• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-rpigcf0_016288.5
        

               
Conread position:
               
1-209
               

               
Cow position:
               
chr5:67540308-67540095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
115, 69
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr5:42744683-42744904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
118, 66
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr5:74580691-74580928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
239, 45
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr5:45574510-45574772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr5:60016062-60016317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
66, 171
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr5:62378686-62378933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
63, 90
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr5:34976951-34976680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
14, 110
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr5:47601714-47601969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
63, 95
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr5:69337724-69337977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
38, 49
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr5:53946790-53947059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
59, 209
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr5:60599290-60599038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
18, 30
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr5:66581858-66582130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
18, 90
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr5:74015835-74016103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
68, 154
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr5:7697900-7698171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
63, 103
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr5:23678809-23678521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
25, 174
               

               
Conread position:
               
2-258
               

               
Cow position:
               
chr5:55068606-55068859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
13, 39
               

               
Conread position:
               
3-253
               

               
Cow position:
               
chr5:69731404-69731648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
82, 56
               

               
Conread position:
               
3-260
               

               
Cow position:
               
chr5:17768247-17767997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
66, 101
               

               
Conread position:
               
4-257
               

               
Cow position:
               
chr5:49474647-49474394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
63, 31
               

               
Conread position:
               
4-259
               

               
Cow position:
               
chr5:74643773-74643524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
60, 93
               

               
Conread position:
               
4-267
               

               
Cow position:
               
chr5:64139464-64139721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
61, 78
               

               
Conread position:
               
4-277
               

               
Cow position:
               
chr5:61810683-61810943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
5, 99
               

               
Conread position:
               
4-281
               

               
Cow position:
               
chr5:54311230-54311512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr5:41293978-41294262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
18, 110
               

               
Conread position:
               
5-140
               

               
Cow position:
               
chr5:62826855-62826717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
5-151
               

               
Cow position:
               
chr5:27015583-27015726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
5-153
               

               
Cow position:
               
chr5:6086659-6086512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
52, 98
               

               
Conread position:
               
5-153
               

               
Cow position:
               
chr5:55849844-55849696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 84
               

               
Conread position:
               
5-154
               

               
Cow position:
               
chr5:60126270-60126422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
5-161
               

               
Cow position:
               
chr5:3627254-3627096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
19, 103
               

               
Conread position:
               
5-168
               

               
Cow position:
               
chr5:21964184-21964352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
5-173
               

               
Cow position:
               
chr5:64823412-64823243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
94, 52
               

               
Conread position:
               
5-177
               

               
Cow position:
               
chr5:56820363-56820189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
59, 139
               

               
Conread position:
               
5-178
               

               
Cow position:
               
chr5:27154922-27155089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
35, 13
               

               
Conread position:
               
5-179
               

               
Cow position:
               
chr5:6670295-6670119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
60, 48
               

               
Conread position:
               
5-185
               

               
Cow position:
               
chr5:50799439-50799614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
103, 60
               

               
Conread position:
               
5-188
               

               
Cow position:
               
chr5:34638783-34638967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
60, 104
               

               
Conread position:
               
5-190
               

               
Cow position:
               
chr5:31144888-31144702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
57, 13
               

               
Conread position:
               
5-190
               

               
Cow position:
               
chr5:46122451-46122268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
59, 104
               

               
Conread position:
               
5-195
               

               
Cow position:
               
chr5:8024296-8024110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
5-196
               

               
Cow position:
               
chr5:41713201-41713387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
59, 42
               

               
Conread position:
               
5-197
               

               
Cow position:
               
chr5:31481045-31481240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
18, 50
               

               
Conread position:
               
5-197
               

               
Cow position:
               
chr5:45273602-45273409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
20, 87
               

               
Conread position:
               
5-197
               

               
Cow position:
               
chr5:63865694-63865887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
64, 161
               

               
Conread position:
               
5-198
               

               
Cow position:
               
chr5:6891119-6890927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
59, 146
               

               
Conread position:
               
5-199
               

               
Cow position:
               
chr5:14629914-14629716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
5-199
               

               
Cow position:
               
chr5:16508994-16509200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
5-199
               

               
Cow position:
               
chr5:52645180-52644986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
62, 110
               

               
Conread position:
               
5-199
               

               
Cow position:
               
chr5:60747379-60747186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
59, 93
               

               
Conread position:
               
5-199
               

               
Cow position:
               
chr5:65588602-65588793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
78, 135
               

               
Conread position:
               
