Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-rpigcf0_020383.5.5
        

               Conread position:
               83-501
               

               Cow position:
               chr17:2177262-2177679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               282
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               26, 50
               

               Conread position:
               95-465
               

               Cow position:
               chr17:453137-453496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               254
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               12, 98
               

               Conread position:
               96-490
               

               Cow position:
               chr17:41014458-41014854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 9
               

               Conread position:
               96-526
               

               Cow position:
               chr17:10843569-10844003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 71
               

               Conread position:
               98-492
               

               Cow position:
               chr17:11913439-11913053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               352, 11
               

               Conread position:
               99-332
               

               Cow position:
               chr17:22028776-22029006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               8, 51
               

               Conread position:
               99-368
               

               Cow position:
               chr17:18340168-18339903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               23, 10
               

               Conread position:
               99-446
               

               Cow position:
               chr17:2839329-2839678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               246
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               50, 10
               

               Conread position:
               99-448
               

               Cow position:
               chr17:22774152-22773804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 10
               

               Conread position:
               99-457
               

               Cow position:
               chr17:16216740-16217091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               242
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               119, 14
               

               Conread position:
               99-489
               

               Cow position:
               chr17:40802058-40802456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 10
               

               Conread position:
               99-490
               

               Cow position:
               chr17:22500697-22501072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               257
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               13, 24
               

               Conread position:
               99-494
               

               Cow position:
               chr17:38501-38881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               271
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               274, 30
               

               Conread position:
               99-501
               

               Cow position:
               chr17:148217-148615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 33
               

               Conread position:
               99-501
               

               Cow position:
               chr17:4107755-4107360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 10
               

               Conread position:
               99-501
               

               Cow position:
               chr17:8212367-8212761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 10
               

               Conread position:
               99-501
               

               Cow position:
               chr17:15439102-15439497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 10
               

               Conread position:
               99-501
               

               Cow position:
               chr17:20361494-20361100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 10
               

               Conread position:
               99-501
               

               Cow position:
               chr17:23884497-23884110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               273
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               18, 25
               

               Conread position:
               99-501
               

               Cow position:
               chr17:26829433-26829039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 15
               

               Conread position:
               99-501
               

               Cow position:
               chr17:27791481-27791088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 10
               

               Conread position:
               99-501
               

               Cow position:
               chr17:29824649-29824253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 10
               

               Conread position:
               99-504
               

               Cow position:
               chr17:18885073-18884666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 92
               

               Conread position:
               99-506
               

               Cow position:
               chr17:7699699-7700099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               287
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               13, 28
               

               Conread position:
               99-525
               

               Cow position:
               chr17:22563455-22563869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 10
               

               Conread position:
               99-542
               

               Cow position:
               chr17:35247237-35246806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               283
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               55, 89
               

               Conread position:
               100-447
               

               Cow position:
               chr17:17383422-17383766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               21, 9
               

               Conread position:
               100-501
               

               Cow position:
               chr17:4480572-4480176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 38
               

               Conread position:
               101-322
               

               Cow position:
               chr17:20404992-20405204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               101-404
               

               Cow position:
               chr17:6841886-6842196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 6
               

               Conread position:
               101-424
               

               Cow position:
               chr17:40282310-40282626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 8
               

               Conread position:
               101-462
               

               Cow position:
               chr17:34848187-34847846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               253
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               23, 6
               

               Conread position:
               101-496
               

               Cow position:
               chr17:20215387-20215782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 6
               

               Conread position:
               101-501
               

               Cow position:
               chr17:16447178-16446775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 92
               

               Conread position:
               101-524
               

               Cow position:
               chr17:20807779-20808207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 6
               

               Conread position:
               101-524
               

               Cow position:
               chr17:31427047-31427458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 6
               

               Conread position:
               101-525
               

               Cow position:
               chr17:7615377-7614968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 6
               

               Conread position:
               101-526
               

               Cow position:
               chr17:13716993-13716577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               349, 6
               

               Conread position:
               101-536
               

               Cow position:
               chr17:13935842-13935427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 91
               

               Conread position:
               103-526
               

               Cow position:
               chr17:11767427-11767849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 22
               

               Conread position:
               104-501
               

               Cow position:
               chr17:4123493-4123096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 89
               

               Conread position:
               105-339
               

               Cow position:
               chr17:25739603-25739840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               17, 86
               

               Conread position:
               105-471
               

               Cow position:
               chr17:20078368-20078004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 84
               

               Conread position:
               105-481
               

               Cow position:
               chr17:2151464-2151828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               262
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               328, 28
               

               Conread position:
               105-491
               

               Cow position:
               chr17:39484817-39485198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               256
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               15, 57
               

               Conread position:
               105-496
               

               Cow position:
               chr17:15854042-15854451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               279
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               19, 76
               

               Conread position:
               105-501
               

               Cow position:
               chr17:3197323-3196930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 88
               

               Conread position:
               105-501
               

               Cow position:
               chr17:16903886-16904285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 88
               

               Conread position:
               105-502
               

               Cow position:
               chr17:16854790-16854400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 56
               

               Conread position:
               105-542
               

               Cow position:
               chr17:15687488-15687912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 26
               

               Conread position:
               106-380
               

               Cow position:
               chr17:14006722-14006993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               28, 55
               

               Conread position:
               106-415
               

               Cow position:
               chr17:18591718-18592020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               125, 50
               

               Conread position:
               106-486
               

               Cow position:
               chr17:18198696-18199074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 52
               

               Conread position:
               106-487
               

               Cow position:
               chr17:18265166-18264789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               251
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               21, 86
               

               Conread position:
               106-492
               

               Cow position:
               chr17:20093852-20093476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               262
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               36, 82
               

               Conread position:
               106-495
               

               Cow position:
               chr17:16198151-16198530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               241
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               20, 40
               

               Conread position:
               106-497
               

               Cow position:
               chr17:21216982-21216599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               257
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               10, 26
               

               Conread position:
               106-501
               

               Cow position:
               chr17:30762-31149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               259
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               43, 19
               

               Conread position:
               106-501
               

               Cow position:
               chr17:731190-730792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 87
               

               Conread position:
               106-501
               

               Cow position:
               chr17:43991792-43992191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 59
               

               Conread position:
               106-502
               

               Cow position:
               chr17:16118157-16117774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               260
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               342, 81
               

               Conread position:
               108-531
               

               Cow position:
               chr17:41704644-41704228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               267
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               36, 16
               

               Conread position:
               108-537
               

               Cow position:
               chr17:4676715-4677125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               291
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               17, 98
               

               Conread position:
               109-392
               

               Cow position:
               chr17:28862531-28862249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               205
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               15, 24
               

               Conread position:
               109-452
               

               Cow position:
               chr17:13921547-13921885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               235
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               40, 7
               

               Conread position:
               109-476
               

               Cow position:
               chr17:3096476-3096836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               238
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               37, 51
               

               Conread position:
               109-506
               

               Cow position:
               chr17:32070221-32070627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               273
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               28, 15
               

               Conread position:
               111-456
               

               Cow position:
               chr17:1784248-1783903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               11, 37
               

               Conread position:
               111-526
               

               Cow position:
               chr17:6995562-6995970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 7
               

               Conread position:
               112-485
               

               Cow position:
               chr17:17453335-17452972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 30
               

               Conread position:
               112-501
               

               Cow position:
               chr17:15351372-15351757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               269
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               10, 79
               

               Conread position:
               113-449
               

               Cow position:
               chr17:33934493-33934165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               234
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               18, 33
               

               Conread position:
               113-501
               

               Cow position:
               chr17:21767222-21767598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               256
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               36, 69
               

               Conread position:
               116-308
               

               Cow position:
               chr17:11033876-11034064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               99, 31
               

