Cow genome map

Conread name: Ss1.1-rpigcf0_016288.5

Conread position: 1-165
Cow position:
Alignm length: 166
Alignm identity: 127
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 98, 81

Conread position: 1-238
Cow position:
Alignm length: 239
Alignm identity: 161
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 76, 57

Conread position: 1-260
Cow position:
Alignm length: 265
Alignm identity: 197
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 96, 105

Conread position: 1-261
Cow position:
Alignm length: 261
Alignm identity: 191
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 42, 0

Conread position: 1-264
Cow position:
Alignm length: 266
Alignm identity: 190
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 56, 239

Conread position: 1-264
Cow position:
Alignm length: 265
Alignm identity: 185
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 199, 57

Conread position: 1-285
Cow position:
Alignm length: 299
Alignm identity: 198
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 15, 79

Conread position: 1-287
Cow position:
Alignm length: 294
Alignm identity: 197
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 19, 217

Conread position: 5-143
Cow position:
Alignm length: 145
Alignm identity: 113
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 5-150
Cow position:
Alignm length: 146
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 66, 0

Conread position: 5-158
Cow position:
Alignm length: 163
Alignm identity: 121
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 59, 131

Conread position: 5-163
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 5-163
Cow position:
Alignm length: 163
Alignm identity: 123
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 59, 15

Conread position: 5-169
Cow position:
Alignm length: 171
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 5-176
Cow position:
Alignm length: 180
Alignm identity: 145
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 54, 0

Conread position: 5-197
Cow position:
Alignm length: 195
Alignm identity: 140
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 60, 25

Conread position: 5-197
Cow position:
Alignm length: 196
Alignm identity: 139
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 11, 100

Conread position: 5-197
Cow position:
Alignm length: 196
Alignm identity: 139
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 21, 105

Conread position: 5-197
Cow position:
Alignm length: 197
Alignm identity: 140
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 15, 106

Conread position: 5-199
Cow position:
Alignm length: 199
Alignm identity: 142
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 23, 98

Conread position: 5-206
Cow position:
Alignm length: 207
Alignm identity: 145
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 36

Conread position: 5-209
Cow position:
Alignm length: 208
Alignm identity: 161
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 60, 118

Conread position: 5-211
Cow position:
Alignm length: 216
Alignm identity: 150
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 59, 180

Conread position: 5-212
Cow position:
Alignm length: 209
Alignm identity: 148
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 124, 54

Conread position: 5-212
Cow position:
Alignm length: 209
Alignm identity: 143
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 134, 62

Conread position: 5-236
Cow position:
Alignm length: 236
Alignm identity: 165
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 67, 212

Conread position: 5-240
Cow position:
Alignm length: 238
Alignm identity: 175
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 87, 30

Conread position: 5-245
Cow position:
Alignm length: 243
Alignm identity: 175
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 52, 0

Conread position: 5-245
Cow position:
Alignm length: 248
Alignm identity: 172
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 16, 117

Conread position: 5-249
Cow position:
Alignm length: 252
Alignm identity: 174
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 21, 162

Conread position: 5-256
Cow position:
Alignm length: 256
Alignm identity: 174
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 119, 53

Conread position: 5-257
Cow position:
Alignm length: 255
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 24

Conread position: 5-261
Cow position:
Alignm length: 261
Alignm identity: 176
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 92, 0

Conread position: 5-261
Cow position:
Alignm length: 268
Alignm identity: 193
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 18, 248

Conread position: 5-262
Cow position:
Alignm length: 262
Alignm identity: 178
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 20, 94

Conread position: 5-262
Cow position:
Alignm length: 261
Alignm identity: 178
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 59, 92

Conread position: 5-262
Cow position:
Alignm length: 260
Alignm identity: 185
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 52, 34

Conread position: 5-262
Cow position:
Alignm length: 263
Alignm identity: 175
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 11, 102

Conread position: 5-262
Cow position:
Alignm length: 263
Alignm identity: 195
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 61, 230

Conread position: 5-262
Cow position:
Alignm length: 262
Alignm identity: 178
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 61, 199

Conread position: 5-262
Cow position:
Alignm length: 259
Alignm identity: 187
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 196, 44

Conread position: 5-262
Cow position:
Alignm length: 264
Alignm identity: 172
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 13, 117

Conread position: 5-262
Cow position:
Alignm length: 261
Alignm identity: 177
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 62, 104

Conread position: 5-262
Cow position:
Alignm length: 259
Alignm identity: 188
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 67, 46

Conread position: 5-264
Cow position:
Alignm length: 262
Alignm identity: 192
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 62, 102

