Cow genome map
| Conread name: | Ss1.1-rpigcf0_018239.5 |
| Conread position: | 1-135 |
| Cow position: | chr15:6650398-6650536 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 39, 127 |
| Conread position: | 1-141 |
| Cow position: | chr15:55788-55934 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 32, 94 |
| Conread position: | 1-155 |
| Cow position: | chr15:45886379-45886536 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 36, 112 |
| Conread position: | 1-191 |
| Cow position: | chr15:21816159-21815962 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 1-279 |
| Cow position: | chr15:4109326-4109036 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 62, 17 |
| Conread position: | 1-280 |
| Cow position: | chr15:7928208-7928486 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 9, 51 |
| Conread position: | 1-281 |
| Cow position: | chr15:3261820-3261543 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 208 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 36, 143 |
| Conread position: | 1-282 |
| Cow position: | chr15:38979506-38979792 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 260 |
| Conread position: | 1-288 |
| Cow position: | chr15:42936301-42936593 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 92 |
| Conread position: | 1-289 |
| Cow position: | chr15:2076234-2076528 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 93 |
| Conread position: | 1-289 |
| Cow position: | chr15:6554267-6553975 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 71 |
| Conread position: | 1-289 |
| Cow position: | chr15:21666159-21665866 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 65 |
| Conread position: | 1-291 |
| Cow position: | chr15:44828402-44828699 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 117 |
| Conread position: | 1-313 |
| Cow position: | chr15:4678080-4678386 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 289, 41 |
| Conread position: | 1-317 |
| Cow position: | chr15:1781841-1782168 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 1-317 |
| Cow position: | chr15:1834873-1834547 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 74 |
| Conread position: | 1-317 |
| Cow position: | chr15:2011670-2011995 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 147 |
| Conread position: | 1-317 |
| Cow position: | chr15:2648069-2647742 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-317 |
| Cow position: | chr15:3888467-3888793 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 185 |
| Conread position: | 1-317 |
| Cow position: | chr15:6472323-6472003 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 143 |
| Conread position: | 1-317 |
| Cow position: | chr15:28490554-28490227 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1-317 |
| Cow position: | chr15:42320830-42320507 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 1-322 |
| Cow position: | chr15:4143227-4142899 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 10 |
| Conread position: | 1-322 |
| Cow position: | chr15:24793637-24793965 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 16 |
| Conread position: | 1-322 |
| Cow position: | chr15:25789381-25789051 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 123 |
| Conread position: | 1-324 |
| Cow position: | chr15:690379-690710 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 152 |
| Conread position: | 1-324 |
| Cow position: | chr15:4961229-4961548 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 38 |
| Conread position: | 1-324 |
| Cow position: | chr15:7922054-7921722 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 173 |
| Conread position: | 1-324 |
| Cow position: | chr15:10888197-10888525 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 57 |
| Conread position: | 1-324 |
| Cow position: | chr15:32494799-32494466 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 236 |
| Conread position: | 1-326 |
| Cow position: | chr15:4733448-4733781 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 171 |
| Conread position: | 1-326 |
| Cow position: | chr15:7233899-7234226 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 74 |
| Conread position: | 1-331 |
| Cow position: | chr15:4795270-4795605 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 147 |
| Conread position: | 1-332 |
| Cow position: | chr15:7836831-7837172 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 52 |
| Conread position: | 1-334 |
| Cow position: | chr15:7522901-7522562 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 72 |
| Conread position: | 1-334 |
| Cow position: | chr15:21961094-21961439 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-334 |
| Cow position: | chr15:36648499-36648839 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 71 |
| Conread position: | 1-339 |
| Cow position: | chr15:6078319-6078674 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 346 |
| Conread position: | 1-341 |
| Cow position: | chr15:35735042-35735389 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 299 |
| Conread position: | 1-341 |
| Cow position: | chr15:41365767-41366112 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 190 |
| Conread position: | 1-342 |
| Cow position: | chr15:4170108-4169757 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 73 |
| Conread position: | 1-342 |
| Cow position: | chr15:4384862-4385208 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 38 |
| Conread position: | 1-342 |
| Cow position: | chr15:4921731-4922091 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 344 |
| Conread position: | 1-342 |
| Cow position: | chr15:12421579-12421226 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-342 |
| Cow position: | chr15:18333240-18332888 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 139 |
| Conread position: | 1-342 |
| Cow position: | chr15:18576307-18576655 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 105 |
| Conread position: | 1-342 |
| Cow position: | chr15:51216176-51216529 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 128 |
| Conread position: | 1-343 |
| Cow position: | chr15:4681817-4682172 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 76 |
| Conread position: | 1-343 |
| Cow position: | chr15:4811910-4812260 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 111 |
| Conread position: | 1-343 |
| Cow position: | chr15:7260214-7260568 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 170 |
| Conread position: | 1-343 |
| Cow position: | chr15:8000657-8000292 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 78 |
| Conread position: | 1-343 |