5-199
               

               
Cow position:
               
chr5:69520792-69520985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
90, 75
               

               
Conread position:
               
5-202
               

               
Cow position:
               
chr5:19278801-19278609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
59, 98
               

               
Conread position:
               
5-209
               

               
Cow position:
               
chr5:40039871-40039662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
59, 147
               

               
Conread position:
               
5-209
               

               
Cow position:
               
chr5:46425952-46425751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
87, 59
               

               
Conread position:
               
5-212
               

               
Cow position:
               
chr5:62638806-62639011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
61, 104
               

               
Conread position:
               
5-213
               

               
Cow position:
               
chr5:56635799-56636003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
20, 98
               

               
Conread position:
               
5-215
               

               
Cow position:
               
chr5:35763174-35763372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
59, 98
               

               
Conread position:
               
5-218
               

               
Cow position:
               
chr5:29212843-29213052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
71, 101
               

               
Conread position:
               
5-224
               

               
Cow position:
               
chr5:20407768-20407559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
94, 54
               

               
Conread position:
               
5-230
               

               
Cow position:
               
chr5:48009950-48009734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
54, 95
               

               
Conread position:
               
5-232
               

               
Cow position:
               
chr5:24349006-24349233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
12, 105
               

               
Conread position:
               
5-235
               

               
Cow position:
               
chr5:15598334-15598108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
107, 62
               

               
Conread position:
               
5-235
               

               
Cow position:
               
chr5:57935210-57934978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
5-236
               

               
Cow position:
               
chr5:4218773-4218988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
82, 34
               

               
Conread position:
               
5-236
               

               
Cow position:
               
chr5:8821109-8820882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
89, 30
               

               
Conread position:
               
5-236
               

               
Cow position:
               
chr5:64758873-64758636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
5-237
               

               
Cow position:
               
chr5:42670957-42670732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
149, 34
               

               
Conread position:
               
5-238
               

               
Cow position:
               
chr5:20783523-20783755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
93, 63
               

               
Conread position:
               
5-238
               

               
Cow position:
               
chr5:67243828-67244051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
89, 44
               

               
Conread position:
               
5-239
               

               
Cow position:
               
chr5:7044808-7044571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
5-239
               

               
Cow position:
               
chr5:15722167-15721940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
60, 86
               

               
Conread position:
               
5-239
               

               
Cow position:
               
chr5:74003731-74003501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
20, 54
               

               
Conread position:
               
5-243
               

               
Cow position:
               
chr5:20422285-20422055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
5-244
               

               
Cow position:
               
chr5:7193330-7193555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
99, 18
               

               
Conread position:
               
5-244
               

               
Cow position:
               
chr5:15363793-15364021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
93, 50
               

               
Conread position:
               
5-245
               

               
Cow position:
               
chr5:35826502-35826741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
54, 93
               

               
Conread position:
               
5-245
               

               
Cow position:
               
chr5:56524074-56524314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
92, 62
               

               
Conread position:
               
5-247
               

               
Cow position:
               
chr5:34463686-34463439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
17, 204
               

               
Conread position:
               
5-248
               

               
Cow position:
               
chr5:54375608-54375360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
60, 103
               

               
Conread position:
               
5-248
               

               
Cow position:
               
chr5:60183700-60183948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
5-249
               

               
Cow position:
               
chr5:16214584-16214831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
62, 21
               

               
Conread position:
               
5-253
               

               
Cow position:
               
chr5:5257393-5257140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
60, 7
               

               
Conread position:
               
5-255
               

               
Cow position:
               
chr5:25035344-25035110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
56, 94
               

               
Conread position:
               
5-255
               

               
Cow position:
               
chr5:44446969-44446715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
5-256
               

               
Cow position:
               
chr5:28224351-28224601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
16, 99
               

               
Conread position:
               
5-257
               

               
Cow position:
               
chr5:26990291-26990540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
59, 138
               

               
Conread position:
               
5-257
               

               
Cow position:
               
chr5:39258420-39258656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
10, 38
               

               
Conread position:
               
5-257
               

               
Cow position:
               
chr5:40109398-40109644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 30
               

               
Conread position:
               
5-257
               

               
Cow position:
               
chr5:62172315-62172564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
61, 46
               

               
Conread position:
               
5-258
               

               
Cow position:
               
chr5:25231105-25230866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
96, 60
               

               
Conread position:
               
5-258
               

               
Cow position:
               
chr5:42050450-42050706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
69, 125
               

               
Conread position:
               
5-258
               

               
Cow position:
               
chr5:50943251-50943003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
40, 72
               

