• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-rpigcf0_016288.5
        

               
Conread position:
               
1-212
               

               
Cow position:
               
chr20:34001481-34001266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
14, 209
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr20:23541245-23541002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
58, 106
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr20:15312576-15312837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
61, 208
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr20:11550278-11550541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
61, 172
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr20:32847268-32847517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
96, 57
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr20:5998756-5998481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
63, 37
               

               
Conread position:
               
4-199
               

               
Cow position:
               
chr20:4205883-4206083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
4-239
               

               
Cow position:
               
chr20:8307932-8308167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
39, 169
               

               
Conread position:
               
4-250
               

               
Cow position:
               
chr20:33532222-33532465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
11, 107
               

               
Conread position:
               
4-262
               

               
Cow position:
               
chr20:10208721-10208982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
57, 85
               

               
Conread position:
               
4-277
               

               
Cow position:
               
chr20:5826856-5827127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
65, 132
               

               
Conread position:
               
5-168
               

               
Cow position:
               
chr20:22704208-22704375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
5-180
               

               
Cow position:
               
chr20:10348662-10348843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
5-180
               

               
Cow position:
               
chr20:32830157-32830331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
60, 16
               

               
Conread position:
               
5-185
               

               
Cow position:
               
chr20:34901485-34901669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
5-189
               

               
Cow position:
               
chr20:39019611-39019797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
64, 6
               

               
Conread position:
               
5-191
               

               
Cow position:
               
chr20:23505745-23505931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
60, 43
               

               
Conread position:
               
5-197
               

               
Cow position:
               
chr20:7210956-7211148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
64, 101
               

               
Conread position:
               
5-197
               

               
Cow position:
               
chr20:23103136-23103332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
5-199
               

               
Cow position:
               
chr20:6258144-6257947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
5-199
               

               
Cow position:
               
chr20:6423888-6424078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
59, 96
               

               
Conread position:
               
5-199
               

               
Cow position:
               
chr20:8702993-8702806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
62, 30
               

               
Conread position:
               
5-199
               

               
Cow position:
               
chr20:11482219-11482023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
20, 103
               

               
Conread position:
               
5-199
               

               
Cow position:
               
chr20:22313242-22313049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
81, 56
               

               
Conread position:
               
5-199
               

               
Cow position:
               
chr20:29404260-29404064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
62, 112
               

               
Conread position:
               
5-210
               

               
Cow position:
               
chr20:34918187-34918394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
14, 115
               

               
Conread position:
               
5-211
               

               
Cow position:
               
chr20:28955786-28955578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
10, 106
               

               
Conread position:
               
5-211
               

               
Cow position:
               
chr20:35797524-35797732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
20, 169
               

               
Conread position:
               
5-212
               

               
Cow position:
               
chr20:21928820-21929029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
17, 102
               

               
Conread position:
               
5-230
               

               
Cow position:
               
chr20:22265329-22265110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
60, 90
               

               
Conread position:
               
5-230
               

               
Cow position:
               
chr20:28441246-28441469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
62, 41
               

               
Conread position:
               
5-231
               

               
Cow position:
               
chr20:19616402-19616634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
15, 222
               

               
Conread position:
               
5-236
               

               
Cow position:
               
chr20:31080958-31081186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
59, 19
               

               
Conread position:
               
5-237
               

               
Cow position:
               
chr20:23792527-23792753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
61, 34
               

               
Conread position:
               
5-239
               

               
Cow position:
               
chr20:11542367-11542136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
66, 98
               

               
Conread position:
               
5-239
               

               
Cow position:
               
chr20:19363447-19363212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 210
               

               
Conread position:
               
5-239
               

               
Cow position:
               
chr20:22235231-22235463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
78, 54
               

               
Conread position:
               
5-239
               

               
Cow position:
               
chr20:35710088-35710327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
88, 210
               

               
Conread position:
               
5-240
               

               
Cow position:
               
chr20:39267043-39266806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
45, 120
               

               
Conread position:
               
5-243
               

               
Cow position:
               
chr20:9433503-9433742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
60, 19
               

               
Conread position:
               
5-243
               

               
Cow position:
               
chr20:18622497-18622729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
11, 97
               

               
Conread position:
               
5-243
               

               
Cow position:
               
chr20:33363433-33363672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
98, 229
               

               
Conread position:
               
5-244
               

               
Cow position:
               
chr20:6602956-6603197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
59, 136
               