| Cow position: | chr15:8099075-8099429 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 172 |
| Conread position: | 1-343 |
| Cow position: | chr15:14583031-14582678 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 342 |
| Conread position: | 1-343 |
| Cow position: | chr15:25186356-25186021 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 68 |
| Conread position: | 1-343 |
| Cow position: | chr15:42490792-42491143 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 71 |
| Conread position: | 1-344 |
| Cow position: | chr15:1763679-1764032 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 160 |
| Conread position: | 1-344 |
| Cow position: | chr15:4649424-4649769 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 17 |
| Conread position: | 1-344 |
| Cow position: | chr15:6156367-6156011 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-344 |
| Cow position: | chr15:7894623-7894289 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 289, 36 |
| Conread position: | 1-344 |
| Cow position: | chr15:8750014-8750368 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 106 |
| Conread position: | 1-348 |
| Cow position: | chr15:15347533-15347175 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-352 |
| Cow position: | chr15:24294678-24295036 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 296 |
| Conread position: | 1-358 |
| Cow position: | chr15:3037923-3037555 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 72 |
| Conread position: | 1-374 |
| Cow position: | chr15:51671941-51672322 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 293, 150 |
| Conread position: | 1-381 |
| Cow position: | chr15:22151797-22152184 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 262 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 27, 150 |
| Conread position: | 1-389 |
| Cow position: | chr15:8408145-8408540 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 225 |
| Conread position: | 1-390 |
| Cow position: | chr15:17787573-17787180 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 39 |
| Conread position: | 1-405 |
| Cow position: | chr15:15266059-15265658 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 32 |
| Conread position: | 1-487 |
| Cow position: | chr15:32679962-32679498 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 50 |
| Conread position: | 1-565 |
| Cow position: | chr15:35648632-35648082 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 11 |
| Conread position: | 1-565 |
| Cow position: | chr15:36642212-36642768 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 289, 38 |
| Conread position: | 2-181 |
| Cow position: | chr15:22204516-22204340 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 2-187 |
| Cow position: | chr15:13428636-13428818 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 2-210 |
| Cow position: | chr15:21877760-21877555 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 161 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 2-278 |
| Cow position: | chr15:2676708-2676442 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 53, 40 |
| Conread position: | 2-317 |
| Cow position: | chr15:1519552-1519236 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 9 |
| Conread position: | 2-322 |
| Cow position: | chr15:29009440-29009758 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 9 |
| Conread position: | 2-327 |
| Cow position: | chr15:1772096-1772423 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 9 |
| Conread position: | 2-327 |
| Cow position: | chr15:36970521-36970848 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 9 |
| Conread position: | 2-334 |
| Cow position: | chr15:23157240-23156911 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 100 |
| Conread position: | 3-316 |
| Cow position: | chr15:20749005-20749329 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 3-334 |
| Cow position: | chr15:17292028-17292369 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 91 |
| Conread position: | 3-334 |
| Cow position: | chr15:53338628-53338955 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 285, 67 |
| Conread position: | 3-343 |
| Cow position: | chr15:32693138-32693481 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 28 |
| Conread position: | 3-344 |
| Cow position: | chr15:37392090-37392434 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 126 |
| Conread position: | 4-317 |
| Cow position: | chr15:50124349-50124028 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 220 |
| Conread position: | 5-327 |
| Cow position: | chr15:3010251-3009927 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 280, 6 |
| Conread position: | 5-390 |
| Cow position: | chr15:11299208-11298829 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 204, 14 |
| Conread position: | 7-157 |
| Cow position: | chr15:49676614-49676762 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 24, 46 |
| Conread position: | 7-163 |
| Cow position: | chr15:9428568-9428729 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 7-324 |
| Cow position: | chr15:6277664-6277339 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 62 |
| Conread position: | 7-359 |
| Cow position: | chr15:20357678-20357332 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 255 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 235, 32 |
| Conread position: | 7-406 |
| Cow position: | chr15:24715823-24716221 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 67 |
| Conread position: | 8-262 |
| Cow position: | chr15:22920724-22920979 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 8-317 |
| Cow position: | chr15:4196062-4196377 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 8-334 |
| Cow position: | chr15:6370176-6369850 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 42 |
| Conread position: | 9-289 |
| Cow position: | chr15:51800329-51800605 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 138 |
| Conread position: | 12-334 |
| Cow position: | chr15:35747896-35748225 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 61 |
| Conread position: | 12-342 |
| Cow position: | chr15:35754000-35753657 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 225 |
| Conread position: | 12-343 |
| Cow position: | chr15:4671030-4671370 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 48 |
| Conread position: | 12-348 |
| Cow position: | chr15:31358507-31358830 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 278, 64 |
| Conread position: | 12-352 |
| Cow position: | chr15:44069525-44069864 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 9 |
| Conread position: | 12-358 |
