Cow genome map

Conread name: Ss1.1-rpigcf0_016288.5

Conread position: 1-197
Cow position: chr18:20462857-20462662 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 64, 36

Conread position: 1-199
Cow position: chr18:3370735-3370935 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 62, 172

Conread position: 1-199
Cow position: chr18:20127266-20127070 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 59, 18

Conread position: 1-236
Cow position: chr18:38344642-38344878 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 162
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 65, 151

Conread position: 1-236
Cow position: chr18:47183446-47183221 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 166
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 64, 91

Conread position: 1-249
Cow position: chr18:19619789-19620026 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 175
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 51, 90

Conread position: 1-262
Cow position: chr18:3211708-3211979 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 188
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 14, 216

Conread position: 1-271
Cow position: chr18:33896591-33896311 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 208
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 66, 36

Conread position: 1-271
Cow position: chr18:56165825-56166092 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 189
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 54, 18

Conread position: 1-280
Cow position: chr18:36458768-36459049 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 201
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 14, 104

Conread position: 1-284
Cow position: chr18:19896619-19896331 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 200
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 25, 181

Conread position: 1-287
Cow position: chr18:36230883-36230606 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 211
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 64, 26

Conread position: 1-287
Cow position: chr18:39434664-39434948 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 196
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 63, 23

Conread position: 1-318
Cow position: chr18:21102937-21102627 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 213
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 21, 107

Conread position: 2-268
Cow position: chr18:11691570-11691305 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 78

Conread position: 3-263
Cow position: chr18:52854887-52855153 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 187
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 6, 205

Conread position: 4-162
Cow position: chr18:11618318-11618465 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 4-168
Cow position: chr18:44549075-44548908 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 132
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 65, 0

Conread position: 4-189
Cow position: chr18:8105106-8104914 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 147
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 60, 0

Conread position: 4-197
Cow position: chr18:9557823-9558011 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 64, 0

Conread position: 4-238
Cow position: chr18:7952041-7952277 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 89, 61

Conread position: 4-240
Cow position: chr18:10954318-10954542 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 167
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 60, 97

Conread position: 4-257
Cow position: chr18:8171247-8170991 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 185
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 5, 104

Conread position: 4-262
Cow position: chr18:10891355-10891611 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 189
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 59, 45

Conread position: 4-287
Cow position: chr18:22214321-22214611 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 199
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 21, 50

Conread position: 5-95
Cow position: chr18:13293351-13293444 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 81
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 5-145
Cow position: chr18:15340606-15340463 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 59, 103

Conread position: 5-179
Cow position: chr18:29991678-29991495 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 143
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 14, 0

Conread position: 5-187
Cow position: chr18:11831969-11832143 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 65, 0

Conread position: 5-187
Cow position: chr18:33407456-33407640 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 144
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 62, 102

Conread position: 5-191
Cow position: chr18:4952368-4952183 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 14

Conread position: 5-196
Cow position: chr18:7108967-7109162 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 5-197
Cow position: chr18:51406070-51405873 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 104

Conread position: 5-197
Cow position: chr18:55806793-55806600 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 137
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 20, 98

Conread position: 5-198
Cow position: chr18:5578147-5578341 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 54, 143

Conread position: 5-199
Cow position: chr18:5487091-5487277 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 60, 30

Conread position: 5-199
Cow position: chr18:6610019-6609822 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 10, 99

Conread position: 5-199
Cow position: chr18:25206349-25206153 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 65, 129

Conread position: 5-199
Cow position: chr18:25984729-25984536 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 137
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 98

Conread position: 5-199
Cow position: chr18:29958316-29958129 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 152
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 48, 0

Conread position: 5-199
Cow position: chr18:30248290-30248104 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 151
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 136, 59

Conread position: 5-199
Cow position: chr18:32883147-32883339 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 59, 93

Conread position: 5-200
Cow position: chr18:55461867-55461670 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 60, 0

Conread position: 5-201
Cow position: chr18:3027521-3027323 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 54, 172