Conread position: 5-265
Cow position:
Alignm length: 261
Alignm identity: 194
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 53, 0

Conread position: 5-265
Cow position:
Alignm length: 262
Alignm identity: 184
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 87, 46

Conread position: 5-265
Cow position:
Alignm length: 269
Alignm identity: 185
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 10, 109

Conread position: 5-267
Cow position:
Alignm length: 269
Alignm identity: 181
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 15, 201

Conread position: 5-269
Cow position:
Alignm length: 270
Alignm identity: 188
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 60, 97

Conread position: 5-270
Cow position:
Alignm length: 270
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 171

Conread position: 5-271
Cow position:
Alignm length: 277
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 42

Conread position: 5-274
Cow position:
Alignm length: 273
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 112

Conread position: 5-276
Cow position:
Alignm length: 273
Alignm identity: 181
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 60, 83

Conread position: 5-281
Cow position:
Alignm length: 279
Alignm identity: 188
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 80, 94

Conread position: 5-281
Cow position:
Alignm length: 280
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 167

Conread position: 5-281
Cow position:
Alignm length: 282
Alignm identity: 200
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 67, 118

Conread position: 5-282
Cow position:
Alignm length: 284
Alignm identity: 196
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 60, 144

Conread position: 5-288
Cow position:
Alignm length: 285
Alignm identity: 196
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 196, 54

Conread position: 5-295
Cow position:
Alignm length: 298
Alignm identity: 206
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 59, 176

Conread position: 5-295
Cow position:
Alignm length: 296
Alignm identity: 199
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 17, 103

Conread position: 5-302
Cow position:
Alignm length: 313
Alignm identity: 207
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 10, 106

Conread position: 5-305
Cow position:
Alignm length: 307
Alignm identity: 213
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 17, 80

Conread position: 5-368
Cow position:
Alignm length: 369
Alignm identity: 239
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 20, 102

Conread position: 6-236
Cow position:
Alignm length: 236
Alignm identity: 164
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 60, 127

Conread position: 6-240
Cow position:
Alignm length: 243
Alignm identity: 172
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 53, 26

Conread position: 6-257
Cow position:
Alignm length: 257
Alignm identity: 168
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 63, 90

Conread position: 6-258
Cow position:
Alignm length: 262
Alignm identity: 174
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 57, 24

Conread position: 6-279
Cow position:
Alignm length: 278
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 12

Conread position: 6-279
Cow position:
Alignm length: 283
Alignm identity: 203
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 59, 216

Conread position: 6-301
Cow position:
Alignm length: 302
Alignm identity: 211
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 10, 99

Conread position: 7-248
Cow position:
Alignm length: 245
Alignm identity: 166
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 57, 72

Conread position: 7-262
Cow position:
Alignm length: 257
Alignm identity: 189
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 91, 27

Conread position: 7-269
Cow position:
Alignm length: 268
Alignm identity: 185
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 13, 75

Conread position: 8-200
Cow position:
Alignm length: 196
Alignm identity: 138
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 7, 0

Conread position: 8-261
Cow position:
Alignm length: 255
Alignm identity: 171
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 165, 91

Conread position: 8-261
Cow position:
Alignm length: 255
Alignm identity: 175
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 46, 0

Conread position: 8-262
Cow position:
Alignm length: 259
Alignm identity: 187
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 56, 103

Conread position: 8-262
Cow position:
Alignm length: 258
Alignm identity: 178
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 59, 43

Conread position: 8-262
Cow position:
Alignm length: 265
Alignm identity: 198
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 84, 57

Conread position: 8-269
Cow position:
Alignm length: 267
Alignm identity: 194
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 59, 163

Conread position: 8-278
Cow position:
Alignm length: 276
Alignm identity: 196
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 66, 199

Conread position: 9-251
Cow position:
Alignm length: 248
Alignm identity: 166
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 56, 89

Conread position: 9-262
Cow position:
Alignm length: 265
Alignm identity: 182
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 55, 93

Conread position: 9-265
Cow position:
Alignm length: 261
Alignm identity: 187
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 92, 46

Conread position: 10-164
Cow position:
Alignm length: 157
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 99, 75

Conread position: 13-262
Cow position:
Alignm length: 252
Alignm identity: 175
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 51, 36

Conread position: 13-262
Cow position:
Alignm length: 259
Alignm identity: 174
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 54, 33

Conread position: 13-310
Cow position:
Alignm length: 304
Alignm identity: 200
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 53, 96

Conread position: 14-238
Cow position:
Alignm length: 228
Alignm identity: 164
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 69, 93

Conread position: 14-262
Cow position:
Alignm length: 254
Alignm identity: 165
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 50, 134