               Conread position:
               116-457
               

               Cow position:
               chr17:2534229-2534567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               231
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               33, 72
               

               Conread position:
               116-519
               

               Cow position:
               chr17:38876776-38877155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               274
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               334, 29
               

               Conread position:
               118-445
               

               Cow position:
               chr17:21860492-21860167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               16, 76
               

               Conread position:
               118-499
               

               Cow position:
               chr17:43460607-43460232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               18, 30
               

               Conread position:
               118-501
               

               Cow position:
               chr17:34317434-34317061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 29
               

               Conread position:
               119-501
               

               Cow position:
               chr17:29950828-29951208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 71
               

               Conread position:
               120-501
               

               Cow position:
               chr17:15328608-15328985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 40
               

               Conread position:
               121-308
               

               Cow position:
               chr17:24312453-24312636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               28, 40
               

               Conread position:
               121-368
               

               Cow position:
               chr17:254421-254668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               165
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               28, 67
               

               Conread position:
               121-409
               

               Cow position:
               chr17:7560375-7560104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               23, 38
               

               Conread position:
               121-445
               

               Cow position:
               chr17:20209547-20209224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 67
               

               Conread position:
               121-448
               

               Cow position:
               chr17:922950-923274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               121-456
               

               Cow position:
               chr17:1654436-1654098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               236
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               28, 35
               

               Conread position:
               121-482
               

               Cow position:
               chr17:33792405-33792768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 68
               

               Conread position:
               121-488
               

               Cow position:
               chr17:14243154-14243526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               121-489
               

               Cow position:
               chr17:31781153-31780782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 68
               

               Conread position:
               121-491
               

               Cow position:
               chr17:15228500-15228134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               253
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               28, 38
               

               Conread position:
               121-492
               

               Cow position:
               chr17:18814484-18814844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               314, 36
               

               Conread position:
               121-493
               

               Cow position:
               chr17:24502835-24503205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 39
               

               Conread position:
               121-501
               

               Cow position:
               chr17:932711-933091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 36
               

               Conread position:
               121-501
               

               Cow position:
               chr17:979857-979478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 69
               

               Conread position:
               121-501
               

               Cow position:
               chr17:997848-997487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 67
               

               Conread position:
               121-501
               

               Cow position:
               chr17:6263182-6263564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 67
               

               Conread position:
               121-501
               

               Cow position:
               chr17:8223033-8223410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 67
               

               Conread position:
               121-501
               

               Cow position:
               chr17:11083807-11083433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 67
               

               Conread position:
               121-501
               

               Cow position:
               chr17:13725590-13725968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 67
               

               Conread position:
               121-501
               

               Cow position:
               chr17:17221640-17222001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               266
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               89, 20
               

               Conread position:
               121-501
               

               Cow position:
               chr17:21666327-21666706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 67
               

               Conread position:
               121-501
               

               Cow position:
               chr17:24026657-24026278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 67
               

               Conread position:
               121-501
               

               Cow position:
               chr17:29471758-29472138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 67
               

               Conread position:
               121-502
               

               Cow position:
               chr17:2201625-2202005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 67
               

               Conread position:
               121-503
               

               Cow position:
               chr17:36790394-36790767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               259
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               28, 61
               

               Conread position:
               121-505
               

               Cow position:
               chr17:18099746-18099365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 67
               

               Conread position:
               121-519
               

               Cow position:
               chr17:36817194-36817583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 67
               

               Conread position:
               121-526
               

               Cow position:
               chr17:15721920-15722310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               283
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               42, 20
               

               Conread position:
               121-528
               

               Cow position:
               chr17:20508259-20507858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 15
               

               Conread position:
               121-534
               

               Cow position:
               chr17:12477196-12477602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 69
               

               Conread position:
               121-542
               

               Cow position:
               chr17:21066170-21065751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               289
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               23, 38
               

               Conread position:
               122-345
               

               Cow position:
               chr17:3315418-3315628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               27, 66
               

               Conread position:
               122-422
               

               Cow position:
               chr17:8351836-8352127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               215
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               122-451
               

               Cow position:
               chr17:29212955-29213278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 37
               

               Conread position:
               122-501
               

               Cow position:
               chr17:39823860-39823487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               306, 14
               

               Conread position:
               122-526
               

               Cow position:
               chr17:241611-242019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 70
               

               Conread position:
               122-526
               

               Cow position:
               chr17:15701374-15700976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               244, 12
               

               Conread position:
               123-445
               

               Cow position:
               chr17:29078945-29079261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               228
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               11, 61
               

               Conread position:
               124-298
               

               Cow position:
               chr17:25567529-25567701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               20, 35
               

               Conread position:
               124-298
               

               Cow position:
               chr17:41120963-41120783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               12, 36
               

               Conread position:
               124-321
               

               Cow position:
               chr17:27052739-27052938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               25, 64
               

               Conread position:
               124-337
               

               Cow position:
               chr17:3049634-3049840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               124-342
               

               Cow position:
               chr17:21373366-21373574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               25, 64
               

               Conread position:
               124-368
               

               Cow position:
               chr17:40908565-40908325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               14, 27
               

               Conread position:
               124-422
               

               Cow position:
               chr17:26629935-26629642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               15, 65
               

               Conread position:
               124-447
               

               Cow position:
               chr17:39209427-39209108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 36
               

               Conread position:
               124-448
               

               Cow position:
               chr17:8450041-8450365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               227
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               13, 51
               

               Conread position:
               124-470
               

               Cow position:
               chr17:2078969-2079311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               256
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               194, 23
               

               Conread position:
               124-478
               

               Cow position:
               chr17:20174979-20175327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               194, 24
               

               Conread position:
               124-501
               

               Cow position:
               chr17:15558903-15559279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 24
               

               Conread position:
               124-501
               

               Cow position:
               chr17:16505416-16505039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 64
               

               Conread position:
               124-501
               

               Cow position:
               chr17:17957928-17958303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 63
               

               Conread position:
               124-501
               

               Cow position:
               chr17:20225933-20226308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 24
               

               Conread position:
               124-501
               

               Cow position:
               chr17:28024554-28024185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 23
               

               Conread position:
               124-501
               

               Cow position:
               chr17:36284598-36284974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 24
               

               Conread position:
               124-502
               

               Cow position:
               chr17:7802523-7802153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               258
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               324, 23
               

               Conread position:
               124-502
               

               Cow position:
               chr17:39747978-39748349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               263
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               190, 10
               

               Conread position:
               124-504
               

               Cow position:
               chr17:8996100-8995729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               261
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               25, 47
               

               Conread position:
               124-507
               

               Cow position:
               chr17:12132679-12132305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 41
               

               Conread position:
               124-534
               

               Cow position:
               chr17:19405975-19405566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 54
               

               Conread position:
               125-338
               

               Cow position:
               chr17:2244740-2244530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               21, 34
               

               Conread position:
               125-350
               

               Cow position:
               chr17:5672183-5671965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               125-373
               

               Cow position:
               chr17:33999814-33999571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               223, 27
               

               Conread position:
               125-421
               

               Cow position:
               chr17:15809319-15809614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 64
               

               Conread position:
               125-460
               

               Cow position:
               chr17:21716799-21717128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 11
               

               Conread position:
               125-484
               

               Cow position:
               chr17:36265942-36265594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               247
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               88, 25
               

               Conread position:
               125-500
               

               Cow position:
               chr17:19215079-19214704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 64
               

               Conread position:
               125-501
               

               Cow position:
               chr17:184479-184853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 63
               

               Conread position:
               125-501
               

               Cow position:
               chr17:400278-399908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 11
               

               Conread position:
               125-501
               

               Cow position:
               chr17:1708425-1708047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 75
               

