Cow genome map
| Conread name: | Ss1.1-rpigcf0_018239.5 |
| Conread position: | 1-205 |
| Cow position: | chr11:15998538-15998746 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 167 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 36, 120 |
| Conread position: | 1-214 |
| Cow position: | chr11:24243109-24243320 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 189, 15 |
| Conread position: | 1-215 |
| Cow position: | chr11:44495954-44495732 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 32, 56 |
| Conread position: | 1-232 |
| Cow position: | chr11:44157592-44157357 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 82 |
| Conread position: | 1-263 |
| Cow position: | chr11:66726109-66726375 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 67 |
| Conread position: | 1-267 |
| Cow position: | chr11:10210319-10210048 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 68 |
| Conread position: | 1-267 |
| Cow position: | chr11:45548121-45548388 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 9, 120 |
| Conread position: | 1-274 |
| Cow position: | chr11:44860881-44860607 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 1-278 |
| Cow position: | chr11:47761287-47761017 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 32, 141 |
| Conread position: | 1-280 |
| Cow position: | chr11:30125603-30125335 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 29, 198 |
| Conread position: | 1-285 |
| Cow position: | chr11:43732054-43732337 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 231 |
| Conread position: | 1-286 |
| Cow position: | chr11:9157782-9157499 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 137 |
| Conread position: | 1-286 |
| Cow position: | chr11:14729878-14729589 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 9, 42 |
| Conread position: | 1-287 |
| Cow position: | chr11:77728884-77728585 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-289 |
| Cow position: | chr11:19102843-19102549 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 1-289 |
| Cow position: | chr11:26125289-26124994 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 1-289 |
| Cow position: | chr11:58134013-58134324 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 93 |
| Conread position: | 1-300 |
| Cow position: | chr11:67867661-67867365 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 9, 123 |
| Conread position: | 1-301 |
| Cow position: | chr11:30304881-30305175 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 72 |
| Conread position: | 1-316 |
| Cow position: | chr11:37477476-37477149 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 1-317 |
| Cow position: | chr11:17108042-17107716 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 68 |
| Conread position: | 1-317 |
| Cow position: | chr11:19064606-19064279 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 1-317 |
| Cow position: | chr11:28230105-28229787 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 61 |
| Conread position: | 1-317 |
| Cow position: | chr11:53287811-53287486 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 307 |
| Conread position: | 1-317 |
| Cow position: | chr11:57628403-57628076 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-317 |
| Cow position: | chr11:63659938-63659618 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 278 |
| Conread position: | 1-317 |
| Cow position: | chr11:67846925-67846601 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 1-322 |
| Cow position: | chr11:20921102-20920770 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-322 |
| Cow position: | chr11:25527216-25527533 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 50 |
| Conread position: | 1-322 |
| Cow position: | chr11:61401396-61401076 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 284, 45 |
| Conread position: | 1-324 |
| Cow position: | chr11:4271226-4270884 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 1-324 |
| Cow position: | chr11:37065480-37065141 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 68 |
| Conread position: | 1-324 |
| Cow position: | chr11:45111007-45111346 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 77 |
| Conread position: | 1-326 |
| Cow position: | chr11:85394167-85393832 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 64 |
| Conread position: | 1-330 |
| Cow position: | chr11:30186941-30187264 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 9, 220 |
| Conread position: | 1-334 |
| Cow position: | chr11:8887509-8887170 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 71 |
| Conread position: | 1-334 |
| Cow position: | chr11:9659756-9659401 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 348 |
| Conread position: | 1-334 |
| Cow position: | chr11:21466720-21467065 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1-334 |
| Cow position: | chr11:54209262-54209600 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 66 |
| Conread position: | 1-334 |
| Cow position: | chr11:75920058-75920390 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 216 |
| Conread position: | 1-337 |
| Cow position: | chr11:29668985-29668646 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 225 |
| Conread position: | 1-340 |
| Cow position: | chr11:8262056-8261713 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 72 |
| Conread position: | 1-341 |
| Cow position: | chr11:40776899-40776554 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 334 |
| Conread position: | 1-343 |
