Cow genome map


           Conread name:
           Ss1.1-rpigcf0_020383.5.5
        

               Conread position:
               73-501
               

               Cow position:
               chrX:6406569-6406987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 46
               

               Conread position:
               83-501
               

               Cow position:
               chrX:28633249-28632835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 12
               

               Conread position:
               90-508
               

               Cow position:
               chrX:7277171-7277579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 50
               

               Conread position:
               92-510
               

               Cow position:
               chrX:37781829-37781431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               233, 17
               

               Conread position:
               95-392
               

               Cow position:
               chrX:22963573-22963285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               164, 19
               

               Conread position:
               95-488
               

               Cow position:
               chrX:6870321-6869934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 8
               

               Conread position:
               95-501
               

               Cow position:
               chrX:35240099-35240506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 10
               

               Conread position:
               96-417
               

               Cow position:
               chrX:19541093-19540780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               8, 21
               

               Conread position:
               96-500
               

               Cow position:
               chrX:13138979-13138575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               268
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               38, 94
               

               Conread position:
               96-519
               

               Cow position:
               chrX:39939520-39939094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 87
               

               Conread position:
               96-543
               

               Cow position:
               chrX:44367033-44367454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               293
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               43, 13
               

               Conread position:
               97-335
               

               Cow position:
               chrX:20956950-20957182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               34, 59
               

               Conread position:
               97-379
               

               Cow position:
               chrX:677856-677576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               21, 51
               

               Conread position:
               97-492
               

               Cow position:
               chrX:22812303-22812695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               227, 66
               

               Conread position:
               97-501
               

               Cow position:
               chrX:11950253-11949851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 97
               

               Conread position:
               97-501
               

               Cow position:
               chrX:23038752-23038355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 49
               

               Conread position:
               97-511
               

               Cow position:
               chrX:11674298-11674705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 41
               

               Conread position:
               97-526
               

               Cow position:
               chrX:18293186-18293595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 19
               

               Conread position:
               98-323
               

               Cow position:
               chrX:1002245-1002451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               98-453
               

               Cow position:
               chrX:2323952-2324298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               352, 16
               

               Conread position:
               99-284
               

               Cow position:
               chrX:7444153-7444331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               22, 10
               

               Conread position:
               99-309
               

               Cow position:
               chrX:12307516-12307308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               22, 10
               

               Conread position:
               99-309
               

               Cow position:
               chrX:13430543-13430346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               13, 24
               

               Conread position:
               99-317
               

               Cow position:
               chrX:22140444-22140231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               24, 10
               

               Conread position:
               99-322
               

               Cow position:
               chrX:5841540-5841756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               13, 24
               

               Conread position:
               99-346
               

               Cow position:
               chrX:20503886-20504132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               184
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               13, 67
               

               Conread position:
               99-425
               

               Cow position:
               chrX:19211293-19210974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 61
               

               Conread position:
               99-461
               

               Cow position:
               chrX:5667784-5667444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               252
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               114, 15
               

               Conread position:
               99-461
               

               Cow position:
               chrX:37488975-37489331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 10
               

               Conread position:
               99-466
               

               Cow position:
               chrX:41527268-41526903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               254
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               45, 10
               

               Conread position:
               99-468
               

               Cow position:
               chrX:30421896-30421538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 10
               

               Conread position:
               99-468
               

               Cow position:
               chrX:40384291-40384655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 10
               

               Conread position:
               99-473
               

               Cow position:
               chrX:16021130-16020771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 10
               

               Conread position:
               99-488
               

               Cow position:
               chrX:14462560-14462941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               273
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               22, 10
               

               Conread position:
               99-489
               

               Cow position:
               chrX:12310143-12309756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 15
               

               Conread position:
               99-491
               

               Cow position:
               chrX:13912338-13912725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 10
               

               Conread position:
               99-491
               

               Cow position:
               chrX:28559588-28559202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 10
               

               Conread position:
               99-500
               

               Cow position:
               chrX:2579665-2580059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 10
               