               Conread position:
               125-501
               

               Cow position:
               chr17:1970488-1970861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 11
               

               Conread position:
               125-501
               

               Cow position:
               chr17:3131340-3131717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 49
               

               Conread position:
               125-501
               

               Cow position:
               chr17:3652390-3652020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 11
               

               Conread position:
               125-501
               

               Cow position:
               chr17:4063663-4064032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               261
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               24, 92
               

               Conread position:
               125-501
               

               Cow position:
               chr17:5638555-5638185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 11
               

               Conread position:
               125-501
               

               Cow position:
               chr17:5806152-5805784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               125-501
               

               Cow position:
               chr17:6071873-6072234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               258
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               81, 48
               

               Conread position:
               125-501
               

               Cow position:
               chr17:6123115-6123490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 63
               

               Conread position:
               125-501
               

               Cow position:
               chr17:6612359-6612729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 11
               

               Conread position:
               125-501
               

               Cow position:
               chr17:6955976-6956346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 11
               

               Conread position:
               125-501
               

               Cow position:
               chr17:11786262-11786630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 11
               

               Conread position:
               125-501
               

               Cow position:
               chr17:15094125-15093755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 11
               

               Conread position:
               125-501
               

               Cow position:
               chr17:15118149-15118523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 34
               

               Conread position:
               125-501
               

               Cow position:
               chr17:16700140-16699770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 11
               

               Conread position:
               125-501
               

               Cow position:
               chr17:20391111-20391481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 11
               

               Conread position:
               125-501
               

               Cow position:
               chr17:21181824-21182194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 11
               

               Conread position:
               125-501
               

               Cow position:
               chr17:23321088-23320715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 63
               

               Conread position:
               125-501
               

               Cow position:
               chr17:25834754-25835124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 11
               

               Conread position:
               125-501
               

               Cow position:
               chr17:29075043-29074685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 22
               

               Conread position:
               125-501
               

               Cow position:
               chr17:31671563-31671193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 11
               

               Conread position:
               125-501
               

               Cow position:
               chr17:33272381-33272006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               167, 75
               

               Conread position:
               125-501
               

               Cow position:
               chr17:34235914-34235543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               309, 11
               

               Conread position:
               125-501
               

               Cow position:
               chr17:34564683-34565053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 11
               

               Conread position:
               125-506
               

               Cow position:
               chr17:18777500-18777123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 35
               

               Conread position:
               125-525
               

               Cow position:
               chr17:17478453-17478850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 16
               

               Conread position:
               125-536
               

               Cow position:
               chr17:13916509-13916124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 64
               

               Conread position:
               126-337
               

               Cow position:
               chr17:44222566-44222772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               20, 34
               

               Conread position:
               126-339
               

               Cow position:
               chr17:42352564-42352358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               80, 61
               

               Conread position:
               126-393
               

               Cow position:
               chr17:9753118-9753370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               19, 41
               

               Conread position:
               126-446
               

               Cow position:
               chr17:37580255-37579939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               11, 39
               

               Conread position:
               126-467
               

               Cow position:
               chr17:16896328-16895997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               11, 25
               

               Conread position:
               126-496
               

               Cow position:
               chr17:4183381-4183753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               264
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               23, 62
               

               Conread position:
               126-499
               

               Cow position:
               chr17:38788966-38788587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               260
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               23, 63
               

               Conread position:
               126-499
               

               Cow position:
               chr17:38800208-38799829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               23, 63
               

               Conread position:
               126-501
               

               Cow position:
               chr17:1568888-1568513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 33
               

               Conread position:
               126-507
               

               Cow position:
               chr17:16463827-16463452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 15
               

               Conread position:
               126-516
               

               Cow position:
               chr17:34980618-34981000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               255
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               10, 58
               

               Conread position:
               126-521
               

               Cow position:
               chr17:27324547-27324158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               305, 37
               

               Conread position:
               126-524
               

               Cow position:
               chr17:10285561-10285147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               283
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               14, 63
               

               Conread position:
               126-529
               

               Cow position:
               chr17:6079252-6079677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               289
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               22, 33
               

               Conread position:
               128-499
               

               Cow position:
               chr17:1104813-1105180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 62
               

               Conread position:
               128-502
               

               Cow position:
               chr17:2081289-2081657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 13
               

               Conread position:
               129-382
               

               Cow position:
               chr17:1312168-1312415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               20, 59
               

               Conread position:
               129-467
               

               Cow position:
               chr17:5380288-5380611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               321, 5
               

               Conread position:
               129-500
               

               Cow position:
               chr17:27628443-27628075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               246
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               199, 6
               

               Conread position:
               129-516
               

               Cow position:
               chr17:13849545-13849917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               248
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               302, 22
               

               Conread position:
               129-524
               

               Cow position:
               chr17:21481529-21481917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               258
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               321, 12
               

               Conread position:
               129-525
               

               Cow position:
               chr17:40393315-40393704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 30
               

               Conread position:
               129-526
               

               Cow position:
               chr17:27978445-27978832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               191, 18
               

               Conread position:
               130-339
               

               Cow position:
               chr17:3549925-3549728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               130-453
               

               Cow position:
               chr17:29156716-29157036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               224
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               12, 71
               

               Conread position:
               130-532
               

               Cow position:
               chr17:4304427-4304813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               265
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               86, 46
               

               Conread position:
               131-288
               

               Cow position:
               chr17:43444395-43444242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               46, 57
               

               Conread position:
               131-305
               

               Cow position:
               chr17:22134536-22134705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               131-339
               

               Cow position:
               chr17:18721302-18721101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               82, 56
               

               Conread position:
               131-465
               

               Cow position:
               chr17:8067932-8067597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 61
               

               Conread position:
               131-492
               

               Cow position:
               chr17:2033836-2034192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               245, 56
               

               Conread position:
               131-492
               

               Cow position:
               chr17:36747182-36746823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               196, 56
               

               Conread position:
               131-501
               

               Cow position:
               chr17:8205272-8205638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 29
               

               Conread position:
               131-501
               

               Cow position:
               chr17:12290127-12289763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               258
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               71, 56
               

               Conread position:
               131-501
               

               Cow position:
               chr17:36788598-36788257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               318, 27
               

               Conread position:
               131-502
               

               Cow position:
               chr17:32028835-32028475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               261
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               164, 5
               

               Conread position:
               131-509
               

               Cow position:
               chr17:9229928-9229556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               16, 5
               

               Conread position:
               131-511
               

               Cow position:
               chr17:41113707-41113336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               81, 14
               

               Conread position:
               131-525
               

               Cow position:
               chr17:28447518-28447913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               276
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               177, 32
               

               Conread position:
               131-534
               

               Cow position:
               chr17:20695523-20695916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 14
               

               Conread position:
               133-492
               

               Cow position:
               chr17:11385797-11386163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 12
               

               Conread position:
               133-519
               

               Cow position:
               chr17:2179173-2179544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               258
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               134-309
               

               Cow position:
               chr17:24785534-24785704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               115, 12
               

               Conread position:
               134-455
               

               Cow position:
               chr17:14232259-14231953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               214
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               72, 11
               

               Conread position:
               134-501
               

               Cow position:
               chr17:2265532-2265895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               294, 11
               

               Conread position:
               134-501
               

               Cow position:
               chr17:7396945-7396587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               294, 16
               

               Conread position:
               134-501
               

               Cow position:
               chr17:8993996-8993634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 11
               

               Conread position:
               134-501
               

               Cow position:
               chr17:20546481-20546844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               294, 11
               

               Conread position:
               134-501
               

               Cow position:
               chr17:22248908-22248546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               294, 16
               

