Cow genome map
| Conread name: | Ss1.1-rpigcf0_018239.5 |
| Conread position: | 1-131 |
| Cow position: | chr2:41149515-41149650 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 1-169 |
| Cow position: | chr2:10733368-10733196 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 28, 124 |
| Conread position: | 1-170 |
| Cow position: | chr2:975806-975631 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 17, 74 |
| Conread position: | 1-198 |
| Cow position: | chr2:6877962-6878152 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 102, 30 |
| Conread position: | 1-215 |
| Cow position: | chr2:20876154-20875948 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 1-232 |
| Cow position: | chr2:10730087-10729849 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 192 |
| Conread position: | 1-238 |
| Cow position: | chr2:24145747-24145984 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 184 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 32, 156 |
| Conread position: | 1-267 |
| Cow position: | chr2:46536670-46536405 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 9, 58 |
| Conread position: | 1-268 |
| Cow position: | chr2:52655941-52656210 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 66 |
| Conread position: | 1-283 |
| Cow position: | chr2:85356298-85356019 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 257 |
| Conread position: | 1-289 |
| Cow position: | chr2:283221-282927 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-289 |
| Cow position: | chr2:36979847-36980140 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 146 |
| Conread position: | 1-297 |
| Cow position: | chr2:56438249-56437955 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 225 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 27, 10 |
| Conread position: | 1-308 |
| Cow position: | chr2:14560671-14560969 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 226, 38 |
| Conread position: | 1-317 |
| Cow position: | chr2:212747-212423 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 72 |
| Conread position: | 1-317 |
| Cow position: | chr2:5813930-5813587 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-317 |
| Cow position: | chr2:59414208-59413882 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 1-320 |
| Cow position: | chr2:50402743-50403062 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 7, 40 |
| Conread position: | 1-322 |
| Cow position: | chr2:3325093-3324761 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-322 |
| Cow position: | chr2:49471718-49472050 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-323 |
| Cow position: | chr2:41685985-41686322 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1-324 |
| Cow position: | chr2:46946139-46946472 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 260 |
| Conread position: | 1-332 |
| Cow position: | chr2:81256289-81256618 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 94 |
| Conread position: | 1-333 |
| Cow position: | chr2:6772700-6772359 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 256 |
| Conread position: | 1-333 |
| Cow position: | chr2:82167080-82167422 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 336 |
| Conread position: | 1-334 |
| Cow position: | chr2:422543-422884 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 117 |
| Conread position: | 1-334 |
| Cow position: | chr2:10711958-10711620 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 61 |
| Conread position: | 1-334 |
| Cow position: | chr2:10843867-10843534 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 45 |
| Conread position: | 1-334 |
| Cow position: | chr2:19009705-19010048 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 93 |
| Conread position: | 1-334 |
| Cow position: | chr2:44106636-44106293 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 1-334 |
| Cow position: | chr2:44346187-44346531 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 319 |
| Conread position: | 1-334 |
| Cow position: | chr2:53473686-53473345 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 215 |
| Conread position: | 1-337 |
| Cow position: | chr2:28792718-28793069 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 165 |
| Conread position: | 1-341 |
| Cow position: | chr2:176057-175703 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 348 |
| Conread position: | 1-341 |
| Cow position: | chr2:78761947-78762290 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 257 |
| Conread position: | 1-342 |
| Cow position: | chr2:10186762-10186407 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 1-342 |
| Cow position: | chr2:65938976-65938625 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 198 |
| Conread position: | 1-342 |
| Cow position: | chr2:78741602-78741953 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 335 |
| Conread position: | 1-343 |
| Cow position: | chr2:16899718-16900073 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-343 |
| Cow position: | chr2:44935613-44935261 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 58 |
| Conread position: | 1-344 |
| Cow position: | chr2:6960217-6960574 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 188 |
| Conread position: | 1-348 |
| Cow position: | chr2:42671916-42671559 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 191 |
| Conread position: | 1-348 |
| Cow position: | chr2:50077072-50077426 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 65 |