               Conread position:
               99-501
               

               Cow position:
               chrX:1550211-1550592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               280
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               50, 10
               

               Conread position:
               99-501
               

               Cow position:
               chrX:2103651-2104047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 10
               

               Conread position:
               99-501
               

               Cow position:
               chrX:2559714-2559318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 10
               

               Conread position:
               99-501
               

               Cow position:
               chrX:2932474-2932078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 10
               

               Conread position:
               99-501
               

               Cow position:
               chrX:3361067-3361461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 10
               

               Conread position:
               99-501
               

               Cow position:
               chrX:3372607-3372211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 10
               

               Conread position:
               99-501
               

               Cow position:
               chrX:4751123-4750731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               99-501
               

               Cow position:
               chrX:5892474-5892870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 25
               

               Conread position:
               99-501
               

               Cow position:
               chrX:6372426-6372823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 10
               

               Conread position:
               99-501
               

               Cow position:
               chrX:7755151-7755543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 10
               

               Conread position:
               99-501
               

               Cow position:
               chrX:8529786-8530182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 10
               

               Conread position:
               99-501
               

               Cow position:
               chrX:10528540-10528132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 15
               

               Conread position:
               99-501
               

               Cow position:
               chrX:11146087-11145696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 10
               

               Conread position:
               99-501
               

               Cow position:
               chrX:11855413-11855811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 10
               

               Conread position:
               99-501
               

               Cow position:
               chrX:14782099-14781703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 15
               

               Conread position:
               99-501
               

               Cow position:
               chrX:15260373-15259977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 10
               

               Conread position:
               99-501
               

               Cow position:
               chrX:16808568-16808194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               270
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               99-501
               

               Cow position:
               chrX:17994705-17995101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 15
               

               Conread position:
               99-501
               

               Cow position:
               chrX:18656559-18656163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 10
               

               Conread position:
               99-501
               

               Cow position:
               chrX:21685865-21686262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 10
               

               Conread position:
               99-501
               

               Cow position:
               chrX:24735190-24735585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 10
               

               Conread position:
               99-501
               

               Cow position:
               chrX:24769611-24769218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 10
               

               Conread position:
               99-501
               

               Cow position:
               chrX:26275384-26275781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 15
               

               Conread position:
               99-501
               

               Cow position:
               chrX:26760322-26759926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 10
               

               Conread position:
               99-501
               

               Cow position:
               chrX:26974156-26974552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 10
               

               Conread position:
               99-501
               

               Cow position:
               chrX:29083313-29083721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 10
               

               Conread position:
               99-501
               

               Cow position:
               chrX:30817023-30816627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 15
               

               Conread position:
               99-501
               

               Cow position:
               chrX:32330868-32331273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 93
               

               Conread position:
               99-501
               

               Cow position:
               chrX:38961604-38961204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 10
               

               Conread position:
               99-502
               

               Cow position:
               chrX:16465547-16465943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 10
               

               Conread position:
               99-504
               

               Cow position:
               chrX:39559117-39558722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 9
               

               Conread position:
               99-526
               

               Cow position:
               chrX:20131635-20131219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 24
               

               Conread position:
               99-547
               

               Cow position:
               chrX:31261387-31260953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 10
               

               Conread position:
               99-589
               

               Cow position:
               chrX:28156777-28157255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               494
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 10
               

               Conread position:
               100-500
               

               Cow position:
               chrX:42380605-42380200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 7
               

               Conread position:
               100-501
               

               Cow position:
               chrX:46296896-46297302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 94
               

               Conread position:
               100-547
               

               Cow position:
               chrX:38999145-38999581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 7
               

               Conread position:
               101-305
               

               Cow position:
               chrX:30086065-30085867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               21, 6
               

               Conread position:
               101-308
               

               Cow position:
               chrX:29790573-29790373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               20, 45
               

               Conread position:
               101-327
               

               Cow position:
               chrX:2146339-2146558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               196, 6
               

               Conread position:
               101-371
               

               Cow position:
               chrX:39548645-39548909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               20, 37
               

