Cow genome map
| Conread name: | Ss1.1-rpigcf0_018239.5 |
| Conread position: | 1-163 |
| Cow position: | chr3:14634251-14634084 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 32, 56 |
| Conread position: | 1-244 |
| Cow position: | chr3:38866258-38866504 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 90 |
| Conread position: | 1-251 |
| Cow position: | chr3:17775956-17776201 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 186 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 7, 93 |
| Conread position: | 1-273 |
| Cow position: | chr3:57500920-57500651 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 164, 30 |
| Conread position: | 1-289 |
| Cow position: | chr3:2711100-2710808 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 172 |
| Conread position: | 1-289 |
| Cow position: | chr3:5883401-5883693 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 127 |
| Conread position: | 1-289 |
| Cow position: | chr3:19757099-19756805 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-289 |
| Cow position: | chr3:30929520-30929796 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 192, 85 |
| Conread position: | 1-289 |
| Cow position: | chr3:53515478-53515767 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 17 |
| Conread position: | 1-297 |
| Cow position: | chr3:10239509-10239810 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 93 |
| Conread position: | 1-317 |
| Cow position: | chr3:7158871-7158546 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 171 |
| Conread position: | 1-317 |
| Cow position: | chr3:7168656-7168979 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 136 |
| Conread position: | 1-317 |
| Cow position: | chr3:45032601-45032928 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 1-317 |
| Cow position: | chr3:56321177-56321502 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 64 |
| Conread position: | 1-317 |
| Cow position: | chr3:64650492-64650813 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 259, 36 |
| Conread position: | 1-317 |
| Cow position: | chr3:66891101-66890776 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 172 |
| Conread position: | 1-319 |
| Cow position: | chr3:16727063-16726749 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 210 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 226, 70 |
| Conread position: | 1-322 |
| Cow position: | chr3:24314339-24314661 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 67 |
| Conread position: | 1-322 |
| Cow position: | chr3:59861226-59861558 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-323 |
| Cow position: | chr3:5995836-5995504 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 93 |
| Conread position: | 1-324 |
| Cow position: | chr3:207302-206967 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 1-324 |
| Cow position: | chr3:594439-594770 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-324 |
| Cow position: | chr3:2633785-2634114 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 263 |
| Conread position: | 1-324 |
| Cow position: | chr3:2653966-2654296 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 264 |
| Conread position: | 1-324 |
| Cow position: | chr3:49137680-49137344 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 94 |
| Conread position: | 1-324 |
| Cow position: | chr3:57499658-57499352 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 232 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 29, 119 |
| Conread position: | 1-324 |
| Cow position: | chr3:77474620-77474956 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 1-327 |
| Cow position: | chr3:14439900-14439565 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 328 |
| Conread position: | 1-327 |
| Cow position: | chr3:64028225-64027889 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 162 |
| Conread position: | 1-333 |
| Cow position: | chr3:5829768-5829427 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 208 |
| Conread position: | 1-333 |
| Cow position: | chr3:70083785-70083464 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 101 |
| Conread position: | 1-334 |
| Cow position: | chr3:9716674-9717015 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 251 |
| Conread position: | 1-336 |
| Cow position: | chr3:47081798-47081452 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 1-336 |
| Cow position: | chr3:54785626-54785962 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 241 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 36, 146 |
| Conread position: | 1-337 |
| Cow position: | chr3:18463725-18463382 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 102 |
| Conread position: | 1-339 |
| Cow position: | chr3:36882058-36881718 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 90 |
| Conread position: | 1-340 |
| Cow position: | chr3:19722755-19722411 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 285, 133 |
| Conread position: | 1-340 |
| Cow position: | chr3:58947317-58947665 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 313 |
| Conread position: | 1-342 |
| Cow position: | chr3:57484867-57484516 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 126 |
| Conread position: | 1-342 |
| Cow position: | chr3:64017505-64017151 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-342 |
| Cow position: | chr3:72629929-72630284 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-342 |
| Cow position: | chr3:75041306-75040955 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 78 |
