Cow genome map

Conread name: Ss1.1-rpigcf0_018239.5

Conread position: 1-317
Cow position: chr26:30782738-30783065 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-321
Cow position: chr26:12656289-12656598 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 36

Conread position: 1-322
Cow position: chr26:12588569-12588238 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 264

Conread position: 1-327
Cow position: chr26:8918846-8919181 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 65

Conread position: 1-334
Cow position: chr26:12574401-12574069 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 38

Conread position: 1-348
Cow position: chr26:19351519-19351161 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 2-317
Cow position: chr26:2352353-2352038 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 13

Conread position: 2-317
Cow position: chr26:8869882-8870204 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 9

Conread position: 2-317
Cow position: chr26:15144755-15144438 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 9

Conread position: 2-317
Cow position: chr26:18852225-18852541 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 9

Conread position: 2-317
Cow position: chr26:18855094-18855410 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 9

Conread position: 2-322
Cow position: chr26:11254051-11253729 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 9

Conread position: 2-333
Cow position: chr26:3691803-3692130 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 19

Conread position: 10-321
Cow position: chr26:9563347-9563031 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 146

Conread position: 12-317
Cow position: chr26:3030817-3030507 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 0

Conread position: 12-393
Cow position: chr26:11285901-11286283 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 251
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 279, 109

Conread position: 17-289
Cow position: chr26:30589360-30589083 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 240

Conread position: 17-322
Cow position: chr26:5675176-5675486 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 0

Conread position: 17-324
Cow position: chr26:9112755-9113068 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 0

Conread position: 17-348
Cow position: chr26:17396914-17396578 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 0

Conread position: 18-286
Cow position: chr26:23603748-23603481 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 21-576
Cow position: chr26:9845555-9845017 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 22-401
Cow position: chr26:12666129-12666508 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 19

Conread position: 23-410
Cow position: chr26:9849900-9849510 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 16

Conread position: 23-410
Cow position: chr26:9853410-9853021 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 16

Conread position: 26-282
Cow position: chr26:20262887-20263132 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 185
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 112, 53

Conread position: 27-165
Cow position: chr26:5551802-5551939 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 51, 39

Conread position: 27-275
Cow position: chr26:17996971-17996725 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 170
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 214, 140

Conread position: 27-317
Cow position: chr26:2198655-2198948 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 36

Conread position: 27-324
Cow position: chr26:1602177-1601864 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 216
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 29, 78

Conread position: 29-393
Cow position: chr26:8283032-8282663 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 188

Conread position: 30-193
Cow position: chr26:20255081-20255247 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 78, 0

Conread position: 34-317
Cow position: chr26:4806507-4806239 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 213
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 251, 129

Conread position: 36-253
Cow position: chr26:4334181-4334398 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 42-324
Cow position: chr26:6849394-6849108 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 56

Conread position: 82-265
Cow position: chr26:23043220-23043403 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 96-229
Cow position: chr26:16904866-16905001 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 81, 0

Show alignments to all cow chromosomes.