Cow genome map
| Conread name: | Ss1.1-rpigcf0_016288.5 |
| Conread position: | 1-199 |
| Cow position: | chr21:28442679-28442864 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 1-239 |
| Cow position: | chr21:47215248-47215023 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 65, 87 |
| Conread position: | 1-245 |
| Cow position: | chr21:28190965-28191210 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 58, 51 |
| Conread position: | 1-251 |
| Cow position: | chr21:28211134-28211376 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 66, 33 |
| Conread position: | 1-261 |
| Cow position: | chr21:47465188-47464924 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 43, 12 |
| Conread position: | 1-277 |
| Cow position: | chr21:42841665-42841388 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 16, 36 |
| Conread position: | 1-284 |
| Cow position: | chr21:3818140-3818422 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 16, 119 |
| Conread position: | 1-286 |
| Cow position: | chr21:16696301-16696590 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 15, 105 |
| Conread position: | 1-286 |
| Cow position: | chr21:46264105-46264389 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 56 |
| Conread position: | 1-289 |
| Cow position: | chr21:30835295-30835584 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 15, 152 |
| Conread position: | 1-292 |
| Cow position: | chr21:20260388-20260090 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 108 |
| Conread position: | 1-330 |
| Cow position: | chr21:34010463-34010134 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 221 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 63, 17 |
| Conread position: | 2-257 |
| Cow position: | chr21:12339573-12339811 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 68, 35 |
| Conread position: | 4-197 |
| Cow position: | chr21:45971237-45971044 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 18, 99 |
| Conread position: | 4-212 |
| Cow position: | chr21:8235616-8235417 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 61, 15 |
| Conread position: | 4-217 |
| Cow position: | chr21:18845079-18844862 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 4-262 |
| Cow position: | chr21:6713589-6713328 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 63, 42 |
| Conread position: | 4-264 |
| Cow position: | chr21:802359-802120 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 4-269 |
| Cow position: | chr21:46973-47244 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 63, 219 |
| Conread position: | 5-122 |
| Cow position: | chr21:12617074-12617195 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 5-146 |
| Cow position: | chr21:21077263-21077405 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 60, 101 |
| Conread position: | 5-154 |
| Cow position: | chr21:28443437-28443285 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 5-162 |
| Cow position: | chr21:18041911-18041752 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 5-172 |
| Cow position: | chr21:32535911-32536082 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 5-175 |
| Cow position: | chr21:2904536-2904370 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 92, 32 |
| Conread position: | 5-175 |
| Cow position: | chr21:4795164-4795334 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 59, 13 |
| Conread position: | 5-179 |
| Cow position: | chr21:2679493-2679669 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 64, 99 |
| Conread position: | 5-183 |
| Cow position: | chr21:13495477-13495659 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 5-185 |
| Cow position: | chr21:20262396-20262217 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 54, 41 |
| Conread position: | 5-191 |
| Cow position: | chr21:2367271-2367456 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 62, 92 |
| Conread position: | 5-193 |
| Cow position: | chr21:17856484-17856670 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 60, 13 |
| Conread position: | 5-193 |
| Cow position: | chr21:33360097-33359917 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 20, 88 |
| Conread position: | 5-194 |
| Cow position: | chr21:4281935-4281748 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 21, 92 |
| Conread position: | 5-195 |
| Cow position: | chr21:23192577-23192381 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 5-196 |
| Cow position: | chr21:40432386-40432574 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 20, 72 |
| Conread position: | 5-197 |
| Cow position: | chr21:7394318-7394510 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 13, 160 |
| Conread position: | 5-197 |
| Cow position: | chr21:10601437-10601245 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 59, 37 |
| Conread position: | 5-197 |
| Cow position: | chr21:15584482-15584289 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 60, 19 |
| Conread position: | 5-197 |
| Cow position: | chr21:46552169-46551973 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 5-198 |
| Cow position: | chr21:297689-297885 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 5, 45 |
| Conread position: | 5-198 |
| Cow position: | chr21:19363526-19363328 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 5-199 |
| Cow position: | chr21:724949-724753 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 160 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 164 |
| Conread position: | 5-199 |
| Cow position: | chr21:5426876-5427072 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 14, 101 |
| Conread position: | 5-199 |
| Cow position: | chr21:11359976-11360167 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 5-199 |
