Cow genome map

Conread name: Ss1.1-rpigcf0_018239.5

Conread position: 1-226
Cow position:
Alignm length: 227
Alignm identity: 159
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 32, 51

Conread position: 1-229
Cow position:
Alignm length: 229
Alignm identity: 163
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 35, 0

Conread position: 1-267
Cow position:
Alignm length: 268
Alignm identity: 179
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 157, 77

Conread position: 1-270
Cow position:
Alignm length: 270
Alignm identity: 174
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 123, 0

Conread position: 1-274
Cow position:
Alignm length: 280
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 1-289
Cow position:
Alignm length: 295
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 1-289
Cow position:
Alignm length: 295
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 1-317
Cow position:
Alignm length: 329
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 94

Conread position: 1-317
Cow position:
Alignm length: 328
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 1-317
Cow position:
Alignm length: 328
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 1-317
Cow position:
Alignm length: 329
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 138

Conread position: 1-317
Cow position:
Alignm length: 328
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 1-322
Cow position:
Alignm length: 332
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 96

Conread position: 1-324
Cow position:
Alignm length: 335
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-324
Cow position:
Alignm length: 335
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 72

Conread position: 1-334
Cow position:
Alignm length: 347
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 338

Conread position: 1-334
Cow position:
Alignm length: 345
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 135

Conread position: 1-339
Cow position:
Alignm length: 348
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 69

Conread position: 1-342
Cow position:
Alignm length: 352
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 1-348
Cow position:
Alignm length: 360
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 102

Conread position: 1-348
Cow position:
Alignm length: 355
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 50

Conread position: 1-350
Cow position:
Alignm length: 371
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 269

Conread position: 1-358
Cow position:
Alignm length: 372
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 78

Conread position: 1-358
Cow position:
Alignm length: 373
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 75

Conread position: 1-358
Cow position:
Alignm length: 369
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 94

Conread position: 1-405
Cow position:
Alignm length: 406
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 337, 20

Conread position: 2-317
Cow position:
Alignm length: 321
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 9

Conread position: 3-405
Cow position:
Alignm length: 417
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 167

Conread position: 9-327
Cow position:
Alignm length: 329
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 0

Conread position: 12-289
Cow position:
Alignm length: 280
Alignm identity: 193
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 245, 70

Conread position: 17-178
Cow position:
Alignm length: 162
Alignm identity: 124
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 71, 0

Conread position: 17-289
Cow position:
Alignm length: 273
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 18-290
Cow position:
Alignm length: 278
Alignm identity: 185
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 76, 117

Conread position: 20-234
Cow position:
Alignm length: 217
Alignm identity: 149
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 158, 24

Conread position: 21-279
Cow position:
Alignm length: 262
Alignm identity: 191
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 192, 45

Conread position: 21-364
Cow position:
Alignm length: 352
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 11

Conread position: 21-405
Cow position:
Alignm length: 392
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 67

Conread position: 22-405
Cow position:
Alignm length: 390
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 212

Conread position: 22-406
Cow position:
Alignm length: 390
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 131

Conread position: 26-268
Cow position:
Alignm length: 246
Alignm identity: 174
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 129, 34

Conread position: 27-180
Cow position:
Alignm length: 155
Alignm identity: 112
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 150, 0

Conread position: 27-343
Cow position:
Alignm length: 325
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 62

Conread position: 51-324
Cow position:
Alignm length: 279
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 194

Conread position: 56-289
Cow position:
Alignm length: 238
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 41

Conread position: 56-343
Cow position:
Alignm length: 295
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 35

Conread position: 66-289
Cow position:
Alignm length: 227
Alignm identity: 170
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 12, 142

Conread position: 71-320
Cow position:
Alignm length: 256
Alignm identity: 182
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 16, 68

Conread position: 93-425
Cow position:
Alignm length: 340
Alignm identity: 233
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 195, 40

Conread position: 177-322
Cow position:
Alignm length: 151
Alignm identity: 122
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 108, 0

Conread position: 177-324
Cow position:
Alignm length: 153
Alignm identity: 123
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 113, 130

Show alignments to all cow chromosomes.