| Conread position: | 1-343 |
| Cow position: | chr3:19943921-19944258 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 50 |
| Conread position: | 1-343 |
| Cow position: | chr3:42432091-42432443 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 338 |
| Conread position: | 1-343 |
| Cow position: | chr3:42580105-42579756 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 71 |
| Conread position: | 1-344 |
| Cow position: | chr3:26949373-26949728 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 171 |
| Conread position: | 1-348 |
| Cow position: | chr3:48060970-48060614 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 97 |
| Conread position: | 1-348 |
| Cow position: | chr3:66620039-66620390 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 90 |
| Conread position: | 1-348 |
| Cow position: | chr3:69933254-69933612 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-348 |
| Cow position: | chr3:78027550-78027192 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-358 |
| Cow position: | chr3:23214201-23213828 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 118 |
| Conread position: | 1-358 |
| Cow position: | chr3:55229836-55229471 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 70 |
| Conread position: | 1-358 |
| Cow position: | chr3:66638600-66638970 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-364 |
| Cow position: | chr3:63241883-63241542 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 9, 102 |
| Conread position: | 1-370 |
| Cow position: | chr3:3054459-3054833 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 80 |
| Conread position: | 1-372 |
| Cow position: | chr3:4285746-4286123 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 1-382 |
| Cow position: | chr3:32842570-32842198 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 263 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 39, 68 |
| Conread position: | 1-382 |
| Cow position: | chr3:60210317-60209935 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 267 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 23, 204 |
| Conread position: | 1-388 |
| Cow position: | chr3:13518421-13518044 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 186 |
| Conread position: | 1-401 |
| Cow position: | chr3:3980250-3980660 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 200 |
| Conread position: | 1-410 |
| Cow position: | chr3:34093586-34093166 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 193 |
| Conread position: | 1-424 |
| Cow position: | chr3:56340567-56340129 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 344 |
| Conread position: | 1-511 |
| Cow position: | chr3:6685321-6685827 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 236 |
| Conread position: | 1-522 |
| Cow position: | chr3:19802520-19803041 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 96 |
| Conread position: | 1-560 |
| Cow position: | chr3:52864613-52864039 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 363 |
| Conread position: | 1-564 |
| Cow position: | chr3:64358307-64357737 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 134 |
| Conread position: | 1-565 |
| Cow position: | chr3:66990661-66991193 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 332, 36 |
| Conread position: | 2-186 |
| Cow position: | chr3:37968949-37969130 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 2-238 |
| Cow position: | chr3:57856607-57856840 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 2-281 |
| Cow position: | chr3:30790356-30790081 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 2-284 |
| Cow position: | chr3:15989165-15988878 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 9 |
| Conread position: | 2-317 |
| Cow position: | chr3:2917331-2917648 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 9 |
| Conread position: | 2-317 |
| Cow position: | chr3:6782258-6782571 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 16 |
| Conread position: | 2-317 |
| Cow position: | chr3:18859290-18859601 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 258, 13 |
| Conread position: | 2-317 |
| Cow position: | chr3:19878532-19878845 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 9 |
| Conread position: | 2-317 |
| Cow position: | chr3:22335763-22336075 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 286, 10 |
| Conread position: | 2-317 |
| Cow position: | chr3:32623152-32622850 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 13 |
| Conread position: | 2-317 |
| Cow position: | chr3:41211867-41211550 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 13 |
| Conread position: | 2-317 |
| Cow position: | chr3:46861433-46861116 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 13 |
| Conread position: | 2-317 |
| Cow position: | chr3:49614107-49613790 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 9 |
| Conread position: | 2-334 |
| Cow position: | chr3:66119516-66119860 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 2-337 |
| Cow position: | chr3:40823248-40823589 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 94 |
| Conread position: | 3-289 |
| Cow position: | chr3:50915167-50915460 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 3-322 |
| Cow position: | chr3:3806206-3806519 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 221 |
| Conread position: | 3-324 |
| Cow position: | chr3:26822631-26822315 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 112 |
