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Cow genome map

           
Conread name:
           
Ss1.1-rpigcf0_016288.5
        

               
Conread position:
               
1-195
               

               
Cow position:
               
chr29:6337528-6337725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr29:22613294-22613549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
63, 217
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr29:4875025-4874755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
53, 216
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr29:1325309-1325566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
63, 13
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr29:10058668-10058408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
97, 68
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr29:17296999-17297270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
21, 223
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr29:29057049-29057308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
19, 59
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr29:17222280-17222549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
22, 109
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr29:32211188-32210924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 86
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr29:40299144-40298866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
18, 37
               

               
Conread position:
               
4-199
               

               
Cow position:
               
chr29:40166117-40166310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
95, 61
               

               
Conread position:
               
4-215
               

               
Cow position:
               
chr29:44682226-44682022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
63, 30
               

               
Conread position:
               
4-244
               

               
Cow position:
               
chr29:17607291-17607527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
63, 27
               

               
Conread position:
               
4-248
               

               
Cow position:
               
chr29:4002767-4003006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
91, 43
               

               
Conread position:
               
5-167
               

               
Cow position:
               
chr29:31594258-31594093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
5-171
               

               
Cow position:
               
chr29:1395468-1395635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
80, 141
               

               
Conread position:
               
5-177
               

               
Cow position:
               
chr29:10456687-10456518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
66, 89
               

               
Conread position:
               
5-180
               

               
Cow position:
               
chr29:11136019-11135849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
92, 53
               

               
Conread position:
               
5-190
               

               
Cow position:
               
chr29:17301401-17301591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
5-191
               

               
Cow position:
               
chr29:42849095-42849283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
62, 125
               

               
Conread position:
               
5-195
               

               
Cow position:
               
chr29:2055929-2056123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
5-195
               

               
Cow position:
               
chr29:35291962-35292155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
60, 43
               

               
Conread position:
               
5-196
               

               
Cow position:
               
chr29:5098888-5098703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
5-197
               

               
Cow position:
               
chr29:43328512-43328708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
5-198
               

               
Cow position:
               
chr29:9718897-9718707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
62, 41
               

               
Conread position:
               
5-198
               

               
Cow position:
               
chr29:24103673-24103476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
59, 74
               

               
Conread position:
               
5-199
               

               
Cow position:
               
chr29:463782-463588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
15, 52
               

               
Conread position:
               
5-199
               

               
Cow position:
               
chr29:2071702-2071505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
20, 106
               

               
Conread position:
               
5-199
               

               
Cow position:
               
chr29:31943752-31943932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
5-199
               

               
Cow position:
               
chr29:43009210-43009018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
60, 87
               

               
Conread position:
               
5-206
               

               
Cow position:
               
chr29:6925884-6926078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
59, 76
               

               
Conread position:
               
5-208
               

               
Cow position:
               
chr29:16309614-16309818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
57, 93
               

               
Conread position:
               
5-231
               

               
Cow position:
               
chr29:9455182-9454961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
15, 57
               

               
Conread position:
               
5-231
               

               
Cow position:
               
chr29:23984087-23983857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
5-232
               

               
Cow position:
               
chr29:4520207-4520435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
57, 161
               

               
Conread position:
               
5-235
               

               
Cow position:
               
chr29:27826398-27826622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
125, 57
               

               
Conread position:
               
5-239
               

               
Cow position:
               
chr29:17154639-17154884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
60, 174
               

               
Conread position:
               
5-239
               

               
Cow position:
               
chr29:22162381-22162143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
5-241
               

               
Cow position:
               
chr29:28446384-28446148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
59, 137
               

               
Conread position:
               
5-241
               

               
Cow position:
               
chr29:28868508-28868751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
5-243
               

               
Cow position:
               
chr29:28197132-28196899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
111, 13
               

               
Conread position:
               
5-244
               

               
Cow position:
               
chr29:29176743-29176506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
59, 100
               

               
Conread position:
               
5-244
               

               
Cow position:
               
chr29:39567559-39567792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
60, 97
               

               
Conread position:
               
5-250
               

               
Cow position:
               
chr29:11053988-11053743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
10, 72
               

               
Conread position:
               
5-251
               

               
Cow position:
               
chr29:9912044-9912294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
60, 218
               

               
Conread position:
               
5-253
               

               
Cow position:
               
chr29:28195642-28195401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
8, 94
               

               
Conread position:
               
5-257
               

               
Cow position:
               
chr29:39111443-39111192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
60, 85
               

               
Conread position:
               
5-259
               

               
Cow position:
               
chr29:36216989-36217236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
5-260
               

