Cow genome map

Conread name: Ss1.1-rpigcf0_018239.5

Conread position: 1-151
Cow position:
Alignm length: 158
Alignm identity: 125
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 32, 0

Conread position: 1-283
Cow position:
Alignm length: 289
Alignm identity: 202
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 32, 68

Conread position: 1-289
Cow position:
Alignm length: 291
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 139

Conread position: 1-289
Cow position:
Alignm length: 294
Alignm identity: 202
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 9, 145

Conread position: 1-317
Cow position:
Alignm length: 328
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 1-324
Cow position:
Alignm length: 335
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 1-324
Cow position:
Alignm length: 331
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 1-330
Cow position:
Alignm length: 338
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 94

Conread position: 1-334
Cow position:
Alignm length: 346
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 20

Conread position: 1-334
Cow position:
Alignm length: 346
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 103

Conread position: 1-337
Cow position:
Alignm length: 345
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 296

Conread position: 1-342
Cow position:
Alignm length: 358
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-342
Cow position:
Alignm length: 371
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 228

Conread position: 1-342
Cow position:
Alignm length: 360
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 285

Conread position: 1-348
Cow position:
Alignm length: 359
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 149

Conread position: 1-352
Cow position:
Alignm length: 365
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 241

Conread position: 1-358
Cow position:
Alignm length: 371
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 132

Conread position: 1-374
Cow position:
Alignm length: 383
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 173

Conread position: 1-392
Cow position:
Alignm length: 407
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 195

Conread position: 1-405
Cow position:
Alignm length: 413
Alignm identity: 277
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 164, 68

Conread position: 2-201
Cow position:
Alignm length: 200
Alignm identity: 155
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 9, 0

Conread position: 2-317
Cow position:
Alignm length: 321
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 9

Conread position: 2-322
Cow position:
Alignm length: 326
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 9

Conread position: 2-327
Cow position:
Alignm length: 332
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 9

Conread position: 2-348
Cow position:
Alignm length: 353
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 9

Conread position: 3-335
Cow position:
Alignm length: 335
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 16

Conread position: 3-348
Cow position:
Alignm length: 358
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 335

Conread position: 3-565
Cow position:
Alignm length: 578
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 36

Conread position: 4-317
Cow position:
Alignm length: 328
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 62

Conread position: 5-334
Cow position:
Alignm length: 338
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 312

Conread position: 7-318
Cow position:
Alignm length: 315
Alignm identity: 214
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 159, 24

Conread position: 7-393
Cow position:
Alignm length: 397
Alignm identity: 271
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 54, 153

Conread position: 8-342
Cow position:
Alignm length: 342
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 0

Conread position: 10-342
Cow position:
Alignm length: 341
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 184

Conread position: 12-271
Cow position:
Alignm length: 262
Alignm identity: 184
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 36, 177

Conread position: 12-324
Cow position:
Alignm length: 317
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 73

Conread position: 17-324
Cow position:
Alignm length: 313
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 125

Conread position: 17-337
Cow position:
Alignm length: 328
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 241

Conread position: 17-348
Cow position:
Alignm length: 337
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 0

Conread position: 17-348
Cow position:
Alignm length: 338
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 71

Conread position: 18-405
Cow position:
Alignm length: 395
Alignm identity: 264
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 48, 73

Conread position: 20-281
Cow position:
Alignm length: 267
Alignm identity: 184
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 106, 45

Conread position: 21-280
Cow position:
Alignm length: 262
Alignm identity: 186
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 15, 41

Conread position: 21-321
Cow position:
Alignm length: 310
Alignm identity: 214
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 26, 55

Conread position: 22-343
Cow position:
Alignm length: 331
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 111

Conread position: 26-406
Cow position:
Alignm length: 387
Alignm identity: 259
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 255, 37

Conread position: 27-358
Cow position:
Alignm length: 339
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 194

Conread position: 30-289
Cow position:
Alignm length: 261
Alignm identity: 171
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 184, 29

Conread position: 56-279
Cow position:
Alignm length: 230
Alignm identity: 158
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 17

Conread position: 63-389
Cow position:
Alignm length: 335
Alignm identity: 226
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 227, 68

Conread position: 75-264
Cow position:
Alignm length: 191
Alignm identity: 144
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 91, 126

Conread position: 78-326
Cow position:
Alignm length: 256
Alignm identity: 189
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 93, 10

Conread position: 110-343
Cow position:
Alignm length: 244
Alignm identity: 169
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 11, 35

Conread position: 115-343
Cow position:
Alignm length: 236
Alignm identity: 180
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 175, 12

Conread position: 161-345
Cow position:
Alignm length: 195
Alignm identity: 142
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 67, 105

Conread position: 196-322
Cow position:
Alignm length: 132
Alignm identity: 110
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 89, 0

Show alignments to all cow chromosomes.