Conread position: 5-206
Cow position: chr18:4182347-4182145 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 67, 20

Conread position: 5-209
Cow position: chr18:13507898-13507695 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 60, 167

Conread position: 5-221
Cow position: chr18:3166650-3166432 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 80, 15

Conread position: 5-228
Cow position: chr18:9066539-9066766 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 160
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 20, 42

Conread position: 5-230
Cow position: chr18:51212027-51212249 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 87, 53

Conread position: 5-231
Cow position: chr18:4381132-4381360 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 152
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 62, 201

Conread position: 5-235
Cow position: chr18:3132913-3132699 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 164
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 95, 0

Conread position: 5-235
Cow position: chr18:29796584-29796357 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 155
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 59, 94

Conread position: 5-236
Cow position: chr18:11684829-11685054 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 174
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 52, 0

Conread position: 5-239
Cow position: chr18:11577929-11578149 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 176
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 158, 67

Conread position: 5-239
Cow position: chr18:20126146-20126380 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 173
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 60, 74

Conread position: 5-239
Cow position: chr18:49100529-49100293 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 168
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 60, 0

Conread position: 5-241
Cow position: chr18:45570855-45571089 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 174, 0

Conread position: 5-243
Cow position: chr18:3209555-3209801 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 173
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 60, 25

Conread position: 5-243
Cow position: chr18:4540038-4539803 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 172
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 64, 91

Conread position: 5-243
Cow position: chr18:19849915-19849681 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 166
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 59, 111

Conread position: 5-244
Cow position: chr18:31586526-31586294 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 167
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 12, 98

Conread position: 5-244
Cow position: chr18:51850719-51850484 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 169
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 17, 99

Conread position: 5-245
Cow position: chr18:38686935-38687161 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 172
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 62, 30

Conread position: 5-245
Cow position: chr18:50082409-50082176 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 179
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 60, 48

Conread position: 5-248
Cow position: chr18:3193545-3193792 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 165
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 64, 111

Conread position: 5-248
Cow position: chr18:55787769-55788006 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 168
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 62, 104

Conread position: 5-248
Cow position: chr18:55789149-55788912 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 167
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 62, 70

Conread position: 5-250
Cow position: chr18:30586379-30586139 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 169
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 41, 0

Conread position: 5-252
Cow position: chr18:23766572-23766320 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 183
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 56, 243

Conread position: 5-253
Cow position: chr18:26938826-26939072 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 166
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 33

Conread position: 5-255
Cow position: chr18:29356786-29356533 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 5-255
Cow position: chr18:48713390-48713642 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 188
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 60, 155

Conread position: 5-256
Cow position: chr18:11779500-11779744 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 175
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 5-256
Cow position: chr18:21740969-21740722 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 178
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 59, 103

Conread position: 5-257
Cow position: chr18:10575949-10576203 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 184
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 93, 53

Conread position: 5-257
Cow position: chr18:44262466-44262723 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 191
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 38, 176

Conread position: 5-258
Cow position: chr18:5766253-5766507 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 175
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 59, 93

Conread position: 5-258
Cow position: chr18:17005095-17005353 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 169
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 211

Conread position: 5-258
Cow position: chr18:38607064-38607315 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 180
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 59, 170

Conread position: 5-258
Cow position: chr18:56159301-56159555 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 172
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 20, 87

Conread position: 5-259
Cow position: chr18:47511839-47512099 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 194
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 24, 93

Conread position: 5-260
Cow position: chr18:12113536-12113269 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 183
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 60, 190

Conread position: 5-261
Cow position: chr18:15614019-15613764 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 188
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 61, 96

Conread position: 5-261
Cow position: chr18:43950664-43950926 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 181
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 60, 175

Conread position: 5-262
Cow position: chr18:6309924-6310179 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 189
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 62, 15

Conread position: 5-262
Cow position: chr18:11183786-11184038 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 182
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 59, 101

Conread position: 5-262
Cow position: chr18:11867181-11867437 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 173
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 176, 60