               Conread position:
               101-383
               

               Cow position:
               chrX:35028487-35028764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               12, 48
               

               Conread position:
               101-387
               

               Cow position:
               chrX:2365903-2366189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               214
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               20, 6
               

               Conread position:
               101-419
               

               Cow position:
               chrX:24109365-24109048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               230
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               12, 62
               

               Conread position:
               101-425
               

               Cow position:
               chrX:38935661-38935991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               230
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               12, 102
               

               Conread position:
               101-441
               

               Cow position:
               chrX:31372702-31373044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 90
               

               Conread position:
               101-457
               

               Cow position:
               chrX:21667062-21666732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               262
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               19, 6
               

               Conread position:
               101-457
               

               Cow position:
               chrX:30089807-30089454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 6
               

               Conread position:
               101-461
               

               Cow position:
               chrX:40693490-40693138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               261
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               23, 8
               

               Conread position:
               101-470
               

               Cow position:
               chrX:40365506-40365133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 93
               

               Conread position:
               101-485
               

               Cow position:
               chrX:10301367-10301745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 29
               

               Conread position:
               101-490
               

               Cow position:
               chrX:6766496-6766113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 8
               

               Conread position:
               101-490
               

               Cow position:
               chrX:34553990-34554366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               265
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               48, 18
               

               Conread position:
               101-491
               

               Cow position:
               chrX:5639687-5639305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               275, 18
               

               Conread position:
               101-491
               

               Cow position:
               chrX:22871360-22871750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 6
               

               Conread position:
               101-496
               

               Cow position:
               chrX:4408794-4409196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 8
               

               Conread position:
               101-496
               

               Cow position:
               chrX:7805618-7806013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 6
               

               Conread position:
               101-497
               

               Cow position:
               chrX:3211297-3210908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               330, 8
               

               Conread position:
               101-501
               

               Cow position:
               chrX:160676-161070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 23
               

               Conread position:
               101-501
               

               Cow position:
               chrX:2160010-2160407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 38
               

               Conread position:
               101-501
               

               Cow position:
               chrX:23969590-23970000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 94
               

               Conread position:
               101-501
               

               Cow position:
               chrX:23987792-23988179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 24
               

               Conread position:
               101-501
               

               Cow position:
               chrX:42010294-42010674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               348, 57
               

               Conread position:
               101-502
               

               Cow position:
               chrX:2649111-2648719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               344, 6
               

               Conread position:
               101-502
               

               Cow position:
               chrX:15113911-15114314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 63
               

               Conread position:
               101-502
               

               Cow position:
               chrX:20021785-20022180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               260
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               33, 15
               

               Conread position:
               101-502
               

               Cow position:
               chrX:40279055-40279445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 6
               

               Conread position:
               101-506
               

               Cow position:
               chrX:32182785-32182390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 6
               

               Conread position:
               101-511
               

               Cow position:
               chrX:26508466-26508891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 6
               

               Conread position:
               101-528
               

               Cow position:
               chrX:17158572-17158159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 6
               

               Conread position:
               101-529
               

               Cow position:
               chrX:4767963-4768389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 29
               

               Conread position:
               101-531
               

               Cow position:
               chrX:22330325-22329904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               291
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               20, 6
               

               Conread position:
               101-547
               

               Cow position:
               chrX:19929674-19930109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 62
               

               Conread position:
               101-547
               

               Cow position:
               chrX:44901376-44901829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 51
               

               Conread position:
               101-550
               

               Cow position:
               chrX:23927939-23927497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 6
               

               Conread position:
               101-555
               

               Cow position:
               chrX:9837361-9837805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 6
               

               Conread position:
               102-539
               

               Cow position:
               chrX:13889076-13889510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 44
               

               Conread position:
               104-314
               

               Cow position:
               chrX:32145023-32144814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               20, 36
               

               Conread position:
               104-385
               

               Cow position:
               chrX:45884074-45884356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               31, 73
               

               Conread position:
               105-344
               

               Cow position:
               chrX:22870064-22870295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               19, 88
               

