow position:
               
chr16:27160971-27160758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
26-236
               

               
Cow position:
               
chr16:50667180-50667397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
39, 186
               

               
Conread position:
               
26-264
               

               
Cow position:
               
chr16:2417695-2417457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
39, 175
               

               
Conread position:
               
26-289
               

               
Cow position:
               
chr16:18141434-18141165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
41, 141
               

               
Conread position:
               
27-251
               

               
Cow position:
               
chr16:6344547-6344320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
38, 147
               

               
Conread position:
               
28-244
               

               
Cow position:
               
chr16:20871923-20872136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
173, 61
               

               
Conread position:
               
29-238
               

               
Cow position:
               
chr16:14125041-14125244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
36, 53
               

               
Conread position:
               
29-239
               

               
Cow position:
               
chr16:42176541-42176754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
25, 201
               

               
Conread position:
               
30-250
               

               
Cow position:
               
chr16:16933014-16933239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
10, 77
               

               
Conread position:
               
30-265
               

               
Cow position:
               
chr16:39474247-39474022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
34, 52
               

               
Conread position:
               
30-273
               

               
Cow position:
               
chr16:21039926-21040171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
68, 40
               

               
Conread position:
               
36-264
               

               
Cow position:
               
chr16:32807388-32807161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
28, 124
               

               
Conread position:
               
36-325
               

               
Cow position:
               
chr16:33054579-33054285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
29, 262
               

               
Conread position:
               
41-277
               

               
Cow position:
               
chr16:44239314-44239560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
16, 218
               

               
Conread position:
               
41-287
               

               
Cow position:
               
chr16:9500426-9500677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
24, 167
               

               
Conread position:
               
42-250
               

               
Cow position:
               
chr16:45731478-45731271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
23, 174
               

               
Conread position:
               
42-251
               

               
Cow position:
               
chr16:34220094-34220307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
44-261
               

               
Cow position:
               
chr16:27701340-27701129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
20, 36
               

               
Conread position:
               
45-255
               

               
Cow position:
               
chr16:30359147-30358938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
20, 52
               

               
Conread position:
               
45-287
               

               
Cow position:
               
chr16:3114451-3114696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
22, 66
               

               
Conread position:
               
46-265
               

               
Cow position:
               
chr16:17135145-17134927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
52, 32
               

               
Conread position:
               
46-273
               

               
Cow position:
               
chr16:29527739-29527969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
10, 187
               

               
Conread position:
               
46-289
               

               
Cow position:
               
chr16:33134856-33135097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
20, 77
               

               
Conread position:
               
47-265
               

               
Cow position:
               
chr16:48956720-48956932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
92, 18
               

               
Conread position:
               
48-194
               

               
Cow position:
               
chr16:22124050-22123906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
17, 48
               

               
Conread position:
               
48-244
               

               
Cow position:
               
chr16:22919389-22919581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
46, 17
               

               
Conread position:
               
49-277
               

               
Cow position:
               
chr16:53792901-53792674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
18, 52
               

               
Conread position:
               
50-230
               

               
Cow position:
               
chr16:50370516-50370694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
52-278
               

               
Cow position:
               
chr16:17135650-17135872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
35, 52
               

               
Conread position:
               
52-287
               

               
Cow position:
               
chr16:40700808-40700580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
15, 57
               

               
Conread position:
               
53-262
               

               
Cow position:
               
chr16:30305893-30305682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
14, 120
               

               
Conread position:
               
53-302
               

               
Cow position:
               
chr16:27728172-27728430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
40, 8
               

               
Conread position:
               
59-265
               

               
Cow position:
               
chr16:8530957-8530750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
8, 170
               

               
Conread position:
               
60-254
               

               
Cow position:
               
chr16:42977393-42977590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
42, 176
               

               
Conread position:
               
61-362
               

               
Cow position:
               
chr16:496444-496148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
63-254
               

               
Cow position:
               
chr16:9552994-9553181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
63-258
               

               
Cow position:
               
chr16:11135049-11134852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
63-260
               

               
Cow position:
               
chr16:20824417-20824606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
63-262
               

               
Cow position:
               
chr16:31561685-31561887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
40, 182
               

               
Conread position:
               
63-298
               

               
Cow position:
               
chr16:7980725-7980956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
48, 88
               

               
Conread position:
               
65-310
               

               
Cow position:
               
chr16:46430217-46429975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
21, 107
               

               
Conread position:
               
70-262
               

               
Cow position:
               
chr16:45785675-45785869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
70-265
               

               
Cow position:
               
chr16:45294483-45294682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
31, 44
               

               
Conread position:
               
70-267
               

               
Cow position:
               
chr16:11584457-11584268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
85, 28
               

               
Conread position:
               
71-284
               

               
Cow position:
               
chr16:31880821-31880615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
72-259
               

               
Cow position:
               
chr16:7136406-7136216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
82-276
               

               
Cow position:
               
chr16:15953869-15953677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
69, 153
               

               
Conread position:
               
83-289
               

               
Cow position:
               
chr16:12010047-12010253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
27, 195
               

               
Conread position:
               
88-248
               

               
Cow position:
               
chr16:12133818-12133979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
91-262
               

               
Cow position:
               
chr16:33235200-33235032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
91-372
               

               
Cow position:
               
chr16:17292061-17291788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
148, 183
               

               
Conread position:
               
94-274
               

               
Cow position:
               
chr16:17460131-17460305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
54, 135
               

               
Conread position:
               
94-304
               

               
Cow position:
               
chr16:33530372-33530583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
14, 126
               

               
Conread position:
               
101-262
               

               
Cow position:
               
chr16:48613504-48613345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
104-262
               

               
Cow position:
               
chr16:1582952-1582793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
104-267
               

               
Cow position:
               
chr16:21370213-21370053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
105-368
               

               
Cow position:
               
chr16:9966708-9966449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
125, 112
               

               
Conread position:
               
106-267
               

               
Cow position:
               
chr16:15945280-15945118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
106-269
               

               
Cow position:
               
chr16:24591828-24591992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
107-244
               

               
Cow position:
               
chr16:32893605-32893742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
107-262
               

               
Cow position:
               
chr16:7723678-7723833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
107-277
               

               
Cow position:
               
chr16:11390309-11390138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
108-262
               

               
Cow position:
               
chr16:31149356-31149508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
108-275
               

               
Cow position:
               
chr16:29026186-29026350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
109-199
               

               
Cow position:
               
chr16:19815268-19815178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
91
               

               
Alignm identity:
               
80
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
118-275
               

               
Cow position:
               
chr16:24142971-24142816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
5, 57
               

               
Conread position:
               
118-301
               

               
Cow position:
               
chr16:20265574-20265392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
9, 16
               

               
Conread position:
               
124-262
               

               
Cow position:
               
chr16:34205070-34204932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
124-368
               

               
Cow position:
               
chr16:16945305-16945065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
10, 25
               

               
Conread position:
               
133-265
               

               
Cow position:
               
chr16:19478762-19478631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
115, 0
               
Show alignments to all cow chromosomes.