               Conread position:
               134-501
               

               Cow position:
               chr17:31986857-31986494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               294, 11
               

               Conread position:
               134-506
               

               Cow position:
               chr17:38758916-38758566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               236
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               365, 13
               

               Conread position:
               134-507
               

               Cow position:
               chr17:38992096-38992466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               290, 11
               

               Conread position:
               134-507
               

               Cow position:
               chr17:43471247-43470877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               294, 11
               

               Conread position:
               136-368
               

               Cow position:
               chr17:28886304-28886535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               13, 52
               

               Conread position:
               136-423
               

               Cow position:
               chr17:588698-588421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               70, 49
               

               Conread position:
               136-501
               

               Cow position:
               chr17:16869952-16869612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               254
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               184, 22
               

               Conread position:
               136-501
               

               Cow position:
               chr17:24031148-24031504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               248
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               98, 11
               

               Conread position:
               136-504
               

               Cow position:
               chr17:19998439-19998795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               259, 51
               

               Conread position:
               136-529
               

               Cow position:
               chr17:41919323-41919727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               279
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               189, 28
               

               Conread position:
               136-531
               

               Cow position:
               chr17:32457110-32456718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 22
               

               Conread position:
               136-533
               

               Cow position:
               chr17:2088260-2088642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               257, 22
               

               Conread position:
               136-539
               

               Cow position:
               chr17:13688863-13688461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               277
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               47, 11
               

               Conread position:
               136-579
               

               Cow position:
               chr17:144869-144432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               301
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               70, 9
               

               Conread position:
               137-501
               

               Cow position:
               chr17:35437388-35437750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               291, 50
               

               Conread position:
               137-507
               

               Cow position:
               chr17:14212674-14212307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               291, 21
               

               Conread position:
               137-531
               

               Cow position:
               chr17:40105362-40104991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               264
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               72, 30
               

               Conread position:
               138-333
               

               Cow position:
               chr17:15335106-15334917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               138-409
               

               Cow position:
               chr17:5390748-5390479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               81, 9
               

               Conread position:
               138-501
               

               Cow position:
               chr17:50756-50408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               247
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               138-531
               

               Cow position:
               chr17:23663112-23663491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               254
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               18, 55
               

               Conread position:
               139-497
               

               Cow position:
               chr17:42168664-42169008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               162, 6
               

               Conread position:
               139-501
               

               Cow position:
               chr17:10445506-10445860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               311, 11
               

               Conread position:
               140-507
               

               Cow position:
               chr17:24618127-24618489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 17
               

               Conread position:
               141-426
               

               Cow position:
               chr17:11382451-11382168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               8, 47
               

               Conread position:
               141-456
               

               Cow position:
               chr17:4211282-4211591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               309, 17
               

               Conread position:
               141-463
               

               Cow position:
               chr17:39611906-39612220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               216, 17
               

               Conread position:
               141-494
               

               Cow position:
               chr17:3305935-3306284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               309, 17
               

               Conread position:
               141-531
               

               Cow position:
               chr17:31949193-31948810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               269
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               197, 32
               

               Conread position:
               141-547
               

               Cow position:
               chr17:28359125-28359525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 47
               

               Conread position:
               142-501
               

               Cow position:
               chr17:138968-139322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 44
               

               Conread position:
               143-426
               

               Cow position:
               chr17:15374734-15375001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               145-309
               

               Cow position:
               chr17:20359935-20360095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               5, 39
               

               Conread position:
               145-501
               

               Cow position:
               chr17:12856603-12856958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 13
               

               Conread position:
               147-399
               

               Cow position:
               chr17:12357720-12357473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               147-449
               

               Cow position:
               chr17:40818579-40818895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               214
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               96, 46
               

               Conread position:
               147-532
               

               Cow position:
               chr17:23786090-23785735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               257
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               303, 16
               

               Conread position:
               150-501
               

               Cow position:
               chr17:4152908-4152567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               278, 8
               

               Conread position:
               152-502
               

               Cow position:
               chr17:17240654-17240307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 26
               

               Conread position:
               152-504
               

               Cow position:
               chr17:36313347-36313701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               281, 35
               

               Conread position:
               152-504
               

               Cow position:
               chr17:36317401-36317756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               281, 35
               

               Conread position:
               152-525
               

               Cow position:
               chr17:14304392-14304026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 35
               

               Conread position:
               153-506
               

               Cow position:
               chr17:5748488-5748146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 17
               

               Conread position:
               155-506
               

               Cow position:
               chr17:24293471-24293806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               337, 32
               

               Conread position:
               156-463
               

               Cow position:
               chr17:2868492-2868187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               12, 32
               

               Conread position:
               156-502
               

               Cow position:
               chr17:418287-417953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               242
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               57, 31
               

               Conread position:
               157-344
               

               Cow position:
               chr17:43144404-43144226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               87, 19
               

               Conread position:
               157-425
               

               Cow position:
               chr17:6872842-6872589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               49, 30
               

               Conread position:
               157-501
               

               Cow position:
               chr17:33289332-33288998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               158-436
               

               Cow position:
               chr17:43826889-43826617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               158-487
               

               Cow position:
               chr17:43527296-43527623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 29
               

               Conread position:
               158-501
               

               Cow position:
               chr17:11677871-11677530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               270, 29
               

               Conread position:
               158-501
               

               Cow position:
               chr17:29079713-29080031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               168, 29
               

               Conread position:
               158-501
               

               Cow position:
               chr17:40811086-40811423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               288, 18
               

               Conread position:
               158-502
               

               Cow position:
               chr17:5899204-5898869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               169, 34
               

               Conread position:
               158-507
               

               Cow position:
               chr17:6081858-6082210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 29
               

               Conread position:
               158-526
               

               Cow position:
               chr17:26476472-26476826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               252
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               165, 29
               

               Conread position:
               158-550
               

               Cow position:
               chr17:22774705-22775087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 29
               

               Conread position:
               158-638
               

               Cow position:
               chr17:18472545-18473020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               490
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               277, 29
               

               Conread position:
               159-463
               

               Cow position:
               chr17:23722976-23723270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               161, 28
               

               Conread position:
               159-501
               

               Cow position:
               chr17:2006017-2006349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               291, 28
               

               Conread position:
               159-501
               

               Cow position:
               chr17:13424623-13424965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 28
               

               Conread position:
               159-501
               

               Cow position:
               chr17:17133838-17134176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               274, 28
               

               Conread position:
               159-547
               

               Cow position:
               chr17:41893013-41892647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               160-457
               

               Cow position:
               chr17:5042818-5042530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               169, 27
               

               Conread position:
               160-501
               

               Cow position:
               chr17:20233563-20233883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 27
               

               Conread position:
               161-525
               

               Cow position:
               chr17:44233765-44233403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               243
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               289, 26
               

               Conread position:
               164-501
               

               Cow position:
               chr17:2584024-2584357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               282, 23
               

               Conread position:
               166-525
               

               Cow position:
               chr17:28539366-28539717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 7
               

               Conread position:
               167-457
               

               Cow position:
               chr17:36281509-36281798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               41, 20
               

               Conread position:
               168-486
               

               Cow position:
               chr17:42663206-42662892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 18
               

               Conread position:
               169-323
               

               Cow position:
               chr17:41759290-41759438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               170-425
               

               Cow position:
               chr17:20084443-20084202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               36, 17
               

               Conread position:
               172-525
               

               Cow position:
               chr17:38363949-38363585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 15
               

               Conread position:
               173-425
               

               Cow position:
               chr17:31099230-31099483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               185
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               178-501
               

               Cow position:
               chr17:158660-158980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               230
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               33, 40
               

               Conread position:
               185-501
               

               Cow position:
               chr17:36220895-36221204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 105
               