               
Conread position:
               
5-244
               

               
Cow position:
               
chr20:24834010-24834246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
59, 154
               

               
Conread position:
               
5-244
               

               
Cow position:
               
chr20:38768540-38768307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 90
               

               
Conread position:
               
5-245
               

               
Cow position:
               
chr20:19236994-19237232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
10, 101
               

               
Conread position:
               
5-245
               

               
Cow position:
               
chr20:19459745-19459508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
77, 36
               

               
Conread position:
               
5-245
               

               
Cow position:
               
chr20:36207722-36207971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
62, 13
               

               
Conread position:
               
5-245
               

               
Cow position:
               
chr20:40511841-40511599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
60, 14
               

               
Conread position:
               
5-248
               

               
Cow position:
               
chr20:6096577-6096336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
60, 101
               

               
Conread position:
               
5-249
               

               
Cow position:
               
chr20:11741384-11741146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
20, 14
               

               
Conread position:
               
5-250
               

               
Cow position:
               
chr20:398387-398145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
10, 32
               

               
Conread position:
               
5-251
               

               
Cow position:
               
chr20:14806802-14807051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
5-252
               

               
Cow position:
               
chr20:34597184-34596935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
59, 176
               

               
Conread position:
               
5-257
               

               
Cow position:
               
chr20:4334608-4334362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
217, 76
               

               
Conread position:
               
5-257
               

               
Cow position:
               
chr20:7438937-7438681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
60, 246
               

               
Conread position:
               
5-258
               

               
Cow position:
               
chr20:7442210-7441968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
59, 16
               

               
Conread position:
               
5-258
               

               
Cow position:
               
chr20:16935383-16935146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
64, 77
               

               
Conread position:
               
5-258
               

               
Cow position:
               
chr20:32866271-32866028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
60, 32
               

               
Conread position:
               
5-259
               

               
Cow position:
               
chr20:8556354-8556098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
60, 118
               

               
Conread position:
               
5-260
               

               
Cow position:
               
chr20:6240605-6240349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
64, 99
               

               
Conread position:
               
5-260
               

               
Cow position:
               
chr20:27407958-27407723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
64, 97
               

               
Conread position:
               
5-261
               

               
Cow position:
               
chr20:2298861-2298621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
5-261
               

               
Cow position:
               
chr20:13269543-13269788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
5-261
               

               
Cow position:
               
chr20:20203132-20203388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
54, 226
               

               
Conread position:
               
5-261
               

               
Cow position:
               
chr20:25009721-25009459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
83, 18
               

               
Conread position:
               
5-261
               

               
Cow position:
               
chr20:39417983-39417728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
18, 101
               

               
Conread position:
               
5-262
               

               
Cow position:
               
chr20:8546982-8547239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
60, 44
               

               
Conread position:
               
5-262
               

               
Cow position:
               
chr20:12582034-12581781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
54, 28
               

               
Conread position:
               
5-262
               

               
Cow position:
               
chr20:13752156-13752398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
157, 54
               

               
Conread position:
               
5-262
               

               
Cow position:
               
chr20:23846753-23846490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
5-262
               

               
Cow position:
               
chr20:32463605-32463350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
62, 149
               

               
Conread position:
               
5-262
               

               
Cow position:
               
chr20:36010709-36010967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
15, 107
               

               
Conread position:
               
5-264
               

               
Cow position:
               
chr20:20242016-20242261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
133, 24
               

               
Conread position:
               
5-265
               

               
Cow position:
               
chr20:12420702-12420443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 28
               

               
Conread position:
               
5-265
               

               
Cow position:
               
chr20:18379298-18379553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
92, 53
               

               
Conread position:
               
5-267
               

               
Cow position:
               
chr20:10200263-10200525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
15, 45
               

               
Conread position:
               
5-267
               

               
Cow position:
               
chr20:15118192-15118454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
11, 96
               

               
Conread position:
               
5-267
               

               
Cow position:
               
chr20:24069720-24069981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 226
               

               
Conread position:
               
5-267
               

               
Cow position:
               
chr20:33435252-33434982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
25, 212
               

               
Conread position:
               
5-267
               

               
Cow position:
               
chr20:40781882-40782143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
12, 94
               

               
Conread position:
               
5-268
               

               
Cow position:
               
chr20:2819459-2819721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
16, 119
               

               
Conread position:
               