| Cow position: | chr21:46860167-46859990 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 5-206 |
| Cow position: | chr21:44515200-44515403 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 159 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 26, 43 |
| Conread position: | 5-211 |
| Cow position: | chr21:1591489-1591698 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 5-212 |
| Cow position: | chr21:5898462-5898257 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 61, 83 |
| Conread position: | 5-212 |
| Cow position: | chr21:9940257-9940043 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 34, 181 |
| Conread position: | 5-212 |
| Cow position: | chr21:10561647-10561438 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 54, 112 |
| Conread position: | 5-212 |
| Cow position: | chr21:18828369-18828157 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 67, 24 |
| Conread position: | 5-212 |
| Cow position: | chr21:20192834-20193039 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 59, 100 |
| Conread position: | 5-212 |
| Cow position: | chr21:34391038-34390830 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 54, 97 |
| Conread position: | 5-212 |
| Cow position: | chr21:43357324-43357111 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 17, 136 |
| Conread position: | 5-217 |
| Cow position: | chr21:11198212-11198000 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 11, 99 |
| Conread position: | 5-217 |
| Cow position: | chr21:25382950-25383176 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 5-218 |
| Cow position: | chr21:16187871-16187656 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 167 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 5-236 |
| Cow position: | chr21:44214061-44214295 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 179 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 56, 167 |
| Conread position: | 5-236 |
| Cow position: | chr21:45355773-45356002 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 60, 75 |
| Conread position: | 5-237 |
| Cow position: | chr21:35354470-35354703 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 59, 119 |
| Conread position: | 5-238 |
| Cow position: | chr21:45906684-45906452 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 61, 101 |
| Conread position: | 5-239 |
| Cow position: | chr21:15911336-15911572 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 32, 165 |
| Conread position: | 5-239 |
| Cow position: | chr21:38121038-38121273 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 5-240 |
| Cow position: | chr21:42540279-42540049 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 98, 54 |
| Conread position: | 5-243 |
| Cow position: | chr21:30990333-30990111 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 5-244 |
| Cow position: | chr21:8206709-8206947 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 60, 14 |
| Conread position: | 5-244 |
| Cow position: | chr21:12723097-12723328 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 92, 37 |
| Conread position: | 5-244 |
| Cow position: | chr21:27229857-27229618 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 61, 93 |
| Conread position: | 5-245 |
| Cow position: | chr21:10001011-10001253 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 12, 108 |
| Conread position: | 5-245 |
| Cow position: | chr21:16569838-16570077 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 62, 91 |
| Conread position: | 5-248 |
| Cow position: | chr21:25764575-25764816 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 98, 65 |
| Conread position: | 5-252 |
| Cow position: | chr21:7673063-7673307 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 107, 53 |
| Conread position: | 5-252 |
| Cow position: | chr21:33414148-33413903 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 64, 132 |
| Conread position: | 5-253 |
| Cow position: | chr21:22860936-22861189 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 62, 189 |
| Conread position: | 5-254 |
| Cow position: | chr21:45262875-45262623 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 5-255 |
| Cow position: | chr21:22465134-22465376 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 61, 94 |
| Conread position: | 5-257 |
| Cow position: | chr21:28733975-28733721 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 60, 15 |
| Conread position: | 5-257 |
| Cow position: | chr21:29002221-29001967 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 59, 212 |
| Conread position: | 5-257 |
| Cow position: | chr21:30849011-30848751 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 5-257 |
| Cow position: | chr21:32559422-32559175 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 187 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 5-259 |
| Cow position: | chr21:34654014-34654263 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 19 |
| Conread position: | 5-260 |
| Cow position: | chr21:957609-957863 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 16, 35 |
| Conread position: | 5-260 |
| Cow position: | chr21:36297427-36297685 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 190 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 60, 247 |
| Conread position: | 5-260 |
| Cow position: | chr21:37479896-37480156 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 199 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 94, 60 |
| Conread position: | 5-261 |
| Cow position: | chr21:30222281-30222539 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 189 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 62, 44 |
| Conread position: | 5-261 |