| Conread position: | 3-341 |
| Cow position: | chr3:472394-472747 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 3-343 |
| Cow position: | chr3:51940554-51940211 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 76 |
| Conread position: | 3-358 |
| Cow position: | chr3:31898114-31897747 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 70 |
| Conread position: | 4-324 |
| Cow position: | chr3:45974368-45974691 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 286, 8 |
| Conread position: | 4-340 |
| Cow position: | chr3:50128018-50127671 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 274 |
| Conread position: | 4-540 |
| Cow position: | chr3:29595059-29595602 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 136 |
| Conread position: | 5-228 |
| Cow position: | chr3:46678041-46677821 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 5-254 |
| Cow position: | chr3:17828776-17828530 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 5-257 |
| Cow position: | chr3:32146218-32145970 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 5-322 |
| Cow position: | chr3:47179330-47179011 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 6 |
| Conread position: | 5-343 |
| Cow position: | chr3:49677651-49678000 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 137 |
| Conread position: | 6-324 |
| Cow position: | chr3:45895688-45895364 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 7-233 |
| Cow position: | chr3:54864831-54864600 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 7-273 |
| Cow position: | chr3:29327114-29326842 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 30, 230 |
| Conread position: | 7-324 |
| Cow position: | chr3:31354392-31354071 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 56 |
| Conread position: | 7-398 |
| Cow position: | chr3:21305303-21304910 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 14 |
| Conread position: | 8-165 |
| Cow position: | chr3:80871768-80871925 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-358 |
| Cow position: | chr3:5047317-5046971 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 274 |
| Conread position: | 8-426 |
| Cow position: | chr3:39326591-39327012 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 10 |
| Conread position: | 9-565 |
| Cow position: | chr3:24591770-24591215 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 322 |
| Conread position: | 12-342 |
| Cow position: | chr3:49545331-49544992 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 17-282 |
| Cow position: | chr3:23291524-23291256 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 111 |
| Conread position: | 17-289 |
| Cow position: | chr3:30314448-30314720 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 17-322 |
| Cow position: | chr3:36117558-36117855 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 268, 127 |
| Conread position: | 17-332 |
| Cow position: | chr3:18811386-18811703 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 274, 53 |
| Conread position: | 17-348 |
| Cow position: | chr3:18542526-18542190 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 0 |
| Conread position: | 17-348 |
| Cow position: | chr3:21182802-21182469 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 219 |
| Conread position: | 17-426 |
| Cow position: | chr3:34031016-34030595 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 127 |
| Conread position: | 18-406 |
| Cow position: | chr3:14754415-14754022 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 300 |
| Conread position: | 20-212 |
| Cow position: | chr3:49276232-49276044 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 20-320 |
| Cow position: | chr3:18729254-18728950 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 19 |
| Conread position: | 20-326 |
| Cow position: | chr3:16866896-16866577 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 34, 29 |
| Conread position: | 20-376 |
| Cow position: | chr3:28929752-28929396 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 231 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 271, 40 |
| Conread position: | 21-202 |
| Cow position: | chr3:21945521-21945342 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 25, 112 |
| Conread position: | 21-286 |
| Cow position: | chr3:18357001-18356737 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 259, 0 |
| Conread position: | 21-322 |
| Cow position: | chr3:60083742-60083443 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 51, 46 |
| Conread position: | 21-360 |
| Cow position: | chr3:17936178-17935834 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 130, 113 |
| Conread position: | 21-361 |
| Cow position: | chr3:32618031-32617694 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 233 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 260, 38 |
| Conread position: | 21-374 |
| Cow position: | chr3:15178197-15178556 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 9 |
| Conread position: | 21-401 |
| Cow position: | chr3:4027157-4027545 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 21-405 |
| Cow position: | chr3:45775202-45774823 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 263 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 249, 143 |
| Conread position: | 21-426 |
| Cow position: | chr3:2908468-2908071 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 10 |
| Conread position: | 23-390 |
| Cow position: | chr3:16073031-16073386 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 250 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 276, 13 |