Conread position: 5-262
Cow position: chr18:12023794-12023540 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 177
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 52, 109

Conread position: 5-262
Cow position: chr18:18592317-18592571 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 190
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 60, 16

Conread position: 5-262
Cow position: chr18:42432253-42431993 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 199
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 60, 172

Conread position: 5-264
Cow position: chr18:28658068-28657811 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 188
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 60, 92

Conread position: 5-264
Cow position: chr18:45637556-45637316 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 179
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 63, 0

Conread position: 5-264
Cow position: chr18:56183782-56184035 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 187
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 118, 85

Conread position: 5-265
Cow position: chr18:6881507-6881256 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 194
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 61, 45

Conread position: 5-265
Cow position: chr18:10977366-10977112 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 186
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 94, 53

Conread position: 5-265
Cow position: chr18:42431766-42431509 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 184
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 204, 50

Conread position: 5-265
Cow position: chr18:54572452-54572188 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 177
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 11, 104

Conread position: 5-265
Cow position: chr18:55505247-55505504 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 199
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 13, 102

Conread position: 5-266
Cow position: chr18:19193525-19193265 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 184
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 60, 108

Conread position: 5-267
Cow position: chr18:4884670-4884419 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 194
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 89, 29

Conread position: 5-267
Cow position: chr18:9365757-9366022 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 242

Conread position: 5-267
Cow position: chr18:30360294-30360043 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 184
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 225, 28

Conread position: 5-267
Cow position: chr18:45904053-45903796 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 190
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 163, 0

Conread position: 5-268
Cow position: chr18:12242118-12242377 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 186
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 62, 21

Conread position: 5-268
Cow position: chr18:47828668-47828918 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 184
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 60, 18

Conread position: 5-269
Cow position: chr18:17391136-17390889 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 191
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 53, 0

Conread position: 5-269
Cow position: chr18:39662619-39662881 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 177
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 11, 105

Conread position: 5-269
Cow position: chr18:43283917-43283654 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 183
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 12, 35

Conread position: 5-270
Cow position: chr18:28101472-28101737 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 192
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 59, 145

Conread position: 5-271
Cow position: chr18:55000895-55000637 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 192
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 60, 18

Conread position: 5-272
Cow position: chr18:4556328-4556063 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 190
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 17, 99

Conread position: 5-273
Cow position: chr18:2592328-2592062 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 187
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 20, 149

Conread position: 5-273
Cow position: chr18:37002474-37002739 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 192
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 64, 97

Conread position: 5-274
Cow position: chr18:48633633-48633883 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 197
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 56, 0

Conread position: 5-275
Cow position: chr18:1954749-1954478 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 5-275
Cow position: chr18:3018235-3017984 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 187
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 92, 150

Conread position: 5-275
Cow position: chr18:12270351-12270612 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 188
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 103, 35

Conread position: 5-275
Cow position: chr18:42747434-42747698 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 191
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 20, 56

Conread position: 5-276
Cow position: chr18:29058653-29058391 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 101

Conread position: 5-276
Cow position: chr18:39875418-39875150 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 200
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 60, 96

Conread position: 5-280
Cow position: chr18:43555684-43555410 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 183
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 59, 101

Conread position: 5-281
Cow position: chr18:37023712-37023437 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 189
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 59, 245

Conread position: 5-284
Cow position: chr18:15881017-15880722 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 212
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 60, 106

Conread position: 5-285
Cow position: chr18:10656286-10656558 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 187
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 96, 49

Conread position: 5-287
Cow position: chr18:16686496-16686222 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 205
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 60, 216

Conread position: 5-287
Cow position: chr18:25647411-25647124 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 169

Conread position: 5-287
Cow position: chr18:30794275-30794548 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 200
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 96, 60

Conread position: 5-287
Cow position: chr18:33299742-33300029 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 205
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 62, 270

Conread position: 5-288
Cow position: chr18:4796812-4797093 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 207
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 20, 104