               
Conread position:
               
5-258
               

               
Cow position:
               
chr5:56014633-56014881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
93, 44
               

               
Conread position:
               
5-259
               

               
Cow position:
               
chr5:56877387-56877634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
60, 24
               

               
Conread position:
               
5-260
               

               
Cow position:
               
chr5:57074435-57074175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
5-261
               

               
Cow position:
               
chr5:18289028-18289278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
20, 136
               

               
Conread position:
               
5-261
               

               
Cow position:
               
chr5:41164985-41165242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
59, 238
               

               
Conread position:
               
5-261
               

               
Cow position:
               
chr5:55176789-55177039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
60, 134
               

               
Conread position:
               
5-261
               

               
Cow position:
               
chr5:56028628-56028387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
57, 95
               

               
Conread position:
               
5-261
               

               
Cow position:
               
chr5:66257538-66257792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
60, 30
               

               
Conread position:
               
5-261
               

               
Cow position:
               
chr5:70951977-70951734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
62, 97
               

               
Conread position:
               
5-262
               

               
Cow position:
               
chr5:12673563-12673321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
245, 53
               

               
Conread position:
               
5-262
               

               
Cow position:
               
chr5:17087126-17086863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
34, 74
               

               
Conread position:
               
5-262
               

               
Cow position:
               
chr5:30276596-30276845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
60, 86
               

               
Conread position:
               
5-262
               

               
Cow position:
               
chr5:30302792-30303048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
59, 115
               

               
Conread position:
               
5-262
               

               
Cow position:
               
chr5:33560835-33560579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
13, 105
               

               
Conread position:
               
5-262
               

               
Cow position:
               
chr5:38833022-38833277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
90, 145
               

               
Conread position:
               
5-262
               

               
Cow position:
               
chr5:45397477-45397726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
5-262
               

               
Cow position:
               
chr5:55955808-55956069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
60, 8
               

               
Conread position:
               
5-263
               

               
Cow position:
               
chr5:14314424-14314684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
60, 247
               

               
Conread position:
               
5-263
               

               
Cow position:
               
chr5:55232896-55232659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
216, 37
               

               
Conread position:
               
5-264
               

               
Cow position:
               
chr5:50533488-50533229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
54, 159
               

               
Conread position:
               
5-264
               

               
Cow position:
               
chr5:61725872-61726118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
19, 6
               

               
Conread position:
               
5-265
               

               
Cow position:
               
chr5:7755663-7755406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
64, 87
               

               
Conread position:
               
5-265
               

               
Cow position:
               
chr5:22666992-22667230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
92, 48
               

               
Conread position:
               
5-265
               

               
Cow position:
               
chr5:26467522-26467788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
63, 204
               

               
Conread position:
               
5-265
               

               
Cow position:
               
chr5:35684837-35685095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
59, 43
               

               
Conread position:
               
5-265
               

               
Cow position:
               
chr5:63647576-63647317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
11, 102
               

               
Conread position:
               
5-265
               

               
Cow position:
               
chr5:64523968-64523704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
60, 76
               

               
Conread position:
               
5-265
               

               
Cow position:
               
chr5:65752755-65753019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
20, 248
               

               
Conread position:
               
5-265
               

               
Cow position:
               
chr5:65941351-65941091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
93, 228
               

               
Conread position:
               
5-265
               

               
Cow position:
               
chr5:65967829-65967573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
96, 58
               

               
Conread position:
               
5-265
               

               
Cow position:
               
chr5:72895587-72895846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
5-266
               

               
Cow position:
               
chr5:43371299-43371034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
15, 107
               

               
Conread position:
               
5-266
               

               
Cow position:
               
chr5:55966980-55966724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
62, 98
               

               
Conread position:
               
5-267
               

               
Cow position:
               
chr5:991365-991634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
60, 92
               

               
Conread position:
               
5-267
               

               
Cow position:
               
chr5:9894230-9893964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 110
               

               
Conread position:
               
5-267
               

               
Cow position:
               
chr5:12557393-12557127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
60, 185
               

               
Conread position:
               
5-267
               

               
Cow position:
               
chr5:14550683-14550422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
18, 98
               

               
Conread position:
               
5-267
               

               
Cow position:
               
chr5:16206256-16205993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
59, 146
               

               
Conread position:
               
5-267
               

               
Cow position:
               
chr5:24996324-24996059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
60, 105
               

               
Conread position:
               
5-267
               

               
Cow position:
               
chr5:41010094-41009850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
80, 45
               