               
Cow position:
               
chr29:19762148-19762395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
5-261
               

               
Cow position:
               
chr29:9709568-9709824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
60, 24
               

               
Conread position:
               
5-261
               

               
Cow position:
               
chr29:28166341-28166094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
80, 96
               

               
Conread position:
               
5-261
               

               
Cow position:
               
chr29:34773862-34773609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
60, 94
               

               
Conread position:
               
5-262
               

               
Cow position:
               
chr29:11433994-11434248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
20, 96
               

               
Conread position:
               
5-262
               

               
Cow position:
               
chr29:35084351-35084091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
20, 83
               

               
Conread position:
               
5-263
               

               
Cow position:
               
chr29:3100386-3100134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
13, 85
               

               
Conread position:
               
5-263
               

               
Cow position:
               
chr29:35458903-35458641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
60, 18
               

               
Conread position:
               
5-264
               

               
Cow position:
               
chr29:4480300-4480042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 144
               

               
Conread position:
               
5-264
               

               
Cow position:
               
chr29:27588795-27589054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
96, 123
               

               
Conread position:
               
5-265
               

               
Cow position:
               
chr29:12025599-12025344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
20, 148
               

               
Conread position:
               
5-265
               

               
Cow position:
               
chr29:25091984-25092236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
59, 73
               

               
Conread position:
               
5-266
               

               
Cow position:
               
chr29:31674502-31674766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
90, 200
               

               
Conread position:
               
5-266
               

               
Cow position:
               
chr29:36530739-36530999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 96
               

               
Conread position:
               
5-267
               

               
Cow position:
               
chr29:1556804-1557061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
60, 34
               

               
Conread position:
               
5-267
               

               
Cow position:
               
chr29:12680030-12680290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
62, 91
               

               
Conread position:
               
5-267
               

               
Cow position:
               
chr29:31928853-31929119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
59, 96
               

               
Conread position:
               
5-268
               

               
Cow position:
               
chr29:25737546-25737282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
59, 96
               

               
Conread position:
               
5-269
               

               
Cow position:
               
chr29:5892720-5892981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
105, 60
               

               
Conread position:
               
5-269
               

               
Cow position:
               
chr29:40583665-40583921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
64, 102
               

               
Conread position:
               
5-271
               

               
Cow position:
               
chr29:34359108-34358843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 239
               

               
Conread position:
               
5-271
               

               
Cow position:
               
chr29:45005753-45005493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
88, 59
               

               
Conread position:
               
5-273
               

               
Cow position:
               
chr29:87146-86872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
21, 221
               

               
Conread position:
               
5-275
               

               
Cow position:
               
chr29:12784085-12783823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
20, 88
               

               
Conread position:
               
5-275
               

               
Cow position:
               
chr29:24952560-24952819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
61, 97
               

               
Conread position:
               
5-277
               

               
Cow position:
               
chr29:36210034-36210280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
127, 14
               

               
Conread position:
               
5-278
               

               
Cow position:
               
chr29:29314783-29314515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
60, 201
               

               
Conread position:
               
5-280
               

               
Cow position:
               
chr29:5186623-5186348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
55, 24
               

               
Conread position:
               
5-280
               

               
Cow position:
               
chr29:22714852-22714577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
60, 138
               

               
Conread position:
               
5-281
               

               
Cow position:
               
chr29:1022165-1022443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
12, 104
               

               
Conread position:
               
5-281
               

               
Cow position:
               
chr29:11398051-11397781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
60, 14
               

               
Conread position:
               
5-286
               

               
Cow position:
               
chr29:11562487-11562760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
101, 84
               

               
Conread position:
               
5-286
               

               
Cow position:
               
chr29:13372537-13372820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
60, 97
               

               
Conread position:
               
5-286
               

               
Cow position:
               
chr29:39329722-39329452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
5-287
               

               
Cow position:
               
chr29:4334599-4334876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
20, 95
               

               
Conread position:
               
5-287
               

               
Cow position:
               
chr29:23244008-23243726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 125
               

               
Conread position:
               
5-288
               

               
Cow position:
               
chr29:37618178-37618462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
80, 60
               

               
Conread position:
               
5-294
               

               
Cow position:
               
chr29:25333589-25333300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
85, 14
               

               
Conread position:
               
5-309
               

               
Cow position:
               
chr29:6293604-6293303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
9, 95
               

               
Conread position:
               
5-309
               

               
Cow position:
               
chr29:17109840-17110129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
61, 74
               

               
Conread position:
               
5-310
               

               
Cow position:
               
chr29:20903412-20903110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
93, 15
               

               
Conread position:
               