| Conread position: | 1-348 |
| Cow position: | chr2:52062138-52062496 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-352 |
| Cow position: | chr2:53329220-53329578 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 65 |
| Conread position: | 1-358 |
| Cow position: | chr2:11969290-11968928 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 20 |
| Conread position: | 1-358 |
| Cow position: | chr2:41172159-41172517 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 66 |
| Conread position: | 1-358 |
| Cow position: | chr2:52152381-52152022 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 66 |
| Conread position: | 1-359 |
| Cow position: | chr2:45921775-45921422 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 247 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 257, 36 |
| Conread position: | 1-388 |
| Cow position: | chr2:20874692-20874310 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 262 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 281, 28 |
| Conread position: | 1-388 |
| Cow position: | chr2:22077263-22077653 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 94 |
| Conread position: | 1-391 |
| Cow position: | chr2:5870862-5870483 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 60 |
| Conread position: | 1-405 |
| Cow position: | chr2:7901757-7902164 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 64 |
| Conread position: | 1-564 |
| Cow position: | chr2:39621765-39622339 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 19 |
| Conread position: | 1-565 |
| Cow position: | chr2:34565455-34564894 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 76 |
| Conread position: | 1-572 |
| Cow position: | chr2:14821981-14822551 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 26 |
| Conread position: | 1-573 |
| Cow position: | chr2:28643647-28643084 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 70 |
| Conread position: | 2-287 |
| Cow position: | chr2:1111756-1111485 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 2-313 |
| Cow position: | chr2:4404866-4404554 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 9 |
| Conread position: | 2-317 |
| Cow position: | chr2:2413315-2412998 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 13 |
| Conread position: | 2-317 |
| Cow position: | chr2:9907394-9907711 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 9 |
| Conread position: | 2-317 |
| Cow position: | chr2:25030994-25030678 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 13 |
| Conread position: | 2-317 |
| Cow position: | chr2:41656564-41656880 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 13 |
| Conread position: | 2-317 |
| Cow position: | chr2:44090781-44091099 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 9 |
| Conread position: | 2-317 |
| Cow position: | chr2:47038931-47038616 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 13 |
| Conread position: | 2-317 |
| Cow position: | chr2:51991049-51990732 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 9 |
| Conread position: | 2-319 |
| Cow position: | chr2:2380607-2380907 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 13 |
| Conread position: | 2-322 |
| Cow position: | chr2:2184775-2184453 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 9 |
| Conread position: | 2-322 |
| Cow position: | chr2:57142205-57141883 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 9 |
| Conread position: | 2-322 |
| Cow position: | chr2:80956155-80955833 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 9 |
| Conread position: | 2-323 |
| Cow position: | chr2:52615953-52616278 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 13 |
| Conread position: | 2-339 |
| Cow position: | chr2:26921178-26921517 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 9 |
| Conread position: | 2-342 |
| Cow position: | chr2:24921880-24922226 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 9 |
| Conread position: | 3-250 |
| Cow position: | chr2:67430518-67430770 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 7, 58 |
| Conread position: | 3-330 |
| Cow position: | chr2:2101994-2101659 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 58 |
| Conread position: | 3-334 |
| Cow position: | chr2:44991806-44991480 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 222 |
| Conread position: | 3-335 |
| Cow position: | chr2:32654819-32655154 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 24 |
| Conread position: | 3-343 |
| Cow position: | chr2:49604196-49604538 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 35 |
| Conread position: | 3-358 |
| Cow position: | chr2:2363671-2364025 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 36 |
| Conread position: | 3-563 |
| Cow position: | chr2:2356997-2356428 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 264 |
| Conread position: | 5-334 |
| Cow position: | chr2:72922356-72922015 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 7-165 |
| Cow position: | chr2:38589643-38589797 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 7-226 |
| Cow position: | chr2:52173840-52173624 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 7-287 |
| Cow position: | chr2:19984691-19984411 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 149, 63 |
| Conread position: | 7-326 |
| Cow position: | chr2:34935064-34935379 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 64, 52 |
| Conread position: | 7-330 |