| Cow position: | chr11:4041428-4041080 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 162 |
| Conread position: | 1-348 |
| Cow position: | chr11:10847088-10847443 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 202 |
| Conread position: | 1-348 |
| Cow position: | chr11:11987752-11988108 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 91 |
| Conread position: | 1-348 |
| Cow position: | chr11:24392969-24393319 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 79 |
| Conread position: | 1-348 |
| Cow position: | chr11:28054952-28054598 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 90 |
| Conread position: | 1-348 |
| Cow position: | chr11:38835773-38835430 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 145 |
| Conread position: | 1-348 |
| Cow position: | chr11:72110317-72109964 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 64 |
| Conread position: | 1-352 |
| Cow position: | chr11:12358778-12358427 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 292 |
| Conread position: | 1-358 |
| Cow position: | chr11:12351426-12351052 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 345 |
| Conread position: | 1-359 |
| Cow position: | chr11:44230771-44231125 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 38 |
| Conread position: | 1-406 |
| Cow position: | chr11:87127487-87127901 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 280 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 25, 15 |
| Conread position: | 1-563 |
| Cow position: | chr11:10089977-10090554 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 137 |
| Conread position: | 2-141 |
| Cow position: | chr11:33195046-33194910 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 2-317 |
| Cow position: | chr11:3492664-3492981 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 9 |
| Conread position: | 2-317 |
| Cow position: | chr11:15983277-15983594 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 9 |
| Conread position: | 2-317 |
| Cow position: | chr11:32450521-32450837 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 9 |
| Conread position: | 2-317 |
| Cow position: | chr11:52419041-52419358 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 9 |
| Conread position: | 2-322 |
| Cow position: | chr11:5343564-5343242 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 9 |
| Conread position: | 2-322 |
| Cow position: | chr11:64045651-64045973 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 9 |
| Conread position: | 3-307 |
| Cow position: | chr11:7113241-7113554 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 91 |
| Conread position: | 3-343 |
| Cow position: | chr11:8244352-8244702 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 91 |
| Conread position: | 3-511 |
| Cow position: | chr11:8282722-8283230 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 63 |
| Conread position: | 4-222 |
| Cow position: | chr11:32684935-32685154 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 166 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 166, 0 |
| Conread position: | 5-333 |
| Cow position: | chr11:9606918-9606594 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 33 |
| Conread position: | 5-340 |
| Cow position: | chr11:28063332-28063667 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 16 |
| Conread position: | 7-182 |
| Cow position: | chr11:65836079-65836251 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 7-215 |
| Cow position: | chr11:13067361-13067162 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 7-215 |
| Cow position: | chr11:13162643-13162842 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 7-287 |
| Cow position: | chr11:39833401-39833687 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 61, 35 |
| Conread position: | 7-334 |
| Cow position: | chr11:37491999-37491658 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 14 |
| Conread position: | 7-343 |
| Cow position: | chr11:4027905-4027565 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 89 |
| Conread position: | 11-341 |
| Cow position: | chr11:34020555-34020888 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 28 |
| Conread position: | 16-237 |
| Cow position: | chr11:13581321-13581101 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 158, 22 |
| Conread position: | 16-320 |
| Cow position: | chr11:48084778-48085083 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 219, 17 |
| Conread position: | 17-289 |
| Cow position: | chr11:37093396-37093125 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 259, 0 |
| Conread position: | 17-317 |
| Cow position: | chr11:67450163-67450468 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 151 |
| Conread position: | 17-322 |
| Cow position: | chr11:36744515-36744205 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 267, 0 |
| Conread position: | 17-322 |
| Cow position: | chr11:73476973-73477283 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 268, 0 |
| Conread position: | 17-335 |
| Cow position: | chr11:23876971-23877290 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 80 |
| Conread position: | 17-342 |
| Cow position: | chr11:43514965-43514634 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 0 |
| Conread position: | 17-348 |
| Cow position: | chr11:71329309-71329645 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 0 |
| Conread position: | 18-262 |
| Cow position: | chr11:3253633-3253390 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 37, 13 |
| Conread position: | 18-364 |