               
Conread position:
               
5-267
               

               
Cow position:
               
chr5:44028402-44028145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
34, 55
               

               
Conread position:
               
5-267
               

               
Cow position:
               
chr5:46512864-46512606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 92
               

               
Conread position:
               
5-267
               

               
Cow position:
               
chr5:55942497-55942217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
5-267
               

               
Cow position:
               
chr5:69461233-69461495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
90, 64
               

               
Conread position:
               
5-267
               

               
Cow position:
               
chr5:71494716-71494983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
11, 201
               

               
Conread position:
               
5-268
               

               
Cow position:
               
chr5:23168926-23168665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 30
               

               
Conread position:
               
5-268
               

               
Cow position:
               
chr5:36039105-36038841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
87, 165
               

               
Conread position:
               
5-268
               

               
Cow position:
               
chr5:52165280-52165018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
22, 180
               

               
Conread position:
               
5-269
               

               
Cow position:
               
chr5:11540149-11539892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
20, 100
               

               
Conread position:
               
5-269
               

               
Cow position:
               
chr5:12901814-12902079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
17, 133
               

               
Conread position:
               
5-269
               

               
Cow position:
               
chr5:20127954-20128214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
20, 85
               

               
Conread position:
               
5-269
               

               
Cow position:
               
chr5:30629259-30628993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 101
               

               
Conread position:
               
5-269
               

               
Cow position:
               
chr5:37814522-37814789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
69, 24
               

               
Conread position:
               
5-269
               

               
Cow position:
               
chr5:58490616-58490895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
17, 220
               

               
Conread position:
               
5-270
               

               
Cow position:
               
chr5:64592195-64591930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
5-271
               

               
Cow position:
               
chr5:14921031-14920761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
93, 126
               

               
Conread position:
               
5-272
               

               
Cow position:
               
chr5:53835613-53835880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
64, 13
               

               
Conread position:
               
5-273
               

               
Cow position:
               
chr5:25495452-25495190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
47, 98
               

               
Conread position:
               
5-273
               

               
Cow position:
               
chr5:35969441-35969700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
5-273
               

               
Cow position:
               
chr5:65776483-65776216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
59, 84
               

               
Conread position:
               
5-274
               

               
Cow position:
               
chr5:32339065-32338799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
152, 118
               

               
Conread position:
               
5-274
               

               
Cow position:
               
chr5:34887296-34887030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
11, 61
               

               
Conread position:
               
5-275
               

               
Cow position:
               
chr5:5111176-5110899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 106
               

               
Conread position:
               
5-275
               

               
Cow position:
               
chr5:43457617-43457363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
59, 37
               

               
Conread position:
               
5-277
               

               
Cow position:
               
chr5:39447631-39447365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
98, 46
               

               
Conread position:
               
5-278
               

               
Cow position:
               
chr5:9090121-9089855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
62, 98
               

               
Conread position:
               
5-278
               

               
Cow position:
               
chr5:21040077-21039813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
10, 80
               

               
Conread position:
               
5-278
               

               
Cow position:
               
chr5:46509967-46509693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
64, 26
               

               
Conread position:
               
5-282
               

               
Cow position:
               
chr5:64321652-64321924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
64, 24
               

               
Conread position:
               
5-284
               

               
Cow position:
               
chr5:4032095-4031809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
17, 251
               

               
Conread position:
               
5-284
               

               
Cow position:
               
chr5:44752412-44752134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
82, 60
               

               
Conread position:
               
5-285
               

               
Cow position:
               
chr5:4220883-4221159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
61, 87
               

               
Conread position:
               
5-286
               

               
Cow position:
               
chr5:49440973-49440697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
93, 218
               

               
Conread position:
               
5-287
               

               
Cow position:
               
chr5:51151460-51151172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
10, 64
               

               
Conread position:
               
5-287
               

               
Cow position:
               
chr5:57737009-57737281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
5-287
               

               
Cow position:
               
chr5:58446702-58446988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
54, 242
               

               
Conread position:
               
5-289
               

               
Cow position:
               
chr5:50821681-50821969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 97
               

               
Conread position:
               
5-290
               

               
Cow position:
               
chr5:2309661-2309376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
14, 98
               

               
Conread position:
               
5-290
               

               
Cow position:
               
chr5:26477113-26476833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
91, 58
               

               
Conread position:
               
5-290
               

               
Cow position:
               
chr5:36868638-36868919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
20, 47
               

               
Conread position:
               