5-268
               

               
Cow position:
               
chr20:7426271-7426019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
5-269
               

               
Cow position:
               
chr20:22978237-22978508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
5-269
               

               
Cow position:
               
chr20:26996450-26996710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 82
               

               
Conread position:
               
5-269
               

               
Cow position:
               
chr20:34098042-34097774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
55, 220
               

               
Conread position:
               
5-270
               

               
Cow position:
               
chr20:8620234-8619969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
92, 60
               

               
Conread position:
               
5-270
               

               
Cow position:
               
chr20:35364962-35365224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
62, 78
               

               
Conread position:
               
5-270
               

               
Cow position:
               
chr20:39398402-39398661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
59, 98
               

               
Conread position:
               
5-270
               

               
Cow position:
               
chr20:41883652-41883908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
59, 16
               

               
Conread position:
               
5-271
               

               
Cow position:
               
chr20:9267184-9266926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
81, 29
               

               
Conread position:
               
5-271
               

               
Cow position:
               
chr20:39517923-39518189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
62, 109
               

               
Conread position:
               
5-272
               

               
Cow position:
               
chr20:581005-580736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
59, 19
               

               
Conread position:
               
5-275
               

               
Cow position:
               
chr20:36779814-36779543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
39, 106
               

               
Conread position:
               
5-275
               

               
Cow position:
               
chr20:42469677-42469946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
20, 66
               

               
Conread position:
               
5-280
               

               
Cow position:
               
chr20:15822468-15822735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
36, 24
               

               
Conread position:
               
5-281
               

               
Cow position:
               
chr20:38578843-38578573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
104, 65
               

               
Conread position:
               
5-283
               

               
Cow position:
               
chr20:15548980-15548692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
60, 35
               

               
Conread position:
               
5-286
               

               
Cow position:
               
chr20:7362885-7363157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
91, 69
               

               
Conread position:
               
5-287
               

               
Cow position:
               
chr20:9537050-9537331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
10, 168
               

               
Conread position:
               
5-288
               

               
Cow position:
               
chr20:18392345-18392071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
10, 88
               

               
Conread position:
               
5-294
               

               
Cow position:
               
chr20:39728364-39728655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
20, 198
               

               
Conread position:
               
5-300
               

               
Cow position:
               
chr20:20099681-20099388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
19, 89
               

               
Conread position:
               
5-302
               

               
Cow position:
               
chr20:21019480-21019774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
38, 127
               

               
Conread position:
               
5-304
               

               
Cow position:
               
chr20:5636400-5636698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
60, 97
               

               
Conread position:
               
5-305
               

               
Cow position:
               
chr20:1576015-1576309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
83, 50
               

               
Conread position:
               
5-311
               

               
Cow position:
               
chr20:8578164-8578473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
62, 104
               

               
Conread position:
               
5-340
               

               
Cow position:
               
chr20:17845877-17846203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
20, 62
               

               
Conread position:
               
5-372
               

               
Cow position:
               
chr20:3607040-3606669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
94, 53
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr20:7659301-7659104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr20:14572442-14572254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
58, 70
               

               
Conread position:
               
6-212
               

               
Cow position:
               
chr20:13025693-13025486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
14, 60
               

               
Conread position:
               
6-239
               

               
Cow position:
               
chr20:32084164-32083931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
59, 91
               

               
Conread position:
               
6-252
               

               
Cow position:
               
chr20:18320874-18320630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
58, 112
               

               
Conread position:
               
6-255
               

               
Cow position:
               
chr20:14879707-14879956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
68, 12
               

               
Conread position:
               
6-257
               

               
Cow position:
               
chr20:19751225-19751476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
59, 98
               

               
Conread position:
               
6-260
               

               
Cow position:
               
chr20:14433511-14433247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
10, 222
               

               
Conread position:
               
6-261
               

               
Cow position:
               
chr20:22484777-22485032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
16, 93
               

               
Conread position:
               
6-262
               

               
Cow position:
               
chr20:14980594-14980332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
59, 14
               

               
Conread position:
               
6-269
               

               
Cow position:
               
chr20:28594200-28594470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
53, 96
               

               
Conread position:
               
6-272
               

               
Cow position:
               
chr20:9412407-9412671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
61, 40
               

               
Conread position:
               
6-281
               

               
Cow position:
               
chr20:12996092-12995816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
58, 15
               

               
Conread position:
               