5-372
               

               
Cow position:
               
chr29:10156433-10156073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 147
               

               
Conread position:
               
5-372
               

               
Cow position:
               
chr29:24252110-24252460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
57, 102
               

               
Conread position:
               
6-161
               

               
Cow position:
               
chr29:39643048-39643204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
17, 107
               

               
Conread position:
               
6-201
               

               
Cow position:
               
chr29:22778305-22778108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
19, 167
               

               
Conread position:
               
6-228
               

               
Cow position:
               
chr29:29974917-29975131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
56, 20
               

               
Conread position:
               
6-230
               

               
Cow position:
               
chr29:732492-732714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
51, 12
               

               
Conread position:
               
6-233
               

               
Cow position:
               
chr29:10235256-10235034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
59, 24
               

               
Conread position:
               
6-244
               

               
Cow position:
               
chr29:26615849-26615605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
6-262
               

               
Cow position:
               
chr29:10838823-10839070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
58, 86
               

               
Conread position:
               
6-262
               

               
Cow position:
               
chr29:29769478-29769223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
59, 91
               

               
Conread position:
               
6-273
               

               
Cow position:
               
chr29:19338861-19339139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
58, 12
               

               
Conread position:
               
6-299
               

               
Cow position:
               
chr29:34745788-34745494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
58, 134
               

               
Conread position:
               
7-220
               

               
Cow position:
               
chr29:27329766-27329980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
60, 100
               

               
Conread position:
               
7-260
               

               
Cow position:
               
chr29:41811708-41811464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
8-196
               

               
Cow position:
               
chr29:29795513-29795319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
8-200
               

               
Cow position:
               
chr29:2744397-2744200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
8-290
               

               
Cow position:
               
chr29:16609616-16609904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
22, 137
               

               
Conread position:
               
8-290
               

               
Cow position:
               
chr29:35677675-35677387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
12, 218
               

               
Conread position:
               
9-245
               

               
Cow position:
               
chr29:35501775-35501543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
58, 76
               

               
Conread position:
               
9-262
               

               
Cow position:
               
chr29:24624126-24624378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
76, 51
               

               
Conread position:
               
9-287
               

               
Cow position:
               
chr29:22175563-22175829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
55, 83
               

               
Conread position:
               
10-245
               

               
Cow position:
               
chr29:22936145-22936383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
16, 147
               

               
Conread position:
               
10-274
               

               
Cow position:
               
chr29:13639493-13639227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
54, 69
               

               
Conread position:
               
11-250
               

               
Cow position:
               
chr29:40117446-40117688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
54, 184
               

               
Conread position:
               
11-261
               

               
Cow position:
               
chr29:16657568-16657823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
54, 195
               

               
Conread position:
               
11-288
               

               
Cow position:
               
chr29:26654159-26653891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
7, 53
               

               
Conread position:
               
14-199
               

               
Cow position:
               
chr29:27846350-27846530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
97, 51
               

               
Conread position:
               
14-230
               

               
Cow position:
               
chr29:2984769-2984987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
43, 169
               

               
Conread position:
               
14-239
               

               
Cow position:
               
chr29:12626098-12625870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
50, 166
               

               
Conread position:
               
14-265
               

               
Cow position:
               
chr29:23874343-23874592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
72, 24
               

               
Conread position:
               
14-269
               

               
Cow position:
               
chr29:22068865-22068609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
52, 193
               

               
Conread position:
               
14-275
               

               
Cow position:
               
chr29:32799827-32799571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
50, 121
               

               
Conread position:
               
14-277
               

               
Cow position:
               
chr29:13028319-13028582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
51, 21
               

               
Conread position:
               
14-289
               

               
Cow position:
               
chr29:750023-749751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
75, 35
               

               
Conread position:
               
15-197
               

               
Cow position:
               
chr29:17409217-17409399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
51, 94
               

               
Conread position:
               
15-268
               

               
Cow position:
               
chr29:26559358-26559111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
47, 26
               

               
Conread position:
               
16-262
               

               
Cow position:
               
chr29:5063031-5063274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
49, 19
               

               
Conread position:
               
16-267
               

               
Cow position:
               
chr29:41530730-41530983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
49, 188
               

               
Conread position:
               
18-238
               

               
Cow position:
               
chr29:26275497-26275711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
87, 52
               

               
Conread position:
               
19-279
               

               
Cow position:
               
chr29:8926577-8926315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
21-286
               

               
Cow position:
               
chr29:40959959-40959694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
51, 87
               

               
Conread position:
               
22-282
               

               
Cow position:
               
chr29:5046541-5046798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
44, 85
               

               
Conread position:
               