5-292
               

               
Cow position:
               
chr5:57575668-57575962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
54, 219
               

               
Conread position:
               
5-293
               

               
Cow position:
               
chr5:44726427-44726151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
64, 94
               

               
Conread position:
               
5-296
               

               
Cow position:
               
chr5:44994139-44993858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
80, 59
               

               
Conread position:
               
5-302
               

               
Cow position:
               
chr5:21828765-21829064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 193
               

               
Conread position:
               
5-304
               

               
Cow position:
               
chr5:54060175-54060475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 157
               

               
Conread position:
               
5-305
               

               
Cow position:
               
chr5:20779487-20779198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
165, 37
               

               
Conread position:
               
5-305
               

               
Cow position:
               
chr5:57768084-57767787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
20, 90
               

               
Conread position:
               
5-305
               

               
Cow position:
               
chr5:64176218-64175929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
62, 77
               

               
Conread position:
               
5-309
               

               
Cow position:
               
chr5:29827948-29828252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
5-309
               

               
Cow position:
               
chr5:63427109-63426800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
13, 202
               

               
Conread position:
               
5-342
               

               
Cow position:
               
chr5:17999596-17999259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
10, 100
               

               
Conread position:
               
5-368
               

               
Cow position:
               
chr5:41545990-41545650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
62, 23
               

               
Conread position:
               
5-372
               

               
Cow position:
               
chr5:37377767-37378124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
166, 33
               

               
Conread position:
               
6-144
               

               
Cow position:
               
chr5:38647258-38647394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
60, 86
               

               
Conread position:
               
6-154
               

               
Cow position:
               
chr5:7140211-7140057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr5:57101874-57101690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
91, 52
               

               
Conread position:
               
6-199
               

               
Cow position:
               
chr5:32696921-32696729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
186, 0
               

               
Conread position:
               
6-200
               

               
Cow position:
               
chr5:33080889-33080697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
10, 53
               

               
Conread position:
               
6-226
               

               
Cow position:
               
chr5:58793714-58793486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
6-236
               

               
Cow position:
               
chr5:62142570-62142807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
15, 42
               

               
Conread position:
               
6-237
               

               
Cow position:
               
chr5:15426429-15426670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
58, 141
               

               
Conread position:
               
6-238
               

               
Cow position:
               
chr5:72951741-72951977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
6-242
               

               
Cow position:
               
chr5:52000122-52000355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
58, 118
               

               
Conread position:
               
6-244
               

               
Cow position:
               
chr5:3582474-3582699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
6-244
               

               
Cow position:
               
chr5:16025557-16025329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
79, 53
               

               
Conread position:
               
6-250
               

               
Cow position:
               
chr5:6045191-6045441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
6-257
               

               
Cow position:
               
chr5:16893872-16893620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
59, 33
               

               
Conread position:
               
6-258
               

               
Cow position:
               
chr5:34561912-34562171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
6-260
               

               
Cow position:
               
chr5:35125953-35126208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
59, 244
               

               
Conread position:
               
6-260
               

               
Cow position:
               
chr5:50599956-50600201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 71
               

               
Conread position:
               
6-261
               

               
Cow position:
               
chr5:12322901-12322651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
97, 60
               

               
Conread position:
               
6-262
               

               
Cow position:
               
chr5:45845792-45845531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
97, 219
               

               
Conread position:
               
6-262
               

               
Cow position:
               
chr5:68718774-68719027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
101, 17
               

               
Conread position:
               
6-263
               

               
Cow position:
               
chr5:47704225-47703965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
37, 14
               

               
Conread position:
               
6-264
               

               
Cow position:
               
chr5:73418382-73418130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
62, 23
               

               
Conread position:
               
6-265
               

               
Cow position:
               
chr5:56070756-56071018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 246
               

               
Conread position:
               
6-271
               

               
Cow position:
               
chr5:67932564-67932308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
80, 68
               

               
Conread position:
               
6-276
               

               
Cow position:
               
chr5:17063190-17062913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
59, 127
               

               
Conread position:
               
6-280
               

               
Cow position:
               
chr5:57626706-57626960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
91, 42
               

               
Conread position:
               
6-287
               

               
Cow position:
               
chr5:54768010-54767727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
10, 98
               

               
Conread position:
               
6-361
               

               
Cow position:
               
chr5:34300816-34301154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
61, 103
               

               
Conread position:
               
6-372
               

               
Cow position:
               
chr5:58856003-58856369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 104
               

               
Conread position:
               