Conread position: 5-289
Cow position: chr18:46727441-46727715 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 200
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 234, 38

Conread position: 5-290
Cow position: chr18:43020550-43020276 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 191
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 252, 14

Conread position: 5-292
Cow position: chr18:28923993-28923718 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 18

Conread position: 5-293
Cow position: chr18:34527258-34526968 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 211
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 60, 74

Conread position: 5-302
Cow position: chr18:4496047-4495750 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 205
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 18, 104

Conread position: 5-309
Cow position: chr18:22121040-22120741 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 207
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 60, 86

Conread position: 5-311
Cow position: chr18:39022102-39022406 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 201
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 196, 85

Conread position: 5-360
Cow position: chr18:36201785-36201430 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 254
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 59, 23

Conread position: 5-372
Cow position: chr18:35012467-35012115 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 240
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 44, 0

Conread position: 5-372
Cow position: chr18:56191130-56190736 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 259
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 59, 166

Conread position: 6-197
Cow position: chr18:36184059-36183873 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 9, 86

Conread position: 6-261
Cow position: chr18:38985533-38985791 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 185
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 58, 242

Conread position: 6-262
Cow position: chr18:9089541-9089793 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 183
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 92, 166

Conread position: 6-262
Cow position: chr18:9974482-9974231 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 189
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 63, 98

Conread position: 6-262
Cow position: chr18:39001961-39001716 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 179
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 19, 84

Conread position: 6-267
Cow position: chr18:42479746-42479484 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 192
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 61, 197

Conread position: 6-278
Cow position: chr18:33007902-33008180 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 168

Conread position: 6-280
Cow position: chr18:8299855-8300128 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 206
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 32, 192

Conread position: 6-290
Cow position: chr18:19273257-19272968 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 196
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 59, 34

Conread position: 6-315
Cow position: chr18:51190749-51190444 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 49

Conread position: 7-260
Cow position: chr18:11790776-11791017 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 179
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 96, 26

Conread position: 7-262
Cow position: chr18:12117997-12117754 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 183
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 179, 16

Conread position: 7-267
Cow position: chr18:1399509-1399252 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 178
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 54, 148

Conread position: 7-287
Cow position: chr18:48828939-48828652 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 197
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 9, 166

Conread position: 8-176
Cow position: chr18:6103253-6103085 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 79, 10

Conread position: 8-241
Cow position: chr18:18369519-18369285 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 171
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 56, 101

Conread position: 8-241
Cow position: chr18:44802044-44801812 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 166
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 59, 41

Conread position: 8-250
Cow position: chr18:29648629-29648869 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 173
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 102, 62

Conread position: 8-257
Cow position: chr18:20641647-20641403 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 186
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 41, 94

Conread position: 8-259
Cow position: chr18:25282709-25282462 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 173
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 59, 90

Conread position: 8-260
Cow position: chr18:46453031-46452786 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 179
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 157, 56

Conread position: 8-261
Cow position: chr18:10904693-10904945 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 169
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 59, 41

Conread position: 8-267
Cow position: chr18:46048603-46048853 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 179
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 17, 84

Conread position: 8-269
Cow position: chr18:19646021-19646278 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 174
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 8, 65

Conread position: 8-273
Cow position: chr18:50974452-50974185 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 182
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 14, 102

Conread position: 9-245
Cow position: chr18:14586621-14586389 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 166
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 13, 95

Conread position: 9-263
Cow position: chr18:19687864-19688128 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 192
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 16, 93

Conread position: 9-266
Cow position: chr18:9010567-9010808 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 190
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 55, 9

Conread position: 11-164
Cow position: chr18:50095547-50095396 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 124
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 75, 60

Conread position: 13-200
Cow position: chr18:858668-858860 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 135
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 52, 97

Conread position: 13-257
Cow position: chr18:1571388-1571144 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 176
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 52, 142

Conread position: 13-257
Cow position: chr18:48451907-48452165 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 180
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 51, 130