| Cow position: | chr2:16076821-16076485 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 242 |
| Conread position: | 7-361 |
| Cow position: | chr2:77208133-77208484 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 248 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 174, 62 |
| Conread position: | 7-389 |
| Cow position: | chr2:7211182-7211567 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 103 |
| Conread position: | 7-389 |
| Cow position: | chr2:28746944-28747327 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 43 |
| Conread position: | 7-390 |
| Cow position: | chr2:43959088-43959457 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 273 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 30, 57 |
| Conread position: | 7-565 |
| Cow position: | chr2:28621344-28620802 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 162 |
| Conread position: | 8-188 |
| Cow position: | chr2:20921308-20921127 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 97, 93 |
| Conread position: | 8-336 |
| Cow position: | chr2:57334684-57335013 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 35 |
| Conread position: | 8-576 |
| Cow position: | chr2:16288718-16289281 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 43 |
| Conread position: | 10-503 |
| Cow position: | chr2:36031249-36030757 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 135 |
| Conread position: | 12-384 |
| Cow position: | chr2:20903656-20903304 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 257 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 58, 20 |
| Conread position: | 14-317 |
| Cow position: | chr2:10612138-10611828 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 17-342 |
| Cow position: | chr2:10269167-10268834 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 0 |
| Conread position: | 17-342 |
| Cow position: | chr2:47810504-47810838 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 0 |
| Conread position: | 17-342 |
| Cow position: | chr2:50983735-50983403 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 198 |
| Conread position: | 17-348 |
| Cow position: | chr2:13046198-13045877 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 45 |
| Conread position: | 17-348 |
| Cow position: | chr2:28650733-28650403 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 25 |
| Conread position: | 17-374 |
| Cow position: | chr2:72109034-72108688 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 258 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 109, 43 |
| Conread position: | 18-201 |
| Cow position: | chr2:32458513-32458332 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 146, 133 |
| Conread position: | 18-279 |
| Cow position: | chr2:14518957-14518701 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 36, 164 |
| Conread position: | 18-348 |
| Cow position: | chr2:11159632-11159298 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 272, 138 |
| Conread position: | 20-208 |
| Cow position: | chr2:46402765-46402583 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 20-267 |
| Cow position: | chr2:80586600-80586850 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 20-281 |
| Cow position: | chr2:202156-201908 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 40 |
| Conread position: | 20-287 |
| Cow position: | chr2:290334-290070 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 20-361 |
| Cow position: | chr2:11691684-11692017 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 235 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 262, 49 |
| Conread position: | 20-376 |
| Cow position: | chr2:1647660-1648024 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 227, 146 |
| Conread position: | 21-275 |
| Cow position: | chr2:4235668-4235908 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 21-287 |
| Cow position: | chr2:10294627-10294901 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 156, 43 |
| Conread position: | 21-289 |
| Cow position: | chr2:768896-768623 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 44 |
| Conread position: | 21-349 |
| Cow position: | chr2:36991388-36991716 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 223 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 266, 42 |
| Conread position: | 21-389 |
| Cow position: | chr2:63293076-63292694 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 82 |
| Conread position: | 21-393 |
| Cow position: | chr2:35352866-35353232 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 30 |
| Conread position: | 21-571 |
| Cow position: | chr2:15578074-15577523 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 112 |
| Conread position: | 22-336 |
| Cow position: | chr2:39421075-39421396 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 23-319 |
| Cow position: | chr2:5485741-5485452 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 23 |
| Conread position: | 26-253 |
| Cow position: | chr2:20028292-20028520 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 147, 94 |
| Conread position: | 26-358 |
| Cow position: | chr2:26868774-26869108 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 264, 25 |
| Conread position: | 26-407 |
| Cow position: | chr2:74391613-74391216 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 272 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 146, 69 |
| Conread position: | 27-194 |
| Cow position: | chr2:3730233-3730396 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 78, 125 |