7-148
               

               
Cow position:
               
chr5:3549885-3549738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
57, 43
               

               
Conread position:
               
7-154
               

               
Cow position:
               
chr5:4797415-4797274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
57, 95
               

               
Conread position:
               
7-239
               

               
Cow position:
               
chr5:45803964-45804194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
112, 33
               

               
Conread position:
               
7-254
               

               
Cow position:
               
chr5:22242873-22242616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
79, 172
               

               
Conread position:
               
7-262
               

               
Cow position:
               
chr5:66338980-66339230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
59, 99
               

               
Conread position:
               
7-265
               

               
Cow position:
               
chr5:57419891-57419636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
10, 101
               

               
Conread position:
               
7-266
               

               
Cow position:
               
chr5:44049599-44049859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
12, 87
               

               
Conread position:
               
7-280
               

               
Cow position:
               
chr5:30950015-30949741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 100
               

               
Conread position:
               
7-339
               

               
Cow position:
               
chr5:55019194-55019520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 65
               

               
Conread position:
               
8-138
               

               
Cow position:
               
chr5:34288569-34288435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
8-147
               

               
Cow position:
               
chr5:34916041-34916173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
51, 71
               

               
Conread position:
               
8-160
               

               
Cow position:
               
chr5:51801071-51800917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
8, 95
               

               
Conread position:
               
8-197
               

               
Cow position:
               
chr5:65883874-65883680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
8-239
               

               
Cow position:
               
chr5:63992261-63992038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
199, 28
               

               
Conread position:
               
8-261
               

               
Cow position:
               
chr5:37646646-37646388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
44, 202
               

               
Conread position:
               
8-266
               

               
Cow position:
               
chr5:64027106-64026856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
59, 92
               

               
Conread position:
               
8-267
               

               
Cow position:
               
chr5:30253643-30253901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 101
               

               
Conread position:
               
8-269
               

               
Cow position:
               
chr5:35247208-35246948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
11, 39
               

               
Conread position:
               
8-286
               

               
Cow position:
               
chr5:43992223-43992505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
17, 104
               

               
Conread position:
               
8-296
               

               
Cow position:
               
chr5:43929835-43929545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
49, 142
               

               
Conread position:
               
9-159
               

               
Cow position:
               
chr5:12709791-12709943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
9-239
               

               
Cow position:
               
chr5:6286521-6286299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
9-262
               

               
Cow position:
               
chr5:33833948-33834199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
57, 10
               

               
Conread position:
               
9-267
               

               
Cow position:
               
chr5:21617361-21617615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 24
               

               
Conread position:
               
9-274
               

               
Cow position:
               
chr5:30232802-30233071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
40, 212
               

               
Conread position:
               
9-296
               

               
Cow position:
               
chr5:12434438-12434735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
78, 113
               

               
Conread position:
               
9-299
               

               
Cow position:
               
chr5:30845016-30845302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
76, 161
               

               
Conread position:
               
9-342
               

               
Cow position:
               
chr5:11427334-11426999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
11, 83
               

               
Conread position:
               
9-368
               

               
Cow position:
               
chr5:59873187-59872819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
59, 15
               

               
Conread position:
               
10-240
               

               
Cow position:
               
chr5:27172077-27171858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
60, 90
               

               
Conread position:
               
10-269
               

               
Cow position:
               
chr5:11229765-11229510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
54, 86
               

               
Conread position:
               
10-272
               

               
Cow position:
               
chr5:37893236-37893501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
19, 83
               

               
Conread position:
               
12-244
               

               
Cow position:
               
chr5:72564666-72564903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
13-372
               

               
Cow position:
               
chr5:4710238-4709874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
274, 79
               

               
Conread position:
               
14-210
               

               
Cow position:
               
chr5:57561428-57561629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
14-211
               

               
Cow position:
               
chr5:56467608-56467796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
51, 78
               

               
Conread position:
               
14-238
               

               
Cow position:
               
chr5:35976429-35976643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
194, 55
               

               
Conread position:
               
14-245
               

               
Cow position:
               
chr5:50482956-50482720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
38, 86
               

               
Conread position:
               
14-266
               

               
Cow position:
               
chr5:53710782-53710530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
50, 191
               

               
Conread position:
               
14-289
               

               
Cow position:
               
chr5:49685362-49685094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
50, 94
               

               
Conread position:
               
14-300
               

               
Cow position:
               
chr5:13717659-13717379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
50, 88
               

               
Conread position:
               
15-236
               

               
Cow position:
               
chr5:34050025-34050249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
15-269
               