| Cow position: | chr21:30592367-30592117 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 105, 65 |
| Conread position: | 5-262 |
| Cow position: | chr21:641520-641780 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 247 |
| Conread position: | 5-262 |
| Cow position: | chr21:6833985-6834246 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 15, 98 |
| Conread position: | 5-262 |
| Cow position: | chr21:9416183-9416446 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 5-262 |
| Cow position: | chr21:12462033-12461774 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 60, 219 |
| Conread position: | 5-262 |
| Cow position: | chr21:17511714-17511972 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 177 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 11, 102 |
| Conread position: | 5-262 |
| Cow position: | chr21:17875255-17874994 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 11, 97 |
| Conread position: | 5-262 |
| Cow position: | chr21:19258766-19259012 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 18, 47 |
| Conread position: | 5-262 |
| Cow position: | chr21:23586817-23587076 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 60, 217 |
| Conread position: | 5-262 |
| Cow position: | chr21:24598598-24598850 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 91, 58 |
| Conread position: | 5-262 |
| Cow position: | chr21:38900715-38900967 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 60, 76 |
| Conread position: | 5-262 |
| Cow position: | chr21:41590623-41590370 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 92, 60 |
| Conread position: | 5-262 |
| Cow position: | chr21:41621061-41621324 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 60, 198 |
| Conread position: | 5-262 |
| Cow position: | chr21:47719362-47719108 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 87, 38 |
| Conread position: | 5-263 |
| Cow position: | chr21:11740179-11739924 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 60, 26 |
| Conread position: | 5-263 |
| Cow position: | chr21:13840259-13840525 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 15, 190 |
| Conread position: | 5-263 |
| Cow position: | chr21:19673741-19674006 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 20, 234 |
| Conread position: | 5-263 |
| Cow position: | chr21:33263786-33264040 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 82, 53 |
| Conread position: | 5-265 |
| Cow position: | chr21:643265-643520 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 28 |
| Conread position: | 5-265 |
| Cow position: | chr21:25344808-25345059 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 10, 81 |
| Conread position: | 5-266 |
| Cow position: | chr21:21169558-21169297 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 17, 105 |
| Conread position: | 5-266 |
| Cow position: | chr21:22210307-22210047 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 61, 97 |
| Conread position: | 5-267 |
| Cow position: | chr21:10263970-10264232 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 48, 197 |
| Conread position: | 5-267 |
| Cow position: | chr21:23980245-23979982 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 17, 86 |
| Conread position: | 5-267 |
| Cow position: | chr21:32339801-32339540 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 20, 102 |
| Conread position: | 5-267 |
| Cow position: | chr21:41155800-41156068 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 64, 208 |
| Conread position: | 5-267 |
| Cow position: | chr21:44251898-44251643 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 5-268 |
| Cow position: | chr21:29069392-29069125 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 5-269 |
| Cow position: | chr21:13128157-13127899 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 79, 14 |
| Conread position: | 5-269 |
| Cow position: | chr21:19196226-19195964 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 11, 93 |
| Conread position: | 5-269 |
| Cow position: | chr21:29214214-29213958 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 5-270 |
| Cow position: | chr21:22718842-22718581 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 20, 56 |
| Conread position: | 5-271 |
| Cow position: | chr21:47764178-47763914 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 59, 98 |
| Conread position: | 5-273 |
| Cow position: | chr21:14452173-14452434 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 61, 77 |
| Conread position: | 5-273 |
| Cow position: | chr21:29484916-29485184 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 169 |
| Conread position: | 5-273 |
| Cow position: | chr21:44825948-44825679 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 199 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 91, 52 |
| Conread position: | 5-276 |
| Cow position: | chr21:28626177-28626445 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 57, 138 |
| Conread position: | 5-277 |
| Cow position: | chr21:18790623-18790358 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 10, 99 |
| Conread position: | 5-279 |
| Cow position: | chr21:26244857-26245126 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 193 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 5-280 |
| Cow position: | chr21:18289601-18289871 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 61, 26 |
| Conread position: | 5-283 |
| Cow position: | chr21:42135683-42135401 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 201 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 60, 276 |
| Conread position: | 5-284 |
| Cow position: | chr21:13365275-13365561 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 59, 157 |
| Conread position: | 5-284 |