6-287
               

               
Cow position:
               
chr20:23064912-23064638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
58, 23
               

               
Conread position:
               
7-243
               

               
Cow position:
               
chr20:38817924-38818155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
60, 150
               

               
Conread position:
               
7-247
               

               
Cow position:
               
chr20:40177164-40177404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
57, 76
               

               
Conread position:
               
7-283
               

               
Cow position:
               
chr20:29805741-29805465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
58, 42
               

               
Conread position:
               
7-286
               

               
Cow position:
               
chr20:40691974-40692261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
17, 96
               

               
Conread position:
               
7-288
               

               
Cow position:
               
chr20:28067508-28067227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
69, 157
               

               
Conread position:
               
8-197
               

               
Cow position:
               
chr20:31740301-31740110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
64, 18
               

               
Conread position:
               
8-248
               

               
Cow position:
               
chr20:28982618-28982860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 162
               

               
Conread position:
               
8-262
               

               
Cow position:
               
chr20:3254972-3255209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
209, 22
               

               
Conread position:
               
8-262
               

               
Cow position:
               
chr20:3599471-3599224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
217, 50
               

               
Conread position:
               
8-267
               

               
Cow position:
               
chr20:22959423-22959169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
7, 89
               

               
Conread position:
               
9-199
               

               
Cow position:
               
chr20:23286403-23286224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
9-258
               

               
Cow position:
               
chr20:15569026-15568779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
15, 96
               

               
Conread position:
               
9-261
               

               
Cow position:
               
chr20:28605124-28605382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 162
               

               
Conread position:
               
10-187
               

               
Cow position:
               
chr20:17530494-17530314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
55, 67
               

               
Conread position:
               
10-257
               

               
Cow position:
               
chr20:25162207-25161954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
10-257
               

               
Cow position:
               
chr20:38868565-38868801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
55, 85
               

               
Conread position:
               
10-261
               

               
Cow position:
               
chr20:7738305-7738058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
55, 80
               

               
Conread position:
               
10-280
               

               
Cow position:
               
chr20:23870891-23870627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
86, 48
               

               
Conread position:
               
11-258
               

               
Cow position:
               
chr20:22064994-22065236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
86, 31
               

               
Conread position:
               
12-250
               

               
Cow position:
               
chr20:21204283-21204516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
57, 74
               

               
Conread position:
               
12-348
               

               
Cow position:
               
chr20:13983286-13983623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
216, 41
               

               
Conread position:
               
13-262
               

               
Cow position:
               
chr20:746871-747114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
54, 90
               

               
Conread position:
               
13-295
               

               
Cow position:
               
chr20:5078548-5078835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
14-192
               

               
Cow position:
               
chr20:24000872-24000693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
50, 93
               

               
Conread position:
               
14-239
               

               
Cow position:
               
chr20:38670684-38670901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
53, 72
               

               
Conread position:
               
14-260
               

               
Cow position:
               
chr20:17251641-17251892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
53, 95
               

               
Conread position:
               
14-269
               

               
Cow position:
               
chr20:29844976-29845231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
51, 42
               

               
Conread position:
               
14-281
               

               
Cow position:
               
chr20:21714681-21714961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
45, 88
               

               
Conread position:
               
15-280
               

               
Cow position:
               
chr20:33976408-33976672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
49, 171
               

               
Conread position:
               
15-290
               

               
Cow position:
               
chr20:33439051-33438778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
24, 67
               

               
Conread position:
               
15-357
               

               
Cow position:
               
chr20:34777112-34777449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
72, 43
               

               
Conread position:
               
18-267
               

               
Cow position:
               
chr20:38089841-38090092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
21-185
               

               
Cow position:
               
chr20:7384340-7384167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
31, 130
               

               
Conread position:
               
23-215
               

               
Cow position:
               
chr20:7624312-7624121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
23-257
               

               
Cow position:
               
chr20:16941355-16941119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
23, 136
               

               
Conread position:
               
24-203
               

               
Cow position:
               
chr20:35192713-35192887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
41, 79
               

               
Conread position:
               
24-212
               

               
Cow position:
               
chr20:23506534-23506346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
41, 78
               

               
Conread position:
               
24-244
               

               
Cow position:
               
chr20:6903252-6903471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
146, 76
               

               
Conread position:
               
24-258
               

               
Cow position:
               
chr20:21345363-21345603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
41, 87
               