               
Cow position:
               
chr5:55756516-55756253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
52, 136
               

               
Conread position:
               
15-280
               

               
Cow position:
               
chr5:37808760-37808489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
54, 250
               

               
Conread position:
               
18-255
               

               
Cow position:
               
chr5:28302835-28302593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
86, 52
               

               
Conread position:
               
19-269
               

               
Cow position:
               
chr5:43402813-43403069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
48, 212
               

               
Conread position:
               
23-244
               

               
Cow position:
               
chr5:56517020-56517243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
10, 85
               

               
Conread position:
               
23-265
               

               
Cow position:
               
chr5:17602281-17602047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
32, 15
               

               
Conread position:
               
24-239
               

               
Cow position:
               
chr5:29903600-29903389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
41, 80
               

               
Conread position:
               
24-250
               

               
Cow position:
               
chr5:47323383-47323607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
43, 77
               

               
Conread position:
               
24-250
               

               
Cow position:
               
chr5:50575703-50575928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
41, 85
               

               
Conread position:
               
24-262
               

               
Cow position:
               
chr5:17555113-17554876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
75, 11
               

               
Conread position:
               
24-266
               

               
Cow position:
               
chr5:64137172-64137421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
45, 91
               

               
Conread position:
               
24-267
               

               
Cow position:
               
chr5:70270783-70271027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
81, 41
               

               
Conread position:
               
24-268
               

               
Cow position:
               
chr5:19523818-19524061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
41, 66
               

               
Conread position:
               
24-342
               

               
Cow position:
               
chr5:3204755-3205053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
40, 63
               

               
Conread position:
               
24-361
               

               
Cow position:
               
chr5:1165092-1165425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
41, 92
               

               
Conread position:
               
24-372
               

               
Cow position:
               
chr5:51935110-51935441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
41, 78
               

               
Conread position:
               
25-258
               

               
Cow position:
               
chr5:458410-458641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
40, 81
               

               
Conread position:
               
25-273
               

               
Cow position:
               
chr5:66551980-66551729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
40, 221
               

               
Conread position:
               
25-372
               

               
Cow position:
               
chr5:40559556-40559898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
40, 70
               

               
Conread position:
               
26-267
               

               
Cow position:
               
chr5:26094242-26094004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
76, 39
               

               
Conread position:
               
26-271
               

               
Cow position:
               
chr5:61914490-61914731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
39, 66
               

               
Conread position:
               
26-361
               

               
Cow position:
               
chr5:31640340-31640656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
39, 77
               

               
Conread position:
               
27-258
               

               
Cow position:
               
chr5:69636156-69636377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
40, 72
               

               
Conread position:
               
27-265
               

               
Cow position:
               
chr5:19752226-19752462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
38, 45
               

               
Conread position:
               
28-287
               

               
Cow position:
               
chr5:29912341-29912601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
137, 191
               

               
Conread position:
               
30-199
               

               
Cow position:
               
chr5:33537792-33537962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
21, 10
               

               
Conread position:
               
31-299
               

               
Cow position:
               
chr5:4166570-4166834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
8, 42
               

               
Conread position:
               
33-269
               

               
Cow position:
               
chr5:11769194-11769432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
8, 119
               

               
Conread position:
               
35-249
               

               
Cow position:
               
chr5:28035669-28035886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
9, 146
               

               
Conread position:
               
35-268
               

               
Cow position:
               
chr5:63234897-63234667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
27, 115
               

               
Conread position:
               
35-361
               

               
Cow position:
               
chr5:38689614-38689280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
30, 229
               

               
Conread position:
               
36-211
               

               
Cow position:
               
chr5:67212286-67212467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
37-239
               

               
Cow position:
               
chr5:1461018-1461223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
35, 78
               

               
Conread position:
               
39-241
               

               
Cow position:
               
chr5:26150488-26150286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
24, 129
               

               
Conread position:
               
42-247
               

               
Cow position:
               
chr5:63150231-63150027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
19, 53
               

               
Conread position:
               
42-265
               

               
Cow position:
               
chr5:59627038-59626812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 181
               

               
Conread position:
               
43-281
               

               
Cow position:
               
chr5:56211840-56212080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
66, 121
               

               
Conread position:
               
45-372
               

               
Cow position:
               
chr5:45420195-45419868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
19, 58
               

               
Conread position:
               
48-266
               

               
Cow position:
               
chr5:66366449-66366676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
19, 130
               

               
Conread position:
               
