Cow genome map

Conread name: Ss1.1-rpigcf0_016288.5

Conread position: 1-198
Cow position: chr25:27801156-27801343 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 65, 19

Conread position: 1-199
Cow position: chr25:24051830-24052032 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 157
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 92, 0

Conread position: 1-236
Cow position: chr25:14720622-14720847 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 177
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 51, 0

Conread position: 1-238
Cow position: chr25:17975500-17975273 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 170
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 64, 0

Conread position: 1-244
Cow position: chr25:20133445-20133206 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 172
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 64, 105

Conread position: 1-257
Cow position: chr25:18721247-18720996 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 189
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 107, 32

Conread position: 1-260
Cow position: chr25:16921923-16921665 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 182
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 201, 45

Conread position: 1-262
Cow position: chr25:4521967-4521711 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 194
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 63, 49

Conread position: 1-262
Cow position: chr25:11661949-11661689 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 187
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 63, 103

Conread position: 1-263
Cow position: chr25:15634609-15634335 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 184
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 209

Conread position: 1-267
Cow position: chr25:20008002-20008265 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 192
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 63, 78

Conread position: 1-269
Cow position: chr25:18202059-18201795 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 186
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 73

Conread position: 1-273
Cow position: chr25:12609212-12609479 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 198
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 96, 58

Conread position: 1-279
Cow position: chr25:35826407-35826135 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 196
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 96, 31

Conread position: 2-269
Cow position: chr25:14791622-14791885 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 197
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 62, 171

Conread position: 3-151
Cow position: chr25:36033307-36033456 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 61, 118

Conread position: 3-245
Cow position: chr25:17119610-17119854 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 172
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 19, 80

Conread position: 4-168
Cow position: chr25:5341523-5341688 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 62, 144

Conread position: 4-183
Cow position: chr25:35333028-35333208 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 95

Conread position: 4-198
Cow position: chr25:32191541-32191725 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 91, 0

Conread position: 4-212
Cow position: chr25:11131451-11131663 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 148
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 67, 179

Conread position: 4-239
Cow position: chr25:2136224-2136456 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 168
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 63, 151

Conread position: 4-240
Cow position: chr25:4245560-4245777 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 54, 0

Conread position: 4-264
Cow position: chr25:21893206-21893468 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 183
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 58, 239

Conread position: 4-264
Cow position: chr25:38981973-38982222 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 180
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 63, 88

Conread position: 4-265
Cow position: chr25:21668116-21668379 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 195
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 60, 207

Conread position: 4-277
Cow position: chr25:15254461-15254204 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 199
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 31, 0

Conread position: 5-144
Cow position: chr25:16001653-16001514 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 59, 101

Conread position: 5-145
Cow position: chr25:11054776-11054916 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 5-164
Cow position: chr25:7801011-7801172 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 60, 41

Conread position: 5-188
Cow position: chr25:9642228-9642413 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 130
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 62, 14

Conread position: 5-192
Cow position: chr25:7449679-7449859 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 60, 26

Conread position: 5-195
Cow position: chr25:16570486-16570664 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 148
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 125, 15

Conread position: 5-195
Cow position: chr25:26136952-26136761 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 91

Conread position: 5-197
Cow position: chr25:3145715-3145908 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 11, 92

Conread position: 5-197
Cow position: chr25:16064760-16064956 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 5-197
Cow position: chr25:18564360-18564550 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 20, 83

Conread position: 5-197
Cow position: chr25:26654780-26654971 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 151

Conread position: 5-197
Cow position: chr25:31230364-31230178 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 60, 74

Conread position: 5-197
Cow position: chr25:35612432-35612249 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 80, 53

Conread position: 5-199
Cow position: chr25:12755621-12755413 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 5-199
Cow position: chr25:35347779-35347969 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 150
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 59, 97

Conread position: 5-200
Cow position: chr25:12081451-12081255 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 137
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 17, 99

Conread position: 5-202
Cow position: chr25:15377199-15377395 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 150
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 80, 43

Conread position: 5-235
Cow position: chr25:36036909-36036677 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 5-236
Cow position: chr25:4547845-4547615 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 66, 84

Conread position: 5-239
Cow position: chr25:11436935-11436701 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 180
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 60, 30

Conread position: 5-239
Cow position: chr25:12778657-12778435 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 160
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 5-243
Cow position: chr25:27531401-27531160 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 163
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 90, 128

Conread position: 5-244
Cow position: chr25:4681108-4681337 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 173
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 93, 55

Conread position: 5-244
Cow position: chr25:13387678-13387919 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 159
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 101, 53