| Conread position: | 26-347 |
| Cow position: | chr3:53410808-53411123 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 228 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 144, 34 |
| Conread position: | 26-406 |
| Cow position: | chr3:56097420-56097794 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 83 |
| Conread position: | 27-234 |
| Cow position: | chr3:43039813-43039607 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 168 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 27-289 |
| Cow position: | chr3:56396006-56396267 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 39, 65 |
| Conread position: | 27-319 |
| Cow position: | chr3:3522913-3523210 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 258, 0 |
| Conread position: | 27-324 |
| Cow position: | chr3:83234232-83233935 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 231, 33 |
| Conread position: | 27-342 |
| Cow position: | chr3:5954294-5953972 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 62 |
| Conread position: | 27-343 |
| Cow position: | chr3:45869325-45869002 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 263, 228 |
| Conread position: | 27-358 |
| Cow position: | chr3:40157613-40157281 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 270, 130 |
| Conread position: | 27-394 |
| Cow position: | chr3:42630907-42631277 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 248 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 238, 104 |
| Conread position: | 27-401 |
| Cow position: | chr3:49333280-49333654 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 252 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 20, 12 |
| Conread position: | 27-539 |
| Cow position: | chr3:48231107-48230603 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 39 |
| Conread position: | 31-403 |
| Cow position: | chr3:54783437-54783819 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 29 |
| Conread position: | 33-398 |
| Cow position: | chr3:19891082-19890721 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 252 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 255, 88 |
| Conread position: | 34-317 |
| Cow position: | chr3:68873848-68873568 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 251, 41 |
| Conread position: | 34-322 |
| Cow position: | chr3:68700070-68699781 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 251, 156 |
| Conread position: | 42-399 |
| Cow position: | chr3:49162604-49162962 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 254 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 16, 9 |
| Conread position: | 51-406 |
| Cow position: | chr3:77442800-77443151 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 233 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 207, 76 |
| Conread position: | 55-229 |
| Cow position: | chr3:42445161-42444990 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 164, 83 |
| Conread position: | 55-340 |
| Cow position: | chr3:77423601-77423882 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 235, 108 |
| Conread position: | 56-289 |
| Cow position: | chr3:6660147-6660375 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 56-393 |
| Cow position: | chr3:42688518-42688861 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 117, 177 |
| Conread position: | 61-376 |
| Cow position: | chr3:36127317-36127636 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 300 |
| Conread position: | 66-270 |
| Cow position: | chr3:24642724-24642927 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 107, 16 |
| Conread position: | 66-320 |
| Cow position: | chr3:12680478-12680237 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 215, 42 |
| Conread position: | 75-327 |
| Cow position: | chr3:36864419-36864161 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 0 |
| Conread position: | 87-287 |
| Cow position: | chr3:82541369-82541572 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 53, 149 |
| Conread position: | 89-317 |
| Cow position: | chr3:19938839-19939071 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 151 |
| Conread position: | 89-352 |
| Cow position: | chr3:34396127-34395859 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 0 |
| Conread position: | 114-289 |
| Cow position: | chr3:75203303-75203479 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 128-359 |
| Cow position: | chr3:49601943-49601717 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 152, 28 |
| Conread position: | 137-374 |
| Cow position: | chr3:26837760-26837522 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 153, 41 |
| Conread position: | 142-539 |
| Cow position: | chr3:63004726-63004336 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 169 |
| Conread position: | 147-341 |
| Cow position: | chr3:29331265-29331065 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 165 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 153-342 |
| Cow position: | chr3:7481217-7481018 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 157-483 |
| Cow position: | chr3:14632676-14632349 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 110 |
| Conread position: | 165-323 |
| Cow position: | chr3:53713078-53713241 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 177-317 |
| Cow position: | chr3:40340070-40339925 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 108, 0 |
Show alignments to all cow chromosomes.