| Cow position: | chr21:24642455-24642729 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 17, 170 |
| Conread position: | 5-285 |
| Cow position: | chr21:36795537-36795821 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 203 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 60, 104 |
| Conread position: | 5-285 |
| Cow position: | chr21:36909871-36910149 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 10, 82 |
| Conread position: | 5-286 |
| Cow position: | chr21:42384446-42384728 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 204 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 19, 98 |
| Conread position: | 5-287 |
| Cow position: | chr21:395807-396089 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 61, 87 |
| Conread position: | 5-287 |
| Cow position: | chr21:18800592-18800314 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 202 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 143, 59 |
| Conread position: | 5-294 |
| Cow position: | chr21:12801810-12801518 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 82, 32 |
| Conread position: | 5-295 |
| Cow position: | chr21:2810225-2809936 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 76, 165 |
| Conread position: | 5-298 |
| Cow position: | chr21:45921121-45920826 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 59, 93 |
| Conread position: | 5-305 |
| Cow position: | chr21:7581969-7581665 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 216 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 60, 99 |
| Conread position: | 5-309 |
| Cow position: | chr21:6051444-6051746 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 211 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 57, 71 |
| Conread position: | 5-340 |
| Cow position: | chr21:33562950-33563284 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 233 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 11, 55 |
| Conread position: | 5-361 |
| Cow position: | chr21:10514741-10515082 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 57, 212 |
| Conread position: | 5-361 |
| Cow position: | chr21:27624646-27624997 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 84 |
| Conread position: | 5-372 |
| Cow position: | chr21:30250253-30249919 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 5-372 |
| Cow position: | chr21:35569442-35569081 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 56, 26 |
| Conread position: | 6-163 |
| Cow position: | chr21:12960961-12960802 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 69, 61 |
| Conread position: | 6-163 |
| Cow position: | chr21:16612563-16612721 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 59, 40 |
| Conread position: | 6-198 |
| Cow position: | chr21:20418747-20418551 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 6-245 |
| Cow position: | chr21:48234222-48233987 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 160, 81 |
| Conread position: | 6-256 |
| Cow position: | chr21:15544280-15544041 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 58, 97 |
| Conread position: | 6-262 |
| Cow position: | chr21:8426379-8426638 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 196 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 37, 115 |
| Conread position: | 6-263 |
| Cow position: | chr21:1511229-1511487 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 58, 163 |
| Conread position: | 6-263 |
| Cow position: | chr21:23535651-23535909 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 16, 75 |
| Conread position: | 6-263 |
| Cow position: | chr21:37790065-37789805 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 9, 206 |
| Conread position: | 6-267 |
| Cow position: | chr21:3585425-3585171 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 58, 42 |
| Conread position: | 6-267 |
| Cow position: | chr21:11645032-11644769 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 249 |
| Conread position: | 6-273 |
| Cow position: | chr21:17559991-17559719 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 59, 95 |
| Conread position: | 6-273 |
| Cow position: | chr21:35437527-35437285 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 6-273 |
| Cow position: | chr21:41974437-41974170 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 63, 134 |
| Conread position: | 6-275 |
| Cow position: | chr21:32297569-32297311 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 50, 94 |
| Conread position: | 6-281 |
| Cow position: | chr21:27569222-27568962 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 204 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 93, 17 |
| Conread position: | 6-372 |
| Cow position: | chr21:13488460-13488813 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 259 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 59, 202 |
| Conread position: | 6-372 |
| Cow position: | chr21:39401532-39401901 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 260 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 58, 95 |
| Conread position: | 7-261 |
| Cow position: | chr21:33982866-33982617 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 190 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 60, 11 |
| Conread position: | 7-262 |
| Cow position: | chr21:8349267-8349521 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 58, 166 |
| Conread position: | 7-267 |
| Cow position: | chr21:9990455-9990708 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 7-361 |
| Cow position: | chr21:33350685-33351018 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 249 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 94, 51 |
| Conread position: | 8-151 |
| Cow position: | chr21:27079899-27079752 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 8-185 |