Conread position: 5-248
Cow position: chr25:14157493-14157740 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 188
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 59, 24

Conread position: 5-248
Cow position: chr25:34978996-34978749 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 169
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 81, 220

Conread position: 5-249
Cow position: chr25:8961645-8961886 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 169
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 81, 54

Conread position: 5-250
Cow position: chr25:24572940-24573184 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 171
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 232, 160

Conread position: 5-255
Cow position: chr25:7641579-7641328 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 184
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 81, 53

Conread position: 5-255
Cow position: chr25:12117117-12116877 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 171
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 98, 54

Conread position: 5-255
Cow position: chr25:12510138-12509890 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 44

Conread position: 5-257
Cow position: chr25:21191362-21191610 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 35

Conread position: 5-257
Cow position: chr25:22178792-22179040 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 182
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 69, 89

Conread position: 5-257
Cow position: chr25:26700908-26701149 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 171
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 5-257
Cow position: chr25:36081748-36081998 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 173
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 59, 97

Conread position: 5-258
Cow position: chr25:7216702-7216949 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 181
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 60, 48

Conread position: 5-258
Cow position: chr25:38957846-38958082 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 179
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 196, 38

Conread position: 5-261
Cow position: chr25:7750327-7750580 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 181
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 93, 53

Conread position: 5-261
Cow position: chr25:22346644-22346911 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 179
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 5-262
Cow position: chr25:3992665-3992910 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 178
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 101, 35

Conread position: 5-262
Cow position: chr25:5474355-5474103 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 178
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 10, 80

Conread position: 5-262
Cow position: chr25:19679217-19679482 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 191
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 60, 29

Conread position: 5-262
Cow position: chr25:22315074-22315334 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 182
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 88, 70

Conread position: 5-262
Cow position: chr25:23779454-23779203 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 175
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 10, 89

Conread position: 5-262
Cow position: chr25:33550380-33550641 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 191
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 52, 26

Conread position: 5-263
Cow position: chr25:10218179-10217921 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 181
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 10, 89

Conread position: 5-264
Cow position: chr25:17566456-17566720 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 181
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 15, 107

Conread position: 5-265
Cow position: chr25:1838108-1838372 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 182
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 16, 97

Conread position: 5-265
Cow position: chr25:13272444-13272700 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 189
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 62, 25

Conread position: 5-265
Cow position: chr25:19129724-19129985 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 188
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 62, 209

Conread position: 5-265
Cow position: chr25:21193069-21192810 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 199
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 34, 141

Conread position: 5-266
Cow position: chr25:6474224-6473956 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 188
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 60, 19

Conread position: 5-266
Cow position: chr25:26238742-26238994 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 182
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 153, 59

Conread position: 5-266
Cow position: chr25:33686808-33686552 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 189
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 60, 14

Conread position: 5-267
Cow position: chr25:26679099-26679358 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 94

Conread position: 5-268
Cow position: chr25:26523836-26524092 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 175
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 64, 79

Conread position: 5-269
Cow position: chr25:6683191-6682925 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 192
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 103, 0

Conread position: 5-271
Cow position: chr25:448296-448028 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 186
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 11, 98

Conread position: 5-272
Cow position: chr25:12319476-12319216 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 189
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 62, 171

Conread position: 5-273
Cow position: chr25:9002546-9002805 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 186
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 17, 82

Conread position: 5-273
Cow position: chr25:33256239-33256492 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 185
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 20, 47

Conread position: 5-274
Cow position: chr25:38135618-38135887 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 180
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 62, 206

Conread position: 5-275
Cow position: chr25:30618937-30619205 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 185
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 54, 14

Conread position: 5-277
Cow position: chr25:61528-61792 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 188
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 15, 94

Conread position: 5-277
Cow position: chr25:11585393-11585660 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 189
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 60, 17

Conread position: 5-277
Cow position: chr25:30279333-30279063 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 197
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 93, 53

Conread position: 5-280
Cow position: chr25:7007786-7008058 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 194
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 100, 53

Conread position: 5-281
Cow position: chr25:7581553-7581281 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 188
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 62, 97

Conread position: 5-281
Cow position: chr25:17144295-17144584 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 198
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 57, 162

Conread position: 5-287
Cow position: chr25:23917714-23917995 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 197
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 22, 78

Conread position: 5-301
Cow position: chr25:36761977-36762273 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 197
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 20, 110

Conread position: 5-304
Cow position: chr25:14196731-14197028 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 201
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 59, 216

Conread position: 5-368
Cow position: chr25:36017409-36017764 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 254
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 60, 77

Conread position: 5-372
Cow position: chr25:13672263-13672629 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 238
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 18, 180