| Cow position: | chr11:17220555-17220198 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 20-287 |
| Cow position: | chr11:26566049-26565786 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 211, 0 |
| Conread position: | 21-169 |
| Cow position: | chr11:44895351-44895204 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 59, 69 |
| Conread position: | 21-238 |
| Cow position: | chr11:10049789-10050006 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 168 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 21-247 |
| Cow position: | chr11:65161893-65161663 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 150, 30 |
| Conread position: | 21-282 |
| Cow position: | chr11:52886824-52886573 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 196 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 17, 45 |
| Conread position: | 21-388 |
| Cow position: | chr11:3240317-3240678 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 262 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 35, 130 |
| Conread position: | 21-405 |
| Cow position: | chr11:42429003-42429394 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 89 |
| Conread position: | 22-402 |
| Cow position: | chr11:75874116-75873726 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 252 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 153, 44 |
| Conread position: | 25-261 |
| Cow position: | chr11:81852958-81852723 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 42 |
| Conread position: | 26-255 |
| Cow position: | chr11:31414248-31414023 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 27-289 |
| Cow position: | chr11:41171017-41170755 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 27-317 |
| Cow position: | chr11:1496398-1496104 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 258, 86 |
| Conread position: | 27-399 |
| Cow position: | chr11:32272029-32271672 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 131, 102 |
| Conread position: | 28-235 |
| Cow position: | chr11:20688346-20688545 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 29-202 |
| Cow position: | chr11:7688288-7688460 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 31-247 |
| Cow position: | chr11:10880620-10880830 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 146, 14 |
| Conread position: | 31-350 |
| Cow position: | chr11:45655673-45655987 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 111, 51 |
| Conread position: | 33-165 |
| Cow position: | chr11:59370669-59370537 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 113, 30 |
| Conread position: | 57-384 |
| Cow position: | chr11:29233953-29233628 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 11, 160 |
| Conread position: | 62-334 |
| Cow position: | chr11:8519703-8519975 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 142 |
| Conread position: | 68-398 |
| Cow position: | chr11:17280578-17280255 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 312, 163 |
| Conread position: | 73-283 |
| Cow position: | chr11:9734926-9734717 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 86-361 |
| Cow position: | chr11:18073687-18073409 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 203 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 141, 123 |
| Conread position: | 90-317 |
| Cow position: | chr11:38505866-38505635 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 96 |
| Conread position: | 101-324 |
| Cow position: | chr11:31925916-31926148 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 57, 89 |
| Conread position: | 115-373 |
| Cow position: | chr11:4065471-4065202 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 194 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 68, 235 |
| Conread position: | 123-289 |
| Cow position: | chr11:30183533-30183377 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 123-343 |
| Cow position: | chr11:12093328-12093554 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 172 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 167, 0 |
| Conread position: | 127-317 |
| Cow position: | chr11:33194778-33194583 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 154 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 158, 0 |
| Conread position: | 130-289 |
| Cow position: | chr11:77235493-77235652 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 136 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 132-348 |
| Cow position: | chr11:53432286-53432065 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 158, 0 |
| Conread position: | 136-340 |
| Cow position: | chr11:9220336-9220130 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 167 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 152, 184 |
| Conread position: | 147-565 |
| Cow position: | chr11:7316668-7317089 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 65 |
| Conread position: | 181-331 |
| Cow position: | chr11:76374371-76374216 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 109, 90 |
| Conread position: | 204-331 |
| Cow position: | chr11:59369460-59369590 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 84, 124 |
| Conread position: | 213-334 |
| Cow position: | chr11:8267681-8267554 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 289-473 |
| Cow position: | chr11:30125097-30124909 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 295-538 |
| Cow position: | chr11:7113836-7114069 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 19, 0 |
Show alignments to all cow chromosomes.