| Cow position: | chr21:37014463-37014288 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 12, 75 |
| Conread position: | 8-233 |
| Cow position: | chr21:33997287-33997063 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 77, 197 |
| Conread position: | 8-262 |
| Cow position: | chr21:4280732-4280482 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 56, 42 |
| Conread position: | 8-263 |
| Cow position: | chr21:18155630-18155366 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 12, 204 |
| Conread position: | 8-265 |
| Cow position: | chr21:24858255-24858513 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 104 |
| Conread position: | 8-283 |
| Cow position: | chr21:42414160-42413882 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 57, 34 |
| Conread position: | 8-285 |
| Cow position: | chr21:18850288-18850007 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 54, 158 |
| Conread position: | 8-372 |
| Cow position: | chr21:5392600-5392247 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 203 |
| Conread position: | 9-262 |
| Cow position: | chr21:16152377-16152636 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 58, 98 |
| Conread position: | 9-262 |
| Cow position: | chr21:18060016-18059763 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 7, 72 |
| Conread position: | 9-281 |
| Cow position: | chr21:33661-33930 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 16, 95 |
| Conread position: | 9-281 |
| Cow position: | chr21:28924055-28924324 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 13, 31 |
| Conread position: | 9-290 |
| Cow position: | chr21:10004945-10004664 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 59, 10 |
| Conread position: | 9-341 |
| Cow position: | chr21:28919582-28919258 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 56, 10 |
| Conread position: | 10-240 |
| Cow position: | chr21:35899786-35900016 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 59, 99 |
| Conread position: | 10-263 |
| Cow position: | chr21:13656687-13656437 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 191, 48 |
| Conread position: | 11-195 |
| Cow position: | chr21:33727522-33727331 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 55, 171 |
| Conread position: | 11-273 |
| Cow position: | chr21:868982-868722 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 56, 70 |
| Conread position: | 12-206 |
| Cow position: | chr21:46143903-46144098 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 53, 7 |
| Conread position: | 12-262 |
| Cow position: | chr21:829258-829014 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 85, 27 |
| Conread position: | 13-249 |
| Cow position: | chr21:21077552-21077782 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 52, 77 |
| Conread position: | 13-279 |
| Cow position: | chr21:23322131-23321866 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 14-161 |
| Cow position: | chr21:41598064-41598214 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 14-199 |
| Cow position: | chr21:22014133-22014322 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 51, 66 |
| Conread position: | 14-255 |
| Cow position: | chr21:31691428-31691670 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 53, 103 |
| Conread position: | 14-258 |
| Cow position: | chr21:41579702-41579949 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 71, 53 |
| Conread position: | 14-261 |
| Cow position: | chr21:4399749-4399997 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 55, 105 |
| Conread position: | 14-261 |
| Cow position: | chr21:17890249-17890498 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 52, 101 |
| Conread position: | 14-267 |
| Cow position: | chr21:977198-976943 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 206, 16 |
| Conread position: | 14-267 |
| Cow position: | chr21:17183869-17184117 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 51, 97 |
| Conread position: | 14-267 |
| Cow position: | chr21:42007517-42007262 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 51, 133 |
| Conread position: | 14-269 |
| Cow position: | chr21:5464693-5464942 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 51, 132 |
| Conread position: | 14-291 |
| Cow position: | chr21:6997886-6998174 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 50, 96 |
| Conread position: | 15-368 |
| Cow position: | chr21:28882082-28882437 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 233 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 49, 189 |
| Conread position: | 16-270 |
| Cow position: | chr21:45473804-45473554 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 231, 73 |
| Conread position: | 18-267 |
| Cow position: | chr21:37299414-37299662 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 184 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 73, 31 |
| Conread position: | 18-271 |
| Cow position: | chr21:41522457-41522211 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 53, 99 |
| Conread position: | 24-211 |
| Cow position: | chr21:30607133-30606942 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 24-260 |
| Cow position: | chr21:20152910-20153151 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 41, 87 |
| Conread position: | 24-266 |
| Cow position: | chr21:19060131-19059895 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 41, 68 |
| Conread position: | 24-269 |
| Cow position: | chr21:30231735-30231499 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 24-278 |
| Cow position: | chr21:47363782-47363524 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 41, 85 |
| Conread position: | 25-258 |