23-257
               

               
Cow position:
               
chr29:41112990-41112757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
17, 7
               

               
Conread position:
               
23-260
               

               
Cow position:
               
chr29:1614815-1615056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
48, 117
               

               
Conread position:
               
23-260
               

               
Cow position:
               
chr29:7624074-7624303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
24-196
               

               
Cow position:
               
chr29:21941490-21941664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
24-260
               

               
Cow position:
               
chr29:1007707-1007945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
40, 87
               

               
Conread position:
               
24-262
               

               
Cow position:
               
chr29:5409249-5409011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
42, 57
               

               
Conread position:
               
24-272
               

               
Cow position:
               
chr29:28775566-28775324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
25-262
               

               
Cow position:
               
chr29:19949198-19949436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
42, 14
               

               
Conread position:
               
26-244
               

               
Cow position:
               
chr29:8862585-8862369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
38, 80
               

               
Conread position:
               
26-291
               

               
Cow position:
               
chr29:32290501-32290764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
41, 81
               

               
Conread position:
               
26-305
               

               
Cow position:
               
chr29:23389663-23389393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
39, 141
               

               
Conread position:
               
27-258
               

               
Cow position:
               
chr29:26778774-26779007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
67, 148
               

               
Conread position:
               
30-235
               

               
Cow position:
               
chr29:24578755-24578965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
30-262
               

               
Cow position:
               
chr29:18085468-18085701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
37, 10
               

               
Conread position:
               
38-278
               

               
Cow position:
               
chr29:2263092-2262848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
29, 73
               

               
Conread position:
               
38-279
               

               
Cow position:
               
chr29:23155131-23155375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
11, 69
               

               
Conread position:
               
40-265
               

               
Cow position:
               
chr29:21665994-21666218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
26, 55
               

               
Conread position:
               
42-265
               

               
Cow position:
               
chr29:29923666-29923442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
14, 81
               

               
Conread position:
               
48-262
               

               
Cow position:
               
chr29:20770258-20770471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
17, 121
               

               
Conread position:
               
53-270
               

               
Cow position:
               
chr29:18012474-18012695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
53-278
               

               
Cow position:
               
chr29:22519210-22518983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
12, 221
               

               
Conread position:
               
60-262
               

               
Cow position:
               
chr29:23825292-23825081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
63-271
               

               
Cow position:
               
chr29:29324482-29324288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
63-279
               

               
Cow position:
               
chr29:23220570-23220356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
36, 139
               

               
Conread position:
               
64-204
               

               
Cow position:
               
chr29:31477184-31477041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
64-267
               

               
Cow position:
               
chr29:38978462-38978661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
30, 138
               

               
Conread position:
               
65-247
               

               
Cow position:
               
chr29:30548707-30548890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
65-259
               

               
Cow position:
               
chr29:32176613-32176796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
65-262
               

               
Cow position:
               
chr29:44139312-44139114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
43, 131
               

               
Conread position:
               
66-268
               

               
Cow position:
               
chr29:40873943-40874145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
39, 177
               

               
Conread position:
               
71-281
               

               
Cow position:
               
chr29:28840093-28840304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
25, 35
               

               
Conread position:
               
72-272
               

               
Cow position:
               
chr29:21285300-21285498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
74-271
               

               
Cow position:
               
chr29:30681769-30681573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
87-277
               

               
Cow position:
               
chr29:30918503-30918690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
184, 160
               

               
Conread position:
               
93-258
               

               
Cow position:
               
chr29:22735144-22734982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
147, 12
               

               
Conread position:
               
99-266
               

               
Cow position:
               
chr29:32197663-32197825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
110, 102
               

               
Conread position:
               
104-297
               

               
Cow position:
               
chr29:9310571-9310765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
75, 67
               

               
Conread position:
               
107-262
               

               
Cow position:
               
chr29:17804509-17804661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
108-260
               

               
Cow position:
               
chr29:22723576-22723726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
108-372
               

               
Cow position:
               
chr29:683515-683265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
59, 109
               

               
Conread position:
               
109-250
               

               
Cow position:
               
chr29:742673-742531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
110-262
               

               
Cow position:
               
chr29:7290753-7290903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
91, 97
               

               
Conread position:
               
113-265
               

               
Cow position:
               
chr29:39038289-39038137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
88, 92
               

               
Conread position:
               
113-287
               

               
Cow position:
               
chr29:11527809-11527640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
122-265
               

               
Cow position:
               
chr29:19363700-19363840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
127-275
               

               
Cow position:
               
chr29:19125316-19125462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
140-287
               

               
Cow position:
               
chr29:17022157-17022304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.