               Conread position:
               105-426
               

               Cow position:
               chrX:16688510-16688834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               229
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               19, 85
               

               Conread position:
               105-501
               

               Cow position:
               chrX:865638-866038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 88
               

               Conread position:
               105-501
               

               Cow position:
               chrX:10412733-10412330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 89
               

               Conread position:
               105-501
               

               Cow position:
               chrX:21226719-21227116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 88
               

               Conread position:
               105-501
               

               Cow position:
               chrX:21833113-21833527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 58
               

               Conread position:
               105-501
               

               Cow position:
               chrX:23317170-23316778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 88
               

               Conread position:
               105-501
               

               Cow position:
               chrX:30455379-30454980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 87
               

               Conread position:
               105-526
               

               Cow position:
               chrX:17663674-17663251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 39
               

               Conread position:
               106-284
               

               Cow position:
               chrX:39292975-39292794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               18, 87
               

               Conread position:
               106-339
               

               Cow position:
               chrX:3121654-3121416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               19, 89
               

               Conread position:
               106-441
               

               Cow position:
               chrX:25451571-25451903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               236
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               28, 55
               

               Conread position:
               106-452
               

               Cow position:
               chrX:24923100-24923442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               243
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               38, 18
               

               Conread position:
               106-457
               

               Cow position:
               chrX:2500388-2500034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               249
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               18, 87
               

               Conread position:
               106-458
               

               Cow position:
               chrX:7695027-7695379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 83
               

               Conread position:
               106-460
               

               Cow position:
               chrX:2763814-2764169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 53
               

               Conread position:
               106-468
               

               Cow position:
               chrX:40601361-40601728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               253
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               18, 87
               

               Conread position:
               106-478
               

               Cow position:
               chrX:15574636-15574266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               349, 87
               

               Conread position:
               106-490
               

               Cow position:
               chrX:40268728-40269107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               341, 30
               

               Conread position:
               106-492
               

               Cow position:
               chrX:24309860-24309486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 54
               

               Conread position:
               106-497
               

               Cow position:
               chrX:18247596-18247984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 83
               

               Conread position:
               106-500
               

               Cow position:
               chrX:11819607-11820000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 90
               

               Conread position:
               106-500
               

               Cow position:
               chrX:29841926-29841528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 47
               

               Conread position:
               106-500
               

               Cow position:
               chrX:31728706-31729099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 83
               

               Conread position:
               106-501
               

               Cow position:
               chrX:13928499-13928112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 31
               

               Conread position:
               106-501
               

               Cow position:
               chrX:27996894-27997292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 93
               

               Conread position:
               106-501
               

               Cow position:
               chrX:30139541-30139142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 87
               

               Conread position:
               106-501
               

               Cow position:
               chrX:39560409-39560010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 59
               

               Conread position:
               106-506
               

               Cow position:
               chrX:42539848-42540245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 18
               

               Conread position:
               106-507
               

               Cow position:
               chrX:24173918-24173517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 64
               

               Conread position:
               106-507
               

               Cow position:
               chrX:38052189-38051783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 87
               

               Conread position:
               108-415
               

               Cow position:
               chrX:28133368-28133665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               216
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               109-287
               

               Cow position:
               chrX:37065952-37066123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               109-310
               

               Cow position:
               chrX:26622386-26622191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               109-497
               

               Cow position:
               chrX:14908266-14908649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               109-528
               

               Cow position:
               chrX:17902239-17901842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               281
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               97, 32
               

               Conread position:
               109-534
               

               Cow position:
               chrX:25405105-25404683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 38
               

               Conread position:
               109-534
               

               Cow position:
               chrX:44018955-44019372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 11
               

               Conread position:
               110-366
               

               Cow position:
               chrX:27629105-27629356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               186
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               12, 30
               

               Conread position:
               110-501
               

               Cow position:
               chrX:1331192-1331575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 80
               

               Conread position:
               110-501
               

               Cow position:
               chrX:14598101-14598487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 28
               

               Conread position:
               110-501
               

               Cow position:
               chrX:47380203-47379825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               261
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               103, 44
               