Conread position: 13-263
Cow position: chr18:46135591-46135841 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 171
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 226, 82

Conread position: 14-190
Cow position: chr18:43065378-43065556 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 55, 0

Conread position: 14-244
Cow position: chr18:7963294-7963508 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 14-244
Cow position: chr18:51594952-51594724 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 55, 38

Conread position: 14-248
Cow position: chr18:2864145-2863907 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 163
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 53, 231

Conread position: 14-258
Cow position: chr18:20174279-20174037 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 168
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 50, 94

Conread position: 14-272
Cow position: chr18:16997102-16997360 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 180
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 23, 46

Conread position: 14-284
Cow position: chr18:51392787-51392523 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 179
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 44, 0

Conread position: 14-289
Cow position: chr18:11322453-11322719 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 178
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 186, 44

Conread position: 14-300
Cow position: chr18:5632115-5632405 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 187
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 199

Conread position: 14-372
Cow position: chr18:27109445-27109093 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 240
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 53, 231

Conread position: 15-198
Cow position: chr18:4602162-4601984 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 131
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 49, 87

Conread position: 15-267
Cow position: chr18:39623652-39623904 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 173
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 52, 18

Conread position: 15-272
Cow position: chr18:34220070-34219806 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 181
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 52, 26

Conread position: 18-291
Cow position: chr18:54130480-54130206 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 195
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 46, 218

Conread position: 24-199
Cow position: chr18:10117364-10117536 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 86, 40

Conread position: 24-238
Cow position: chr18:42751752-42751529 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 38, 183

Conread position: 24-257
Cow position: chr18:30341314-30341090 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 43, 68

Conread position: 24-257
Cow position: chr18:48242049-48242285 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 164
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 40, 78

Conread position: 24-261
Cow position: chr18:49038321-49038559 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 173
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 70, 0

Conread position: 24-262
Cow position: chr18:10214336-10214092 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 165
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 181

Conread position: 24-262
Cow position: chr18:55498930-55499169 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 164
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 8, 54

Conread position: 24-263
Cow position: chr18:42293191-42292958 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 163
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 177, 65

Conread position: 24-264
Cow position: chr18:11907055-11907293 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 162
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 163

Conread position: 24-266
Cow position: chr18:29474600-29474845 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 166
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 41, 157

Conread position: 24-267
Cow position: chr18:47835687-47835927 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 165
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 42, 64

Conread position: 24-273
Cow position: chr18:49841138-49841384 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 189
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 41, 146

Conread position: 25-239
Cow position: chr18:25006628-25006418 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 30, 68

Conread position: 25-254
Cow position: chr18:56181601-56181366 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 170
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 40, 12

Conread position: 25-258
Cow position: chr18:36768944-36768717 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 163
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 40, 70

Conread position: 25-267
Cow position: chr18:24266549-24266303 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 164
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 40, 197

Conread position: 25-273
Cow position: chr18:3085654-3085407 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 167
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 44, 77

Conread position: 26-200
Cow position: chr18:23623771-23623597 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 71

Conread position: 26-273
Cow position: chr18:22056018-22055762 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 180
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 39, 0

Conread position: 26-287
Cow position: chr18:28768226-28768490 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 173
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 39, 220

Conread position: 27-257
Cow position: chr18:49017365-49017584 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 169
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 38, 121

Conread position: 28-262
Cow position: chr18:25598376-25598134 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 166
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 17, 25

Conread position: 29-280
Cow position: chr18:45104580-45104322 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 177
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 30-264
Cow position: chr18:31082483-31082249 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 161
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 10, 41

Conread position: 32-269
Cow position: chr18:31711698-31711456 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 174
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 65, 174

Conread position: 35-198
Cow position: chr18:42954195-42954030 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 5

Conread position: 35-239
Cow position: chr18:2146716-2146504 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 159
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 11, 0

Conread position: 35-368
Cow position: chr18:47967053-47966729 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 232
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 31, 72

Conread position: 36-269
Cow position: chr18:34834362-34834596 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 179
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 29, 108