               Conread position:
               192-492
               

               Cow position:
               chr17:23146834-23147130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               224, 43
               

               Conread position:
               192-494
               

               Cow position:
               chr17:29083561-29083854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               227, 0
               

               Conread position:
               192-501
               

               Cow position:
               chr17:13708095-13708399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               222
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               42, 14
               

               Conread position:
               192-509
               

               Cow position:
               chr17:24334036-24334352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 45
               

               Conread position:
               192-567
               

               Cow position:
               chr17:8229692-8230065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 177
               

               Conread position:
               193-324
               

               Cow position:
               chr17:2588433-2588568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               103
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               193-325
               

               Cow position:
               chr17:12743367-12743498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               193-408
               

               Cow position:
               chr17:7142026-7142246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               18, 114
               

               Conread position:
               193-460
               

               Cow position:
               chr17:13967167-13966895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               193-482
               

               Cow position:
               chr17:3155594-3155300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               193-482
               

               Cow position:
               chr17:8125544-8125264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               253, 11
               

               Conread position:
               193-491
               

               Cow position:
               chr17:23337666-23337368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               16, 144
               

               Conread position:
               193-510
               

               Cow position:
               chr17:18201120-18201442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               231
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               25, 60
               

               Conread position:
               197-518
               

               Cow position:
               chr17:30413355-30413677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 56
               

               Conread position:
               197-547
               

               Cow position:
               chr17:35180149-35180498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 245
               

               Conread position:
               198-334
               

               Cow position:
               chr17:19235158-19235294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               17, 53
               

               Conread position:
               198-466
               

               Cow position:
               chr17:8280129-8280388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               15, 86
               

               Conread position:
               198-583
               

               Cow position:
               chr17:5997744-5997372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               258
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               16, 124
               

               Conread position:
               199-494
               

               Cow position:
               chr17:40771178-40771474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               204
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               251, 0
               

               Conread position:
               200-461
               

               Cow position:
               chr17:20814724-20814985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               235, 169
               

               Conread position:
               200-500
               

               Cow position:
               chr17:25077467-25077170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               216
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               127, 107
               

               Conread position:
               200-501
               

               Cow position:
               chr17:13458544-13458238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               200-501
               

               Cow position:
               chr17:28155954-28155652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               228, 0
               

               Conread position:
               200-501
               

               Cow position:
               chr17:43539408-43539710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               228, 0
               

               Conread position:
               200-520
               

               Cow position:
               chr17:6155388-6155711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               233, 228
               

               Conread position:
               200-539
               

               Cow position:
               chr17:20591565-20591908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               233
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               31, 169
               

               Conread position:
               202-501
               

               Cow position:
               chr17:907707-908005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               248, 152
               

               Conread position:
               203-502
               

               Cow position:
               chr17:36504668-36504370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               12, 100
               

               Conread position:
               203-534
               

               Cow position:
               chr17:31310875-31310546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               225
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               115, 283
               

               Conread position:
               207-324
               

               Cow position:
               chr17:8213480-8213597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               207-465
               

               Cow position:
               chr17:2698940-2699197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               190
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               27, 103
               

               Conread position:
               207-492
               

               Cow position:
               chr17:11638253-11638534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               209
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               74, 46
               

               Conread position:
               207-501
               

               Cow position:
               chr17:5549139-5548844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 0
               

               Conread position:
               207-501
               

               Cow position:
               chr17:26803453-26803160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               243, 140
               

               Conread position:
               207-501
               

               Cow position:
               chr17:31232582-31232284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 168
               

               Conread position:
               207-502
               

               Cow position:
               chr17:1280704-1280999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               208
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               142, 151
               

               Conread position:
               207-502
               

               Cow position:
               chr17:9905757-9906052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               240, 277
               

               Conread position:
               207-506
               

               Cow position:
               chr17:3201291-3201008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               197
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               188, 70
               

               Conread position:
               207-548
               

               Cow position:
               chr17:11941790-11942128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               76, 89
               

               Conread position:
               208-347
               

               Cow position:
               chr17:17086648-17086515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               208-491
               

               Cow position:
               chr17:37018742-37019023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               83, 114
               

               Conread position:
               214-501
               

               Cow position:
               chr17:39844049-39844337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               214, 0
               

               Conread position:
               214-501
               

               Cow position:
               chr17:44029961-44030249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               206
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               67, 82
               

               Conread position:
               215-502
               

               Cow position:
               chr17:18828722-18828435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               231, 223
               

               Conread position:
               215-532
               

               Cow position:
               chr17:2142723-2143041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               218
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               103, 56
               

               Conread position:
               216-501
               

               Cow position:
               chr17:42843422-42843708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               212, 0
               

               Conread position:
               217-457
               

               Cow position:
               chr17:3499576-3499335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               182
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               132, 154
               

               Conread position:
               217-492
               

               Cow position:
               chr17:24534425-24534700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               233, 140
               

               Conread position:
               217-497
               

               Cow position:
               chr17:21973758-21973479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               201
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               177, 40
               

               Conread position:
               217-500
               

               Cow position:
               chr17:35620090-35619803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               231, 58
               

               Conread position:
               217-501
               

               Cow position:
               chr17:23101833-23101551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               233, 83
               

               Conread position:
               217-501
               

               Cow position:
               chr17:34208742-34208459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               218-501
               

               Cow position:
               chr17:5695565-5695287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 31
               

               Conread position:
               218-526
               

               Cow position:
               chr17:21646430-21646121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               222
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               223, 36
               

               Conread position:
               219-528
               

               Cow position:
               chr17:15190767-15190483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               215
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               231, 32
               

               Conread position:
               220-569
               

               Cow position:
               chr17:29041367-29041018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 213
               

               Conread position:
               223-501
               

               Cow position:
               chr17:4940376-4940108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               209
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               178, 56
               

               Conread position:
               224-483
               

               Cow position:
               chr17:44862435-44862169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               99, 210
               

               Conread position:
               224-492
               

               Cow position:
               chr17:2270144-2270410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               207, 24
               

               Conread position:
               224-500
               

               Cow position:
               chr17:28407901-28407637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               149, 95
               

               Conread position:
               224-500
               

               Cow position:
               chr17:40085454-40085729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               199
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               224, 123
               

               Conread position:
               224-501
               

               Cow position:
               chr17:17128541-17128802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               224-501
               

               Cow position:
               chr17:17259657-17259934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 10
               

               Conread position:
               224-501
               

               Cow position:
               chr17:29404872-29405142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               103, 53
               

               Conread position:
               224-502
               

               Cow position:
               chr17:27679874-27679598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               201
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               226, 29
               

               Conread position:
               224-502
               

               Cow position:
               chr17:40852993-40853261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               224-521
               

               Cow position:
               chr17:11654590-11654875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               217
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               225, 10
               

               Conread position:
               224-534
               

               Cow position:
               chr17:13237345-13237038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               287, 229
               

               Conread position:
               225-335
               

               Cow position:
               chr17:3388126-3388235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               225-489
               

               Cow position:
               chr17:38829458-38829729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               63, 9
               

               Conread position:
               225-501
               

               Cow position:
               chr17:20232352-20232075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               203, 0
               

               Conread position:
               226-345
               

               Cow position:
               chr17:2485859-2485740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               226-494
               

               Cow position:
               chr17:29898012-29898276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 99
               

               Conread position:
               226-506
               

               Cow position:
               chr17:18595355-18595634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               23, 8
               

               Conread position:
               227-494
               

               Cow position:
               chr17:24823646-24823914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 131
               

               Conread position:
               227-501
               

               Cow position:
               chr17:13144293-13144026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               149, 105
               

               Conread position:
               227-503
               

               Cow position:
               chr17:20847921-20848194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 87
               