               Conread position:
               110-507
               

               Cow position:
               chrX:14801565-14801169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 28
               

               Conread position:
               110-531
               

               Cow position:
               chrX:27239991-27240402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               275
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               31, 8
               

               Conread position:
               111-501
               

               Cow position:
               chrX:17291186-17291572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 78
               

               Conread position:
               112-460
               

               Cow position:
               chrX:20362888-20362533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               259
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               207, 29
               

               Conread position:
               112-501
               

               Cow position:
               chrX:13786128-13785736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 48
               

               Conread position:
               116-501
               

               Cow position:
               chrX:3406093-3405714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               259
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               205, 19
               

               Conread position:
               116-501
               

               Cow position:
               chrX:15173266-15172885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 72
               

               Conread position:
               116-531
               

               Cow position:
               chrX:2878481-2878059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               290
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               202, 5
               

               Conread position:
               116-531
               

               Cow position:
               chrX:26844764-26845178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 74
               

               Conread position:
               119-501
               

               Cow position:
               chrX:16040420-16040038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 42
               

               Conread position:
               119-501
               

               Cow position:
               chrX:37852404-37852781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 18
               

               Conread position:
               119-528
               

               Cow position:
               chrX:25329285-25329676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 39
               

               Conread position:
               119-531
               

               Cow position:
               chrX:2701568-2701165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               316, 14
               

               Conread position:
               120-323
               

               Cow position:
               chrX:39698265-39698466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               29, 68
               

               Conread position:
               121-272
               

               Cow position:
               chrX:30681241-30681092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               23, 61
               

               Conread position:
               121-308
               

               Cow position:
               chrX:16517869-16517684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               26, 39
               

               Conread position:
               121-308
               

               Cow position:
               chrX:43649044-43648863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               27, 12
               

               Conread position:
               121-309
               

               Cow position:
               chrX:24588473-24588290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               28, 67
               

               Conread position:
               121-310
               

               Cow position:
               chrX:38228050-38227862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               28, 69
               

               Conread position:
               121-335
               

               Cow position:
               chrX:27395762-27395562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               121-337
               

               Cow position:
               chrX:40560278-40560068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               16, 67
               

               Conread position:
               121-346
               

               Cow position:
               chrX:23697138-23696909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               25, 44
               

               Conread position:
               121-400
               

               Cow position:
               chrX:35283543-35283816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               18, 67
               

               Conread position:
               121-416
               

               Cow position:
               chrX:19657760-19658053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               208
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               28, 73
               

               Conread position:
               121-425
               

               Cow position:
               chrX:1729595-1729297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               216
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               16, 39
               

               Conread position:
               121-425
               

               Cow position:
               chrX:36839969-36840268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               219
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               85, 26
               

               Conread position:
               121-426
               

               Cow position:
               chrX:39387167-39386865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               216
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               28, 67
               

               Conread position:
               121-441
               

               Cow position:
               chrX:4177085-4177400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               217
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               121-441
               

               Cow position:
               chrX:32584668-32584351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 39
               

               Conread position:
               121-452
               

               Cow position:
               chrX:32057649-32057307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               235
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               28, 39
               

               Conread position:
               121-455
               

               Cow position:
               chrX:30165408-30165081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               28, 67
               

               Conread position:
               121-460
               

               Cow position:
               chrX:21582706-21583043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 67
               

               Conread position:
               121-462
               

               Cow position:
               chrX:11744530-11744869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 69
               

               Conread position:
               121-462
               

               Cow position:
               chrX:28542616-28542292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               121-470
               

               Cow position:
               chrX:23022576-23022924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               233
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               28, 67
               

               Conread position:
               121-476
               

               Cow position:
               chrX:29170075-29169724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 15
               

               Conread position:
               121-481
               

               Cow position:
               chrX:18950473-18950117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 67
               

               Conread position:
               121-482
               

               Cow position:
               chrX:20652678-20653021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 39
               

               Conread position:
               121-487
               

               Cow position:
               chrX:43566715-43567081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               242
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               28, 74
               