Conread position: 39-257
Cow position: chr18:23630725-23630515 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 167
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 59, 26

Conread position: 39-278
Cow position: chr18:19883404-19883647 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 166
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 26, 166

Conread position: 39-287
Cow position: chr18:40759081-40759321 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 172
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 26, 71

Conread position: 40-199
Cow position: chr18:49015006-49015160 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 69, 17

Conread position: 40-257
Cow position: chr18:55119745-55119969 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 156
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 27, 0

Conread position: 40-262
Cow position: chr18:15517301-15517075 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 29, 167

Conread position: 40-268
Cow position: chr18:35535269-35535046 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 172
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 49, 25

Conread position: 40-281
Cow position: chr18:52403096-52402860 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 174
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 25, 71

Conread position: 43-242
Cow position: chr18:44483893-44483696 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 22, 61

Conread position: 46-240
Cow position: chr18:52406583-52406768 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 47-369
Cow position: chr18:7076841-7077159 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 219
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 60, 0

Conread position: 48-264
Cow position: chr18:2849388-2849169 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 149
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 51-281
Cow position: chr18:4535129-4534906 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 162
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 16, 45

Conread position: 53-264
Cow position: chr18:11313050-11312838 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 11, 133

Conread position: 59-244
Cow position: chr18:35367292-35367115 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 8, 44

Conread position: 59-262
Cow position: chr18:22790192-22789991 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 143
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 10, 77

Conread position: 62-261
Cow position: chr18:32189613-32189414 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 10, 174

Conread position: 63-236
Cow position: chr18:28930739-28930564 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 46, 26

Conread position: 63-281
Cow position: chr18:53038727-53038949 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 163
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 20, 184

Conread position: 63-351
Cow position: chr18:49324523-49324242 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 211
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 190, 35

Conread position: 70-255
Cow position: chr18:22569160-22568974 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 170, 0

Conread position: 71-271
Cow position: chr18:32252261-32252063 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 161, 0

Conread position: 72-230
Cow position: chr18:43797044-43796889 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 73-250
Cow position: chr18:17660647-17660474 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 28, 0

Conread position: 73-287
Cow position: chr18:9176811-9177024 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 163
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 25, 81

Conread position: 79-265
Cow position: chr18:14830928-14830754 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 79-276
Cow position: chr18:52413879-52414077 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 19, 164

Conread position: 89-262
Cow position: chr18:47705162-47705333 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 114, 13

Conread position: 89-287
Cow position: chr18:23505257-23505451 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 187, 15

Conread position: 91-262
Cow position: chr18:51383468-51383299 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 95-270
Cow position: chr18:47548055-47547881 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 118, 0

Conread position: 103-284
Cow position: chr18:21081952-21081774 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 71, 0

Conread position: 106-309
Cow position: chr18:44917699-44917898 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 183, 140

Conread position: 107-261
Cow position: chr18:38937765-38937918 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 107-272
Cow position: chr18:2773449-2773286 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 140, 0

Conread position: 107-272
Cow position: chr18:2776952-2776789 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 140, 0

Conread position: 107-273
Cow position: chr18:52649404-52649239 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 139, 125

Conread position: 108-285
Cow position: chr18:16378867-16379047 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 141, 0

Conread position: 111-266
Cow position: chr18:2765200-2765350 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 152, 16

Conread position: 116-258
Cow position: chr18:50632490-50632351 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 116, 0

Conread position: 118-245
Cow position: chr18:45558101-45558229 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 97
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 123-281
Cow position: chr18:11672002-11672157 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 126-265
Cow position: chr18:48407701-48407838 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 121, 0

Conread position: 129-279
Cow position: chr18:51178763-51178613 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 107
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 136-267
Cow position: chr18:49603071-49602942 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 72, 76

Conread position: 139-361
Cow position: chr18:49982705-49982927 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 89, 80

Conread position: 261-361
Cow position: chr18:45079214-45079114 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 82
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.