Conread position: 14-285
Cow position:
Alignm length: 275
Alignm identity: 186
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 55, 96

Conread position: 14-287
Cow position:
Alignm length: 277
Alignm identity: 191
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 245, 89

Conread position: 14-341
Cow position:
Alignm length: 335
Alignm identity: 218
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 51, 78

Conread position: 15-269
Cow position:
Alignm length: 260
Alignm identity: 180
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 10, 97

Conread position: 15-286
Cow position:
Alignm length: 274
Alignm identity: 179
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 63

Conread position: 16-212
Cow position:
Alignm length: 200
Alignm identity: 138
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 46, 7

Conread position: 18-265
Cow position:
Alignm length: 249
Alignm identity: 167
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 231, 23

Conread position: 18-266
Cow position:
Alignm length: 251
Alignm identity: 179
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 47, 75

Conread position: 23-212
Cow position:
Alignm length: 192
Alignm identity: 136
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 64, 47

Conread position: 23-238
Cow position:
Alignm length: 220
Alignm identity: 155
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 46, 78

Conread position: 24-198
Cow position:
Alignm length: 180
Alignm identity: 128
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 41, 102

Conread position: 24-198
Cow position:
Alignm length: 175
Alignm identity: 127
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 24-264
Cow position:
Alignm length: 241
Alignm identity: 177
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 218, 0

Conread position: 24-287
Cow position:
Alignm length: 274
Alignm identity: 187
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 40, 0

Conread position: 26-265
Cow position:
Alignm length: 248
Alignm identity: 172
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 41, 179

Conread position: 26-270
Cow position:
Alignm length: 249
Alignm identity: 165
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 39, 83

Conread position: 29-260
Cow position:
Alignm length: 234
Alignm identity: 171
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 36, 20

Conread position: 30-281
Cow position:
Alignm length: 260
Alignm identity: 188
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 7, 30

Conread position: 31-265
Cow position:
Alignm length: 239
Alignm identity: 180
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 38, 15

Conread position: 35-280
Cow position:
Alignm length: 248
Alignm identity: 177
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 30, 72

Conread position: 36-239
Cow position:
Alignm length: 206
Alignm identity: 142
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 25, 65

Conread position: 45-245
Cow position:
Alignm length: 202
Alignm identity: 146
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 5, 20

Conread position: 46-261
Cow position:
Alignm length: 219
Alignm identity: 152
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 18, 197

Conread position: 47-256
Cow position:
Alignm length: 216
Alignm identity: 150
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 55, 0

Conread position: 51-244
Cow position:
Alignm length: 196
Alignm identity: 140
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 16, 45

Conread position: 53-289
Cow position:
Alignm length: 240
Alignm identity: 164
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 14, 169

Conread position: 56-263
Cow position:
Alignm length: 209
Alignm identity: 144
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 58, 5

Conread position: 63-273
Cow position:
Alignm length: 214
Alignm identity: 151
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 11, 57

Conread position: 64-372
Cow position:
Alignm length: 313
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 8

Conread position: 71-245
Cow position:
Alignm length: 178
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 15, 136

Conread position: 72-262
Cow position:
Alignm length: 194
Alignm identity: 138
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 27, 0

Conread position: 84-372
Cow position:
Alignm length: 291
Alignm identity: 206
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 14, 165

Conread position: 89-273
Cow position:
Alignm length: 185
Alignm identity: 140
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 13, 0

Conread position: 90-298
Cow position:
Alignm length: 210
Alignm identity: 145
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 111, 177

Conread position: 95-265
Cow position:
Alignm length: 171
Alignm identity: 122
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 122, 0

Conread position: 95-276
Cow position:
Alignm length: 182
Alignm identity: 128
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 152, 0

Conread position: 101-286
Cow position:
Alignm length: 195
Alignm identity: 137
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 97, 0

Conread position: 107-235
Cow position:
Alignm length: 129
Alignm identity: 100
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 107-258
Cow position:
Alignm length: 153
Alignm identity: 121
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 133, 141

Conread position: 107-273
Cow position:
Alignm length: 167
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 107-290
Cow position:
Alignm length: 189
Alignm identity: 137
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 101, 179

Conread position: 108-262
Cow position:
Alignm length: 155
Alignm identity: 111
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 108-286
Cow position:
Alignm length: 179
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 109-285
Cow position:
Alignm length: 177
Alignm identity: 136
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 117-281
Cow position:
Alignm length: 166
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 53, 58

Conread position: 139-287
Cow position:
Alignm length: 149
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 140-266
Cow position:
Alignm length: 128
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 109, 0

Show alignments to all cow chromosomes.