Conread position: 5-372
Cow position: chr25:18905756-18906108 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 247
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 20, 102

Conread position: 5-372
Cow position: chr25:21895015-21894639 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 250
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 61, 183

Conread position: 6-169
Cow position: chr25:20211206-20211044 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 66, 16

Conread position: 6-237
Cow position: chr25:26089942-26089709 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 168
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 81, 124

Conread position: 6-238
Cow position: chr25:6961282-6961048 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 170
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 59, 85

Conread position: 6-238
Cow position: chr25:25051509-25051272 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 166
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 29, 0

Conread position: 6-244
Cow position: chr25:20076365-20076608 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 164
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 61, 204

Conread position: 6-255
Cow position: chr25:14512983-14513237 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 173
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 58, 196

Conread position: 6-257
Cow position: chr25:20023517-20023262 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 179
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 60, 0

Conread position: 6-258
Cow position: chr25:17190868-17190624 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 183
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 58, 24

Conread position: 6-258
Cow position: chr25:41151088-41150840 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 181
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 59, 51

Conread position: 6-265
Cow position: chr25:788137-788388 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 176
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 78, 99

Conread position: 6-267
Cow position: chr25:2624681-2624925 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 193
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 97, 0

Conread position: 6-269
Cow position: chr25:13380740-13380467 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 194
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 10, 99

Conread position: 6-270
Cow position: chr25:23053431-23053693 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 176
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 76

Conread position: 6-275
Cow position: chr25:9990220-9989973 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 193
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 51, 0

Conread position: 6-280
Cow position: chr25:22751137-22750863 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 190
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 59, 106

Conread position: 6-290
Cow position: chr25:7380967-7380684 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 189
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 19, 54

Conread position: 7-131
Cow position: chr25:12899630-12899757 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 7-261
Cow position: chr25:4488793-4489036 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 180
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 84, 62

Conread position: 8-231
Cow position: chr25:5920812-5921041 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 158
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 12, 219

Conread position: 8-254
Cow position: chr25:33457604-33457853 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 179
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 57, 0

Conread position: 8-262
Cow position: chr25:20785711-20785462 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 194
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 61, 89

Conread position: 8-262
Cow position: chr25:24669562-24669322 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 186
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 61, 94

Conread position: 8-263
Cow position: chr25:6464160-6463897 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 175
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 12, 182

Conread position: 9-238
Cow position: chr25:8120656-8120885 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 55, 71

Conread position: 9-240
Cow position: chr25:11051405-11051636 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 174
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 58, 26

Conread position: 9-277
Cow position: chr25:9843052-9843320 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 5

Conread position: 9-285
Cow position: chr25:34169829-34170097 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 202
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 100, 52

Conread position: 10-290
Cow position: chr25:22531161-22531435 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 49

Conread position: 13-193
Cow position: chr25:26642462-26642647 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 144
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 21, 0

Conread position: 13-267
Cow position: chr25:33557153-33557397 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 176
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 44, 106

Conread position: 14-189
Cow position: chr25:24504617-24504445 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 72, 90

Conread position: 14-211
Cow position: chr25:16714387-16714192 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 73, 56

Conread position: 14-245
Cow position: chr25:12840842-12840606 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 162
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 53, 110

Conread position: 14-258
Cow position: chr25:13569290-13569051 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 166
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 50, 97

Conread position: 14-261
Cow position: chr25:30319563-30319325 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 171
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 51, 88

Conread position: 14-267
Cow position: chr25:19364181-19363929 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 95

Conread position: 14-270
Cow position: chr25:36872242-36872495 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 188
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 55, 77

Conread position: 15-265
Cow position: chr25:11433072-11432815 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 231

Conread position: 18-180
Cow position: chr25:13139704-13139871 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 47, 138

Conread position: 23-230
Cow position: chr25:14809177-14809370 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 24-197
Cow position: chr25:30816776-30816953 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 24-199
Cow position: chr25:38425252-38425427 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 90

Conread position: 24-250
Cow position: chr25:6226937-6227154 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 157
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 205, 20

Conread position: 24-262
Cow position: chr25:28188056-28187816 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 168
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 41, 85

Conread position: 24-266
Cow position: chr25:17342346-17342591 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 164
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 41, 199

Conread position: 24-270
Cow position: chr25:1824205-1823961 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 162
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 81, 0

Conread position: 24-273
Cow position: chr25:25861467-25861213 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 173
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 41, 185

Conread position: 25-215
Cow position: chr25:14117984-14118173 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 42, 147

Conread position: 26-267
Cow position: chr25:5846917-5846674 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 167
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 5, 86