| Cow position: | chr21:742245-742470 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 41, 21 |
| Conread position: | 26-199 |
| Cow position: | chr21:46599320-46599493 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 37, 21 |
| Conread position: | 26-291 |
| Cow position: | chr21:37345139-37344881 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 39, 76 |
| Conread position: | 27-290 |
| Cow position: | chr21:40589526-40589261 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 37, 154 |
| Conread position: | 28-294 |
| Cow position: | chr21:30256304-30256050 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 181 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 31-201 |
| Cow position: | chr21:674655-674819 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 31-261 |
| Cow position: | chr21:20160641-20160868 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 34, 68 |
| Conread position: | 31-285 |
| Cow position: | chr21:29014597-29014340 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 67, 93 |
| Conread position: | 32-235 |
| Cow position: | chr21:42209667-42209461 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 35-287 |
| Cow position: | chr21:734563-734809 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 30, 64 |
| Conread position: | 38-257 |
| Cow position: | chr21:14126258-14126469 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 29, 19 |
| Conread position: | 40-261 |
| Cow position: | chr21:28030260-28030482 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 27, 130 |
| Conread position: | 42-287 |
| Cow position: | chr21:10538276-10538037 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 44-235 |
| Cow position: | chr21:47160199-47160386 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 52, 21 |
| Conread position: | 45-238 |
| Cow position: | chr21:37235362-37235556 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 20, 37 |
| Conread position: | 45-267 |
| Cow position: | chr21:71563-71783 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 21, 62 |
| Conread position: | 49-259 |
| Cow position: | chr21:19240895-19240682 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 7, 206 |
| Conread position: | 63-301 |
| Cow position: | chr21:9027309-9027556 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 50, 147 |
| Conread position: | 64-265 |
| Cow position: | chr21:28599887-28600080 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 96, 14 |
| Conread position: | 65-229 |
| Cow position: | chr21:20183070-20183233 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 65-261 |
| Cow position: | chr21:7768433-7768632 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 22, 157 |
| Conread position: | 65-281 |
| Cow position: | chr21:30980579-30980364 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 70-220 |
| Cow position: | chr21:12104368-12104519 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 70-261 |
| Cow position: | chr21:41287791-41287599 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 70-372 |
| Cow position: | chr21:7268879-7268579 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 71-281 |
| Cow position: | chr21:11057870-11057665 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 178, 18 |
| Conread position: | 75-245 |
| Cow position: | chr21:41046813-41046984 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 28, 87 |
| Conread position: | 76-279 |
| Cow position: | chr21:19360167-19359964 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 77-256 |
| Cow position: | chr21:19868946-19868766 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 9, 45 |
| Conread position: | 77-277 |
| Cow position: | chr21:36682332-36682535 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 90-265 |
| Cow position: | chr21:21615806-21615976 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 97-262 |
| Cow position: | chr21:24875381-24875548 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 104-265 |
| Cow position: | chr21:39393785-39393945 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 113, 144 |
| Conread position: | 104-276 |
| Cow position: | chr21:41610204-41610379 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 107-250 |
| Cow position: | chr21:46451912-46451771 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 107-269 |
| Cow position: | chr21:20163748-20163905 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 107-304 |
| Cow position: | chr21:7088640-7088847 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 107-372 |
| Cow position: | chr21:30119734-30120005 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 140, 254 |
| Conread position: | 108-261 |
| Cow position: | chr21:22850963-22851112 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 92, 14 |
| Conread position: | 109-262 |
| Cow position: | chr21:17252936-17252781 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 132, 51 |
| Conread position: | 110-276 |
| Cow position: | chr21:5342051-5341888 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 118-287 |
| Cow position: | chr21:14228229-14228061 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 146, 0 |
| Conread position: | 119-287 |
| Cow position: | chr21:5486462-5486293 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 64, 96 |
| Conread position: | 121-261 |
| Cow position: | chr21:15012493-15012631 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 123-339 |
| Cow position: | chr21:28824170-28823946 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 47, 59 |
| Conread position: | 136-372 |
| Cow position: | chr21:12200169-12200409 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 177, 0 |
Show alignments to all cow chromosomes.