               Conread position:
               227-535
               

               Cow position:
               chr17:27686065-27685759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 66
               

               Conread position:
               228-492
               

               Cow position:
               chr17:5767285-5767548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               49, 108
               

               Conread position:
               229-491
               

               Cow position:
               chr17:20358264-20358525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               220, 154
               

               Conread position:
               229-567
               

               Cow position:
               chr17:42382656-42382314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 104
               

               Conread position:
               230-470
               

               Cow position:
               chr17:14022030-14021790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               232-501
               

               Cow position:
               chr17:20779907-20780175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               218, 93
               

               Conread position:
               233-491
               

               Cow position:
               chr17:37415478-37415220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               192
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               210, 119
               

               Conread position:
               233-510
               

               Cow position:
               chr17:5522650-5522373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               132, 92
               

               Conread position:
               235-464
               

               Cow position:
               chr17:16416651-16416422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 153
               

               Conread position:
               235-487
               

               Cow position:
               chr17:18569508-18569255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               138, 50
               

               Conread position:
               237-501
               

               Cow position:
               chr17:17493733-17493997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               188
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               191, 147
               

               Conread position:
               238-500
               

               Cow position:
               chr17:18036580-18036317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               190, 163
               

               Conread position:
               239-491
               

               Cow position:
               chr17:32651010-32651262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               187
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               107, 14
               

               Conread position:
               239-493
               

               Cow position:
               chr17:5734043-5733784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               171, 86
               

               Conread position:
               240-501
               

               Cow position:
               chr17:1709788-1710050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               206, 0
               

               Conread position:
               241-501
               

               Cow position:
               chr17:9663307-9663046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               189
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               187, 0
               

               Conread position:
               241-525
               

               Cow position:
               chr17:20643112-20643382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               210
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               242-452
               

               Cow position:
               chr17:2657232-2657443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               186, 0
               

               Conread position:
               242-495
               

               Cow position:
               chr17:21175002-21174749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               42, 132
               

               Conread position:
               242-507
               

               Cow position:
               chr17:10494492-10494225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               193
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               186, 0
               

               Conread position:
               243-501
               

               Cow position:
               chr17:5896514-5896257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               190
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               106, 115
               

               Conread position:
               243-508
               

               Cow position:
               chr17:14051723-14051463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               207, 22
               

               Conread position:
               244-501
               

               Cow position:
               chr17:37528299-37528041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               188
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               184, 0
               

               Conread position:
               244-528
               

               Cow position:
               chr17:6967575-6967294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 54
               

               Conread position:
               244-532
               

               Cow position:
               chr17:41151146-41150859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               45, 76
               

               Conread position:
               246-501
               

               Cow position:
               chr17:14249633-14249378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               182, 17
               

               Conread position:
               247-492
               

               Cow position:
               chr17:25167701-25167948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               180
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               248-510
               

               Cow position:
               chr17:29110117-29109849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               249-419
               

               Cow position:
               chr17:3041681-3041850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               249-525
               

               Cow position:
               chr17:19889433-19889708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 120
               

               Conread position:
               250-501
               

               Cow position:
               chr17:20271946-20271700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               251-441
               

               Cow position:
               chr17:38985882-38985694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               182, 11
               

               Conread position:
               251-454
               

               Cow position:
               chr17:3765046-3764843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               153, 74
               

               Conread position:
               251-500
               

               Cow position:
               chr17:5211365-5211110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               175
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               251-503
               

               Cow position:
               chr17:28830695-28830941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               196, 129
               

               Conread position:
               252-456
               

               Cow position:
               chr17:14293262-14293068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               252-501
               

               Cow position:
               chr17:24553420-24553661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               86, 30
               

               Conread position:
               252-506
               

               Cow position:
               chr17:32531395-32531146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               174
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               206, 0
               

               Conread position:
               253-490
               

               Cow position:
               chr17:32977789-32977551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               71, 131
               

               Conread position:
               253-495
               

               Cow position:
               chr17:10270883-10271134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               184
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               145, 0
               

               Conread position:
               253-501
               

               Cow position:
               chr17:728876-728626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               187
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               90, 73
               

               Conread position:
               253-503
               

               Cow position:
               chr17:25542399-25542154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               188
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               190, 221
               

               Conread position:
               253-504
               

               Cow position:
               chr17:30727681-30727933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               197, 0
               

               Conread position:
               253-529
               

               Cow position:
               chr17:41024216-41024492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 107
               

               Conread position:
               254-528
               

               Cow position:
               chr17:31924364-31924091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               196, 53
               

               Conread position:
               255-501
               

               Cow position:
               chr17:15894896-15894651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               173, 68
               

               Conread position:
               255-506
               

               Cow position:
               chr17:35521612-35521361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               193, 129
               

               Conread position:
               255-525
               

               Cow position:
               chr17:39735593-39735860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               190
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               256-462
               

               Cow position:
               chr17:34886117-34885897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               67, 185
               

               Conread position:
               256-475
               

               Cow position:
               chr17:35037157-35037376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               192, 164
               

               Conread position:
               256-492
               

               Cow position:
               chr17:1884163-1884408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               73, 19
               

               Conread position:
               256-494
               

               Cow position:
               chr17:36331543-36331313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               120, 25
               

               Conread position:
               256-495
               

               Cow position:
               chr17:20082441-20082213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               177, 21
               

               Conread position:
               256-501
               

               Cow position:
               chr17:5281890-5281644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               172, 0
               

               Conread position:
               256-501
               

               Cow position:
               chr17:20800224-20800472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               187
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               71, 174
               

               Conread position:
               256-506
               

               Cow position:
               chr17:9660868-9660619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               192, 228
               

               Conread position:
               256-506
               

               Cow position:
               chr17:32293339-32293089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               78, 69
               

               Conread position:
               256-541
               

               Cow position:
               chr17:35998704-35998416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               197
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               192, 73
               

               Conread position:
               257-501
               

               Cow position:
               chr17:6623095-6623340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               182
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               178, 171
               

               Conread position:
               257-509
               

               Cow position:
               chr17:14027967-14027712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               70, 215
               

               Conread position:
               258-500
               

               Cow position:
               chr17:18123128-18122885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               188, 0
               

               Conread position:
               258-501
               

               Cow position:
               chr17:1456828-1456584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               71, 138
               

               Conread position:
               258-501
               

               Cow position:
               chr17:34191520-34191276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               177
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               170, 0
               

               Conread position:
               259-501
               

               Cow position:
               chr17:21115793-21115548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               182
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               19, 156
               

               Conread position:
               259-503
               

               Cow position:
               chr17:6565892-6566137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               184
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               19, 6
               

               Conread position:
               260-501
               

               Cow position:
               chr17:4635194-4634950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               260-501
               

               Cow position:
               chr17:43726097-43725856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               168, 83
               

               Conread position:
               261-501
               

               Cow position:
               chr17:4457698-4457946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               262-447
               

               Cow position:
               chr17:17179468-17179654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               262-500
               

               Cow position:
               chr17:3269735-3269966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               68, 32
               

               Conread position:
               264-501
               

               Cow position:
               chr17:13940899-13940664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               50, 46
               

               Conread position:
               265-457
               

               Cow position:
               chr17:10420836-10420646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               138, 24
               

               Conread position:
               266-452
               

               Cow position:
               chr17:14034240-14034054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               266-501
               

               Cow position:
               chr17:24549591-24549825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               177, 88
               

               Conread position:
               267-449
               

               Cow position:
               chr17:21807398-21807222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               109, 72
               

               Conread position:
               267-501
               

               Cow position:
               chr17:33059136-33058902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               170
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               270-488
               

               Cow position:
               chr17:40879242-40879464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               270-501
               