| Cow position: | chr15:17271794-17271440 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 322 |
| Conread position: | 13-252 |
| Cow position: | chr15:7788766-7788527 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 184 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 22, 56 |
| Conread position: | 13-410 |
| Cow position: | chr15:1236925-1237325 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 111 |
| Conread position: | 16-324 |
| Cow position: | chr15:525243-524941 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 266 |
| Conread position: | 17-136 |
| Cow position: | chr15:32710331-32710450 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 17-289 |
| Cow position: | chr15:17039643-17039377 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 17-317 |
| Cow position: | chr15:444218-444522 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 267, 228 |
| Conread position: | 17-317 |
| Cow position: | chr15:18268378-18268073 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 268, 0 |
| Conread position: | 17-342 |
| Cow position: | chr15:19738444-19738112 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 97 |
| Conread position: | 18-324 |
| Cow position: | chr15:7544490-7544802 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 21-351 |
| Cow position: | chr15:1662990-1663313 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 222 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 157, 39 |
| Conread position: | 21-360 |
| Cow position: | chr15:16542281-16542625 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 243 |
| Conread position: | 21-390 |
| Cow position: | chr15:2007153-2007522 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 253 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 55, 16 |
| Conread position: | 21-393 |
| Cow position: | chr15:35680683-35680316 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 266 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 59, 16 |
| Conread position: | 21-400 |
| Cow position: | chr15:32733171-32732799 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 260 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 248, 58 |
| Conread position: | 21-405 |
| Cow position: | chr15:324559-324938 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 267, 34 |
| Conread position: | 21-405 |
| Cow position: | chr15:40105079-40105464 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 269, 15 |
| Conread position: | 26-405 |
| Cow position: | chr15:12614686-12615064 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 264, 137 |
| Conread position: | 27-148 |
| Cow position: | chr15:316734-316613 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 27-189 |
| Cow position: | chr15:1253923-1254077 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 27-317 |
| Cow position: | chr15:50146697-50146992 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 258, 0 |
| Conread position: | 27-324 |
| Cow position: | chr15:4764824-4765125 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 261, 0 |
| Conread position: | 27-328 |
| Cow position: | chr15:17080582-17080277 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 258, 156 |
| Conread position: | 27-390 |
| Cow position: | chr15:11624529-11624891 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 257 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 36, 41 |
| Conread position: | 29-390 |
| Cow position: | chr15:6621964-6622322 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 253 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 252, 31 |
| Conread position: | 29-410 |
| Cow position: | chr15:21448922-21449316 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 92 |
| Conread position: | 42-178 |
| Cow position: | chr15:10479061-10478927 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 42-323 |
| Cow position: | chr15:6593309-6593025 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 246, 91 |
| Conread position: | 51-266 |
| Cow position: | chr15:6458619-6458837 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 123, 20 |
| Conread position: | 51-358 |
| Cow position: | chr15:2924533-2924841 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 239, 37 |
| Conread position: | 55-359 |
| Cow position: | chr15:32672534-32672838 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 211 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 23, 9 |
| Conread position: | 55-405 |
| Cow position: | chr15:36627025-36626668 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 55-571 |
| Cow position: | chr15:370035-369523 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 191 |
| Conread position: | 56-358 |
| Cow position: | chr15:10787482-10787172 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 56-410 |
| Cow position: | chr15:686175-686527 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 235, 131 |
| Conread position: | 59-232 |
| Cow position: | chr15:32722535-32722363 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 64-343 |
| Cow position: | chr15:328093-328368 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 224, 110 |
| Conread position: | 70-389 |
| Cow position: | chr15:7934012-7934318 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 217, 64 |
| Conread position: | 100-341 |
| Cow position: | chr15:2589774-2589532 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 185, 91 |
| Conread position: | 100-341 |
| Cow position: | chr15:2592135-2591893 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 185, 91 |
| Conread position: | 127-317 |
| Cow position: | chr15:56206-56401 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 155 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 158, 0 |
| Conread position: | 132-359 |
| Cow position: | chr15:498111-498341 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 155, 56 |
| Conread position: | 139-324 |
| Cow position: | chr15:6650259-6650079 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 151, 64 |
| Conread position: | 153-389 |
| Cow position: | chr15:9429273-9429526 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 168-342 |
| Cow position: | chr15:32710453-32710632 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 168-343 |
| Cow position: | chr15:21623458-21623637 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 122, 31 |
| Conread position: | 177-322 |
| Cow position: | chr15:1882736-1882587 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 108, 63 |
| Conread position: | 181-343 |
| Cow position: | chr15:5068623-5068791 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 109, 0 |
Show alignments to all cow chromosomes.