               Conread position:
               121-489
               

               Cow position:
               chrX:40788397-40788783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 67
               

               Conread position:
               121-492
               

               Cow position:
               chrX:6543525-6543889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 70
               

               Conread position:
               121-492
               

               Cow position:
               chrX:47000390-47000019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               14, 69
               

               Conread position:
               121-493
               

               Cow position:
               chrX:12178942-12179309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 67
               

               Conread position:
               121-495
               

               Cow position:
               chrX:37363986-37364353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 38
               

               Conread position:
               121-496
               

               Cow position:
               chrX:45464712-45465081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               255
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               16, 38
               

               Conread position:
               121-499
               

               Cow position:
               chrX:4905727-4905349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 67
               

               Conread position:
               121-499
               

               Cow position:
               chrX:16702934-16703310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 67
               

               Conread position:
               121-499
               

               Cow position:
               chrX:26755362-26754989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 39
               

               Conread position:
               121-500
               

               Cow position:
               chrX:2479360-2478986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               325, 14
               

               Conread position:
               121-500
               

               Cow position:
               chrX:18193953-18194331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 67
               

               Conread position:
               121-501
               

               Cow position:
               chrX:323177-323557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 28
               

               Conread position:
               121-501
               

               Cow position:
               chrX:5375627-5376011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 67
               

               Conread position:
               121-501
               

               Cow position:
               chrX:7551538-7551153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 67
               

               Conread position:
               121-501
               

               Cow position:
               chrX:7572649-7573021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 27
               

               Conread position:
               121-501
               

               Cow position:
               chrX:10915297-10915680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 78
               

               Conread position:
               121-501
               

               Cow position:
               chrX:13406027-13405655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 67
               

               Conread position:
               121-501
               

               Cow position:
               chrX:16711219-16711596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 66
               

               Conread position:
               121-501
               

               Cow position:
               chrX:16854123-16853747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 67
               

               Conread position:
               121-501
               

               Cow position:
               chrX:18244248-18244631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 19
               

               Conread position:
               121-501
               

               Cow position:
               chrX:18898386-18898009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 67
               

               Conread position:
               121-501
               

               Cow position:
               chrX:20878504-20878120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 67
               

               Conread position:
               121-501
               

               Cow position:
               chrX:20953796-20954168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 39
               

               Conread position:
               121-501
               

               Cow position:
               chrX:22811153-22811528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 67
               

               Conread position:
               121-501
               

               Cow position:
               chrX:23387275-23386897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 67
               

               Conread position:
               121-501
               

               Cow position:
               chrX:23395870-23396248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 67
               

               Conread position:
               121-501
               

               Cow position:
               chrX:23452182-23451815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               260
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               28, 67
               

               Conread position:
               121-501
               

               Cow position:
               chrX:24292416-24292029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 67
               

               Conread position:
               121-501
               

               Cow position:
               chrX:26531236-26531600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 70
               

               Conread position:
               121-501
               

               Cow position:
               chrX:27318494-27318858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 67
               

               Conread position:
               121-501
               

               Cow position:
               chrX:29849366-29848989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 67
               

               Conread position:
               121-501
               

               Cow position:
               chrX:29942419-29942791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 26
               

               Conread position:
               121-501
               

               Cow position:
               chrX:30144021-30143642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 67
               

               Conread position:
               121-501
               

               Cow position:
               chrX:30180664-30180284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 67
               

               Conread position:
               121-501
               

               Cow position:
               chrX:30228851-30228468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 67
               

               Conread position:
               121-501
               

               Cow position:
               chrX:31202104-31202482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 67
               

               Conread position:
               121-501
               

               Cow position:
               chrX:34761329-34761708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 39
               

               Conread position:
               121-501
               

               Cow position:
               chrX:36794272-36794636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 67
               

               Conread position:
               121-501
               

               Cow position:
               chrX:38007722-38007336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 70
               

               Conread position:
               121-501
               

               Cow position:
               chrX:38150951-38151330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 67
               