               Cow position:
               chr17:18242412-18242635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               158, 38
               

               Conread position:
               271-472
               

               Cow position:
               chr17:25188712-25188917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               88, 75
               

               Conread position:
               271-535
               

               Cow position:
               chr17:15187826-15187565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               193
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               179, 66
               

               Conread position:
               274-504
               

               Cow position:
               chr17:30664705-30664934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               176, 139
               

               Conread position:
               274-525
               

               Cow position:
               chr17:6848331-6848568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               77, 87
               

               Conread position:
               274-592
               

               Cow position:
               chr17:33535003-33534687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 25
               

               Conread position:
               275-526
               

               Cow position:
               chr17:24608251-24608499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               17, 62
               

               Conread position:
               276-492
               

               Cow position:
               chr17:8926800-8926588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               173, 13
               

               Conread position:
               276-501
               

               Cow position:
               chr17:19377670-19377444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               278-501
               

               Cow position:
               chr17:20129110-20129334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               40, 152
               

               Conread position:
               280-500
               

               Cow position:
               chr17:35287906-35287687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               280-501
               

               Cow position:
               chr17:29810086-29810308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               49, 149
               

               Conread position:
               280-571
               

               Cow position:
               chr17:24109745-24109456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               148, 257
               

               Conread position:
               286-494
               

               Cow position:
               chr17:38759310-38759104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               164, 100
               

               Conread position:
               286-507
               

               Cow position:
               chr17:18070200-18070427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               163, 224
               

               Conread position:
               287-490
               

               Cow position:
               chr17:4602098-4601897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               288-490
               

               Cow position:
               chr17:14088922-14088720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               22, 26
               

               Conread position:
               290-502
               

               Cow position:
               chr17:40741053-40741266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               143, 138
               

               Conread position:
               291-501
               

               Cow position:
               chr17:3862981-3862763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               68, 41
               

               Conread position:
               291-501
               

               Cow position:
               chr17:21874872-21874661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               291-530
               

               Cow position:
               chr17:12539608-12539372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               154, 40
               

               Conread position:
               292-500
               

               Cow position:
               chr17:20360220-20360430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               84, 9
               

               Conread position:
               293-481
               

               Cow position:
               chr17:42284352-42284167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               293-501
               

               Cow position:
               chr17:7584917-7585126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               293-536
               

               Cow position:
               chr17:13914267-13914498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               131, 21
               

               Conread position:
               296-460
               

               Cow position:
               chr17:11035144-11035306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               154, 36
               

               Conread position:
               296-500
               

               Cow position:
               chr17:8644393-8644608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               137, 75
               

               Conread position:
               296-501
               

               Cow position:
               chr17:17626888-17627089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               154, 36
               

               Conread position:
               297-529
               

               Cow position:
               chr17:3139270-3139499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               178
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               152, 14
               

               Conread position:
               300-525
               

               Cow position:
               chr17:16216468-16216240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               301-491
               

               Cow position:
               chr17:35388562-35388374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               149, 31
               

               Conread position:
               301-501
               

               Cow position:
               chr17:11471363-11471563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               301-501
               

               Cow position:
               chr17:24785840-24786041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               301-501
               

               Cow position:
               chr17:36197076-36197277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               302-441
               

               Cow position:
               chr17:26174066-26174204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               302-501
               

               Cow position:
               chr17:20269072-20269268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               148, 62
               

               Conread position:
               302-538
               

               Cow position:
               chr17:28467239-28467474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               27, 96
               

               Conread position:
               303-506
               

               Cow position:
               chr17:28046704-28046501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               145, 198
               

               Conread position:
               303-536
               

               Cow position:
               chr17:29833395-29833165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               6, 24
               

               Conread position:
               304-488
               

               Cow position:
               chr17:5554006-5553820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               304-492
               

               Cow position:
               chr17:12059633-12059445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               72, 28
               

               Conread position:
               304-501
               

               Cow position:
               chr17:10009106-10008908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               304-501
               

               Cow position:
               chr17:18564301-18564103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               305-531
               

               Cow position:
               chr17:35219875-35219646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               24, 128
               

               Conread position:
               306-532
               

               Cow position:
               chr17:18855971-18856193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               307-501
               

               Cow position:
               chr17:19317425-19317620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               307-501
               

               Cow position:
               chr17:31076842-31077037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               307-506
               

               Cow position:
               chr17:22995159-22994962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               307-512
               

               Cow position:
               chr17:20912065-20912271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               310-501
               

               Cow position:
               chr17:19266943-19266750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               313-494
               

               Cow position:
               chr17:12326404-12326221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               36, 58
               

               Conread position:
               313-501
               

               Cow position:
               chr17:8221831-8222019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               36, 54
               

               Conread position:
               313-534
               

               Cow position:
               chr17:24313170-24313392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               314-534
               

               Cow position:
               chr17:9819043-9818819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               15, 109
               

               Conread position:
               316-501
               

               Cow position:
               chr17:16875875-16876061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               316-501
               

               Cow position:
               chr17:22087143-22087329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               316-521
               

               Cow position:
               chr17:18863106-18863311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               317-501
               

               Cow position:
               chr17:8673580-8673765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               318-457
               

               Cow position:
               chr17:26078362-26078501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               319-492
               

               Cow position:
               chr17:18721099-18720929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               319-492
               

               Cow position:
               chr17:25740416-25740590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               112, 164
               

               Conread position:
               319-525
               

               Cow position:
               chr17:33370740-33370537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               116, 20
               

               Conread position:
               319-531
               

               Cow position:
               chr17:26465568-26465779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               131, 15
               

               Conread position:
               320-501
               

               Cow position:
               chr17:30539775-30539593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               321-501
               

               Cow position:
               chr17:3470906-3471087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               321-501
               

               Cow position:
               chr17:15334245-15334065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               38, 24
               

               Conread position:
               321-503
               

               Cow position:
               chr17:14026426-14026243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               107, 82
               

               Conread position:
               325-501
               

               Cow position:
               chr17:34391083-34390905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               11, 37
               

               Conread position:
               327-612
               

               Cow position:
               chr17:11587422-11587135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               75, 98
               

               Conread position:
               332-477
               

               Cow position:
               chr17:20091109-20090963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               44, 38
               

               Conread position:
               332-519
               

               Cow position:
               chr17:9748257-9748437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               332-544
               

               Cow position:
               chr17:37774080-37773869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               99, 191
               

               Conread position:
               334-501
               

               Cow position:
               chr17:8213776-8213944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               15, 24
               

               Conread position:
               334-501
               

               Cow position:
               chr17:32280385-32280220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               99, 49
               

               Conread position:
               334-504
               

               Cow position:
               chr17:3388351-3388519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               116, 52
               

               Conread position:
               334-538
               

               Cow position:
               chr17:31535083-31535284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               177, 85
               

               Conread position:
               335-525
               

               Cow position:
               chr17:11102301-11102109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               99, 162
               

               Conread position:
               337-488
               

               Cow position:
               chr17:21439376-21439528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               337-501
               

               Cow position:
               chr17:33040064-33039899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               337-547
               

               Cow position:
               chr17:41029439-41029644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               113, 17
               

               Conread position:
               338-501
               

               Cow position:
               chr17:21756459-21756298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               339-501
               

               Cow position:
               chr17:15992129-15992292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               346-500
               

               Cow position:
               chr17:3239463-3239619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               354-568
               

               Cow position:
               chr17:25140761-25140966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               96, 16
               

               Conread position:
               357-501
               

               Cow position:
               chr17:27986324-27986180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               93, 37
               

               Conread position:
               357-502
               

               Cow position:
               chr17:36959854-36960002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               110
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               358-501
               