Conread position: 26-276
Cow position: chr25:21245711-21245465 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 178
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 39, 83

Conread position: 26-372
Cow position: chr25:22341418-22341752 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 232
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 15, 70

Conread position: 27-271
Cow position: chr25:36555796-36555550 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 168
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 37, 91

Conread position: 28-239
Cow position: chr25:10156474-10156675 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 177, 23

Conread position: 28-269
Cow position: chr25:13443519-13443276 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 169
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 39, 103

Conread position: 29-267
Cow position: chr25:23829233-23828999 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 164
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 67, 99

Conread position: 35-269
Cow position: chr25:7673191-7673437 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 168
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 11, 15

Conread position: 36-267
Cow position: chr25:23245100-23244873 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 171
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 26, 65

Conread position: 36-279
Cow position: chr25:10949682-10949433 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 170
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 23, 136

Conread position: 36-287
Cow position: chr25:34242195-34241949 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 177
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 30, 54

Conread position: 36-288
Cow position: chr25:23745165-23745410 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 182
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 59, 22

Conread position: 39-257
Cow position: chr25:16319234-16319014 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 164
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 55, 33

Conread position: 42-294
Cow position: chr25:4947871-4948124 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 180
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 17, 39

Conread position: 43-154
Cow position: chr25:35902422-35902536 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 47-211
Cow position: chr25:23817935-23817762 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 47-271
Cow position: chr25:7799466-7799685 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 18, 57

Conread position: 47-296
Cow position: chr25:26051814-26052064 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 171
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 20, 175

Conread position: 48-269
Cow position: chr25:12806958-12807174 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 151
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 19, 55

Conread position: 48-281
Cow position: chr25:13621445-13621210 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 175
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 18, 48

Conread position: 49-260
Cow position: chr25:15714788-15715000 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 18, 31

Conread position: 49-372
Cow position: chr25:7012345-7012658 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 232
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 7, 16

Conread position: 51-267
Cow position: chr25:26306285-26306072 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 47, 24

Conread position: 53-372
Cow position: chr25:40931194-40931511 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 223
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 12, 31

Conread position: 55-250
Cow position: chr25:6134168-6133974 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 134
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 41, 10

Conread position: 55-297
Cow position: chr25:22298561-22298791 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 168
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 7, 0

Conread position: 58-230
Cow position: chr25:13767895-13768067 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 54, 135

Conread position: 63-245
Cow position: chr25:7379219-7379035 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 45, 15

Conread position: 63-271
Cow position: chr25:23504978-23505188 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 159
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 24, 173

Conread position: 63-372
Cow position: chr25:22261367-22261092 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 214
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 70-262
Cow position: chr25:1840259-1840451 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 26, 174

Conread position: 71-262
Cow position: chr25:15273612-15273802 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 33, 0

Conread position: 72-279
Cow position: chr25:19478613-19478821 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 20, 0

Conread position: 74-372
Cow position: chr25:36019726-36019447 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 209
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 35, 102

Conread position: 88-255
Cow position: chr25:18810297-18810467 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 10, 0

Conread position: 89-269
Cow position: chr25:22348507-22348327 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 126
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 90-260
Cow position: chr25:35339232-35339062 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 94, 13

Conread position: 90-271
Cow position: chr25:28597655-28597472 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 68, 0

Conread position: 96-275
Cow position: chr25:35109306-35109126 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 125
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 175, 0

Conread position: 104-229
Cow position: chr25:37606332-37606457 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 107-257
Cow position: chr25:9107550-9107399 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 133, 0

Conread position: 107-262
Cow position: chr25:18288794-18288640 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 107-365
Cow position: chr25:26160939-26161189 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 179
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 66, 139

Conread position: 108-260
Cow position: chr25:13222875-13223026 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 134, 0

Conread position: 108-276
Cow position: chr25:15463562-15463730 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 119
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 109-244
Cow position: chr25:40740061-40740197 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 21, 65

Conread position: 116-273
Cow position: chr25:3744762-3744606 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 126, 0

Conread position: 116-281
Cow position: chr25:30625100-30624935 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 129-245
Cow position: chr25:23998928-23998812 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 90
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 133-372
Cow position: chr25:8222909-8223146 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 176
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 167, 37

Conread position: 134-265
Cow position: chr25:1802608-1802742 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 15, 121

Conread position: 140-372
Cow position: chr25:7012673-7012919 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 177
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 70, 0

Conread position: 171-372
Cow position: chr25:12899765-12899958 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 83, 0

Conread position: 183-340
Cow position: chr25:16316204-16316051 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 59, 0

Show alignments to all cow chromosomes.