50-287
               

               
Cow position:
               
chr5:56339074-56338838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
231, 57
               

               
Conread position:
               
50-300
               

               
Cow position:
               
chr5:55796017-55795770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
121, 15
               

               
Conread position:
               
52-264
               

               
Cow position:
               
chr5:35982793-35982575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
53-284
               

               
Cow position:
               
chr5:24136660-24136893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
12, 154
               

               
Conread position:
               
54-265
               

               
Cow position:
               
chr5:8736340-8736117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
16, 10
               

               
Conread position:
               
59-259
               

               
Cow position:
               
chr5:67118371-67118574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
8, 149
               

               
Conread position:
               
63-200
               

               
Cow position:
               
chr5:63192783-63192646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
41, 109
               

               
Conread position:
               
63-265
               

               
Cow position:
               
chr5:69099677-69099879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
42, 186
               

               
Conread position:
               
63-268
               

               
Cow position:
               
chr5:72006534-72006328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
46, 187
               

               
Conread position:
               
63-279
               

               
Cow position:
               
chr5:43408400-43408180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
42, 65
               

               
Conread position:
               
63-279
               

               
Cow position:
               
chr5:49342090-49341877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
45, 13
               

               
Conread position:
               
64-260
               

               
Cow position:
               
chr5:66530877-66531070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
33, 143
               

               
Conread position:
               
64-277
               

               
Cow position:
               
chr5:31052345-31052551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
178, 40
               

               
Conread position:
               
65-264
               

               
Cow position:
               
chr5:61102675-61102875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
88, 75
               

               
Conread position:
               
65-267
               

               
Cow position:
               
chr5:20288303-20288098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
164, 0
               

               
Conread position:
               
66-278
               

               
Cow position:
               
chr5:49501863-49501651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
21, 39
               

               
Conread position:
               
70-262
               

               
Cow position:
               
chr5:57686775-57686582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
17, 180
               

               
Conread position:
               
70-265
               

               
Cow position:
               
chr5:66466284-66466474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
71-267
               

               
Cow position:
               
chr5:26549175-26548983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
27, 166
               

               
Conread position:
               
72-266
               

               
Cow position:
               
chr5:22795181-22795377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
33, 100
               

               
Conread position:
               
79-280
               

               
Cow position:
               
chr5:57230365-57230164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
26, 164
               

               
Conread position:
               
79-281
               

               
Cow position:
               
chr5:61875517-61875714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
187, 48
               

               
Conread position:
               
86-285
               

               
Cow position:
               
chr5:58555117-58555316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
33, 181
               

               
Conread position:
               
92-262
               

               
Cow position:
               
chr5:9170593-9170429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
95-262
               

               
Cow position:
               
chr5:34915062-34914896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
97-264
               

               
Cow position:
               
chr5:24069382-24069544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
32, 45
               

               
Conread position:
               
100-258
               

               
Cow position:
               
chr5:50824587-50824742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
100-310
               

               
Cow position:
               
chr5:55129338-55129548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
104-239
               

               
Cow position:
               
chr5:21223323-21223457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
102, 23
               

               
Conread position:
               
104-372
               

               
Cow position:
               
chr5:44874192-44874443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
105-259
               

               
Cow position:
               
chr5:9233989-9233832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
107-255
               

               
Cow position:
               
chr5:45126653-45126800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
116, 141
               

               
Conread position:
               
107-262
               

               
Cow position:
               
chr5:69383257-69383410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
108-269
               

               
Cow position:
               
chr5:45187114-45186956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
108-368
               

               
Cow position:
               
chr5:35513218-35513484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
117, 89
               

               
Conread position:
               
116-265
               

               
Cow position:
               
chr5:38168905-38169053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
101, 127
               

               
Conread position:
               
116-365
               

               
Cow position:
               
chr5:35647354-35647589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
117-262
               

               
Cow position:
               
chr5:46704287-46704141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
117-372
               

               
Cow position:
               
chr5:9859407-9859156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
32, 62
               

               
Conread position:
               
123-267
               

               
Cow position:
               
chr5:54312619-54312761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
126-372
               

               
Cow position:
               
chr5:42623159-42622919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
5, 50
               

               
Conread position:
               
129-285
               

               
Cow position:
               
chr5:55849909-55850059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
144-368
               

               
Cow position:
               
chr5:36671640-36671851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
134, 54
               

               
Conread position:
               
164-372
               

               
Cow position:
               
chr5:1090763-1090550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
94, 190
               
Show alignments to all cow chromosomes.