               Cow position:
               chr17:39783482-39783623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               114, 8
               

               Conread position:
               359-500
               

               Cow position:
               chr17:26230452-26230594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               74, 69
               

               Conread position:
               360-488
               

               Cow position:
               chr17:12743511-12743640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               75, 68
               

               Conread position:
               360-491
               

               Cow position:
               chr17:9900642-9900774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               73, 66
               

               Conread position:
               360-501
               

               Cow position:
               chr17:10529231-10529088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               73, 68
               

               Conread position:
               360-501
               

               Cow position:
               chr17:13673916-13673776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               75, 61
               

               Conread position:
               360-501
               

               Cow position:
               chr17:19370893-19370751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               360-501
               

               Cow position:
               chr17:30712554-30712696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               360-501
               

               Cow position:
               chr17:35223063-35223205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               360-506
               

               Cow position:
               chr17:5361542-5361396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               69, 10
               

               Conread position:
               360-528
               

               Cow position:
               chr17:43144101-43143931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               33, 10
               

               Conread position:
               360-534
               

               Cow position:
               chr17:25341020-25340846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               360-547
               

               Cow position:
               chr17:13989725-13989543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               73, 48
               

               Conread position:
               362-501
               

               Cow position:
               chr17:11216365-11216223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               14, 67
               

               Conread position:
               364-501
               

               Cow position:
               chr17:5810088-5809950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               364-503
               

               Cow position:
               chr17:1061769-1061629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               71, 64
               

               Conread position:
               365-519
               

               Cow position:
               chr17:25755297-25755452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               70, 49
               

               Conread position:
               366-501
               

               Cow position:
               chr17:21362932-21363067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               84, 121
               

               Conread position:
               371-480
               

               Cow position:
               chr17:27053293-27053403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               371-530
               

               Cow position:
               chr17:11776295-11776457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               373-524
               

               Cow position:
               chr17:30410892-30410740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               5, 110
               

               Conread position:
               375-501
               

               Cow position:
               chr17:23245312-23245439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               58, 53
               

               Conread position:
               376-539
               

               Cow position:
               chr17:13508253-13508416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               44, 108
               

               Conread position:
               377-497
               

               Cow position:
               chr17:17120693-17120574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               379-491
               

               Cow position:
               chr17:21730357-21730467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               71, 49
               

               Conread position:
               380-534
               

               Cow position:
               chr17:43464982-43465137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               40, 76
               

               Conread position:
               386-500
               

               Cow position:
               chr17:12220564-12220678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               64, 25
               

               Conread position:
               386-501
               

               Cow position:
               chr17:21038822-21038937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               49, 30
               

               Conread position:
               386-568
               

               Cow position:
               chr17:35021144-35020965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               65, 148
               

               Conread position:
               391-494
               

               Cow position:
               chr17:17683804-17683701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               85
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               414-534
               

               Cow position:
               chr17:43471966-43471845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               21, 14
               
Show alignments to all cow chromosomes.
Conread position:	83-501
Cow position:	chr17:2177262-2177679 (view UCSC Genome Browser custom track)
Alignm length:	426
Alignm identity:	282
Alignm E-value:	2.94273e-44
Alignm gaps (pig, cow):	26, 50
Conread position:	95-465
Cow position:	chr17:453137-453496 (view UCSC Genome Browser custom track)
Alignm length:	378
Alignm identity:	254
Alignm E-value:	4e-36
Alignm gaps (pig, cow):	12, 98
Conread position:	96-490
Cow position:	chr17:41014458-41014854 (view UCSC Genome Browser custom track)
Alignm length:	406
Alignm identity:	292
Alignm E-value:	0
Alignm gaps (pig, cow):	28, 9
Conread position:	96-526
Cow position:	chr17:10843569-10844003 (view UCSC Genome Browser custom track)
Alignm length:	444
Alignm identity:	308
Alignm E-value:	0
Alignm gaps (pig, cow):	17, 71
Conread position:	98-492
Cow position:	chr17:11913439-11913053 (view UCSC Genome Browser custom track)
Alignm length:	396
Alignm identity:	281
Alignm E-value:	0
Alignm gaps (pig, cow):	352, 11
Conread position:	99-332
Cow position:	chr17:22028776-22029006 (view UCSC Genome Browser custom track)
Alignm length:	237
Alignm identity:	168
Alignm E-value:	2e-30
Alignm gaps (pig, cow):	8, 51
Conread position:	99-368
Cow position:	chr17:18340168-18339903 (view UCSC Genome Browser custom track)
Alignm length:	275
Alignm identity:	194
Alignm E-value:	3e-33
Alignm gaps (pig, cow):	23, 10
Conread position:	99-446
Cow position:	chr17:2839329-2839678 (view UCSC Genome Browser custom track)
Alignm length:	366
Alignm identity:	246
Alignm E-value:	6e-28
Alignm gaps (pig, cow):	50, 10
Conread position:	99-448
Cow position:	chr17:22774152-22773804 (view UCSC Genome Browser custom track)
Alignm length:	359
Alignm identity:	252
Alignm E-value:	0
Alignm gaps (pig, cow):	50, 10
Conread position:	99-457
Cow position:	chr17:16216740-16217091 (view UCSC Genome Browser custom track)
Alignm length:	365
Alignm identity:	242
Alignm E-value:	4e-34
Alignm gaps (pig, cow):	119, 14
Conread position:	99-489
Cow position:	chr17:40802058-40802456 (view UCSC Genome Browser custom track)
Alignm length:	409
Alignm identity:	285
Alignm E-value:	0
Alignm gaps (pig, cow):	52, 10
Conread position:	99-490
Cow position:	chr17:22500697-22501072 (view UCSC Genome Browser custom track)
Alignm length:	398
Alignm identity:	257
Alignm E-value:	5e-27
Alignm gaps (pig, cow):	13, 24
Conread position:	99-494
Cow position:	chr17:38501-38881 (view UCSC Genome Browser custom track)
Alignm length:	400
Alignm identity:	271
Alignm E-value:	8.99634e-43
Alignm gaps (pig, cow):	274, 30
Conread position:	99-501
Cow position:	chr17:148217-148615 (view UCSC Genome Browser custom track)
Alignm length:	406
Alignm identity:	290
Alignm E-value:	0
Alignm gaps (pig, cow):	15, 33
Conread position:	99-504
Cow position:	chr17:18885073-18884666 (view UCSC Genome Browser custom track)
Alignm length:	412
Alignm identity:	293
Alignm E-value:	0
Alignm gaps (pig, cow):	10, 92
Conread position:	99-506
Cow position:	chr17:7699699-7700099 (view UCSC Genome Browser custom track)
Alignm length:	422
Alignm identity:	287
Alignm E-value:	2e-38
Alignm gaps (pig, cow):	13, 28
Conread position:	99-525
Cow position:	chr17:22563455-22563869 (view UCSC Genome Browser custom track)
Alignm length:	432
Alignm identity:	294
Alignm E-value:	0
Alignm gaps (pig, cow):	50, 10
Conread position:	99-542
Cow position:	chr17:35247237-35246806 (view UCSC Genome Browser custom track)
Alignm length:	447
Alignm identity:	283
Alignm E-value:	4e-34
Alignm gaps (pig, cow):	55, 89
Conread position:	100-447
Cow position:	chr17:17383422-17383766 (view UCSC Genome Browser custom track)
Alignm length:	356
Alignm identity:	236
Alignm E-value:	3e-31
Alignm gaps (pig, cow):	21, 9
Conread position:	100-501
Cow position:	chr17:4480572-4480176 (view UCSC Genome Browser custom track)
Alignm length:	405
Alignm identity:	291
Alignm E-value:	0
Alignm gaps (pig, cow):	21, 38