| Conread position: | 27-219 |
| Cow position: | chr2:26865052-26864860 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 152 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 27-317 |
| Cow position: | chr2:5905357-5905065 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 27-321 |
| Cow position: | chr2:42333790-42333488 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 113, 15 |
| Conread position: | 27-323 |
| Cow position: | chr2:3837481-3837206 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 263, 33 |
| Conread position: | 27-343 |
| Cow position: | chr2:50321782-50322108 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 82 |
| Conread position: | 27-406 |
| Cow position: | chr2:3749410-3749805 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 270 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 12, 20 |
| Conread position: | 27-557 |
| Cow position: | chr2:1673163-1672638 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 261, 138 |
| Conread position: | 28-211 |
| Cow position: | chr2:8118067-8118250 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 146 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 28-264 |
| Cow position: | chr2:31550241-31550477 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 32-197 |
| Cow position: | chr2:29147902-29147736 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 42-398 |
| Cow position: | chr2:51305217-51304862 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 209 |
| Conread position: | 46-289 |
| Cow position: | chr2:52350326-52350567 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 178 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 51-344 |
| Cow position: | chr2:5481138-5480842 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 239, 22 |
| Conread position: | 51-380 |
| Cow position: | chr2:59963702-59963369 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 229 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 27, 38 |
| Conread position: | 55-244 |
| Cow position: | chr2:54649288-54649102 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 55-308 |
| Cow position: | chr2:61130784-61130553 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 76, 90 |
| Conread position: | 55-321 |
| Cow position: | chr2:80516602-80516862 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 210 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 103, 32 |
| Conread position: | 55-323 |
| Cow position: | chr2:45213757-45213481 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 55-358 |
| Cow position: | chr2:45968820-45968519 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 205, 17 |
| Conread position: | 55-517 |
| Cow position: | chr2:36054122-36053660 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 397 |
| Conread position: | 60-287 |
| Cow position: | chr2:46465596-46465368 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 10, 75 |
| Conread position: | 60-334 |
| Cow position: | chr2:4926643-4926360 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 68-211 |
| Cow position: | chr2:15062775-15062635 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 74-238 |
| Cow position: | chr2:6638687-6638851 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 76-406 |
| Cow position: | chr2:75676353-75676028 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 173, 15 |
| Conread position: | 84-405 |
| Cow position: | chr2:32389345-32389672 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 179 |
| Conread position: | 89-342 |
| Cow position: | chr2:47603889-47603640 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 188 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 48, 104 |
| Conread position: | 94-313 |
| Cow position: | chr2:67419729-67419505 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 0 |
| Conread position: | 99-470 |
| Cow position: | chr2:1490668-1490297 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 82 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 102-322 |
| Cow position: | chr2:5474094-5474319 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 0 |
| Conread position: | 102-368 |
| Cow position: | chr2:28616627-28616359 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 64 |
| Conread position: | 106-317 |
| Cow position: | chr2:2088591-2088375 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 126 |
| Conread position: | 132-322 |
| Cow position: | chr2:54737118-54737311 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 158 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 153, 24 |
| Conread position: | 170-322 |
| Cow position: | chr2:49590047-49590204 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 184-469 |
| Cow position: | chr2:41149652-41149941 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 104, 79 |
| Conread position: | 201-324 |
| Cow position: | chr2:1490299-1490171 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 208-317 |
| Cow position: | chr2:57588381-57588494 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 77, 32 |
| Conread position: | 240-503 |
| Cow position: | chr2:15062344-15062082 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 10, 129 |
| Conread position: | 251-441 |
| Cow position: | chr2:24393442-24393251 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 40, 133 |
| Conread position: | 352-565 |
| Cow position: | chr2:5485452-5485245 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 58, 53 |
Show alignments to all cow chromosomes.