               
Conread position:
               
24-302
               

               
Cow position:
               
chr20:33067428-33067143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
40, 10
               

               
Conread position:
               
24-372
               

               
Cow position:
               
chr20:20056549-20056218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
40, 85
               

               
Conread position:
               
25-261
               

               
Cow position:
               
chr20:12239747-12239510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
55, 14
               

               
Conread position:
               
25-274
               

               
Cow position:
               
chr20:16548341-16548095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
40, 79
               

               
Conread position:
               
26-265
               

               
Cow position:
               
chr20:16492009-16492250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
38, 77
               

               
Conread position:
               
26-267
               

               
Cow position:
               
chr20:11008108-11008349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
61, 82
               

               
Conread position:
               
26-278
               

               
Cow position:
               
chr20:22030258-22030506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
39, 21
               

               
Conread position:
               
30-245
               

               
Cow position:
               
chr20:39962517-39962732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
35, 79
               

               
Conread position:
               
30-257
               

               
Cow position:
               
chr20:17100302-17100534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
32, 143
               

               
Conread position:
               
30-263
               

               
Cow position:
               
chr20:16818357-16818597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
35, 194
               

               
Conread position:
               
31-280
               

               
Cow position:
               
chr20:38514724-38514968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
36, 59
               

               
Conread position:
               
35-315
               

               
Cow position:
               
chr20:10772150-10772432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
30, 150
               

               
Conread position:
               
40-245
               

               
Cow position:
               
chr20:4787062-4786861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
25, 121
               

               
Conread position:
               
42-245
               

               
Cow position:
               
chr20:24902345-24902136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
44-261
               

               
Cow position:
               
chr20:5702681-5702897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
39, 22
               

               
Conread position:
               
48-240
               

               
Cow position:
               
chr20:21999957-22000153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
17, 126
               

               
Conread position:
               
48-350
               

               
Cow position:
               
chr20:2169762-2169476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
39, 80
               

               
Conread position:
               
49-242
               

               
Cow position:
               
chr20:39212621-39212425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
16, 61
               

               
Conread position:
               
49-258
               

               
Cow position:
               
chr20:7756658-7756458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
54, 16
               

               
Conread position:
               
50-291
               

               
Cow position:
               
chr20:40157862-40158103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
16, 59
               

               
Conread position:
               
52-267
               

               
Cow position:
               
chr20:12126339-12126125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
53-315
               

               
Cow position:
               
chr20:7709821-7709550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
54-273
               

               
Cow position:
               
chr20:21815530-21815742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
27, 46
               

               
Conread position:
               
62-237
               

               
Cow position:
               
chr20:14620334-14620152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
63-235
               

               
Cow position:
               
chr20:6358591-6358767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
63-342
               

               
Cow position:
               
chr20:26723698-26723431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
138, 32
               

               
Conread position:
               
67-197
               

               
Cow position:
               
chr20:1009725-1009597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
70-262
               

               
Cow position:
               
chr20:19060856-19060665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
42, 104
               

               
Conread position:
               
75-281
               

               
Cow position:
               
chr20:11043489-11043281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
34, 102
               

               
Conread position:
               
87-267
               

               
Cow position:
               
chr20:3148684-3148859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
93-309
               

               
Cow position:
               
chr20:35591644-35591432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
17, 69
               

               
Conread position:
               
96-243
               

               
Cow position:
               
chr20:8912491-8912343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
97-269
               

               
Cow position:
               
chr20:15529870-15530039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
100-265
               

               
Cow position:
               
chr20:15766123-15766288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
67, 14
               

               
Conread position:
               
104-287
               

               
Cow position:
               
chr20:206633-206451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
124, 95
               

               
Conread position:
               
107-244
               

               
Cow position:
               
chr20:24097020-24097157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
107-258
               

               
Cow position:
               
chr20:20158155-20158306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
94, 98
               

               
Conread position:
               
107-305
               

               
Cow position:
               
chr20:35445084-35444889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
184, 141
               

               
Conread position:
               
108-262
               

               
Cow position:
               
chr20:3564180-3564328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
119-265
               

               
Cow position:
               
chr20:630556-630700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
130-305
               

               
Cow position:
               
chr20:19834788-19834614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
148, 110
               

               
Conread position:
               
142-371
               

               
Cow position:
               
chr20:36023346-36023121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
105, 0
               
Show alignments to all cow chromosomes.