               Conread position:
               121-501
               

               Cow position:
               chrX:38852423-38852801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 38
               

               Conread position:
               121-501
               

               Cow position:
               chrX:40545359-40544968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 67
               

               Conread position:
               121-501
               

               Cow position:
               chrX:41156574-41156953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 67
               

               Conread position:
               121-502
               

               Cow position:
               chrX:5354040-5353660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 67
               

               Conread position:
               121-502
               

               Cow position:
               chrX:16782543-16782923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 67
               

               Conread position:
               121-502
               

               Cow position:
               chrX:24483104-24482727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               253
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               28, 52
               

               Conread position:
               121-502
               

               Cow position:
               chrX:27977571-27977186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 67
               

               Conread position:
               121-504
               

               Cow position:
               chrX:34990326-34990705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 26
               

               Conread position:
               121-506
               

               Cow position:
               chrX:14162455-14162838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 67
               

               Conread position:
               121-506
               

               Cow position:
               chrX:25459375-25458990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 53
               

               Conread position:
               121-512
               

               Cow position:
               chrX:12290004-12290390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 9
               

               Conread position:
               121-512
               

               Cow position:
               chrX:24441976-24441594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               272
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               14, 27
               

               Conread position:
               121-519
               

               Cow position:
               chrX:22125592-22125206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 67
               

               Conread position:
               121-524
               

               Cow position:
               chrX:6835990-6835598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               326, 26
               

               Conread position:
               121-524
               

               Cow position:
               chrX:21318940-21319357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               186, 20
               

               Conread position:
               121-525
               

               Cow position:
               chrX:33803732-33803355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               307, 20
               

               Conread position:
               121-525
               

               Cow position:
               chrX:41733927-41733533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               121-526
               

               Cow position:
               chrX:34009014-34009411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 68
               

               Conread position:
               121-526
               

               Cow position:
               chrX:39352372-39351984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 26
               

               Conread position:
               121-528
               

               Cow position:
               chrX:10440563-10440177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               329, 24
               

               Conread position:
               121-531
               

               Cow position:
               chrX:24170054-24169648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 44
               

               Conread position:
               121-532
               

               Cow position:
               chrX:38140774-38140365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 38
               

               Conread position:
               121-534
               

               Cow position:
               chrX:25282230-25281816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 39
               

               Conread position:
               121-547
               

               Cow position:
               chrX:37832204-37831789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 20
               

               Conread position:
               121-637
               

               Cow position:
               chrX:5248648-5249158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               519
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               15, 39
               

               Conread position:
               122-495
               

               Cow position:
               chrX:16355096-16354716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               262
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               9, 38
               

               Conread position:
               122-525
               

               Cow position:
               chrX:20976783-20976400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 38
               

               Conread position:
               122-534
               

               Cow position:
               chrX:34078315-34078700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               123-396
               

               Cow position:
               chrX:37544249-37544521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               195, 13
               

               Conread position:
               123-468
               

               Cow position:
               chrX:343449-343788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               225
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               17, 66
               

               Conread position:
               123-494
               

               Cow position:
               chrX:41106737-41106382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               263
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               49, 13
               

               Conread position:
               123-501
               

               Cow position:
               chrX:3952119-3952492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               254
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               11, 36
               

               Conread position:
               123-501
               

               Cow position:
               chrX:45658812-45658436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               256
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               15, 60
               

               Conread position:
               123-502
               

               Cow position:
               chrX:4420482-4420846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               252
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               365, 13
               

               Conread position:
               123-507
               

               Cow position:
               chrX:29907937-29907553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 65
               

               Conread position:
               123-523
               

               Cow position:
               chrX:21764856-21765264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               264
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               13, 203
               

               Conread position:
               124-293
               

               Cow position:
               chrX:25204602-25204768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               18, 37
               

               Conread position:
               124-308
               

               Cow position:
               chrX:23974177-23973995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               13, 41
               

               Conread position:
               124-337
               

               Cow position:
               chrX:17794099-17794306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               124-338
               

               Cow position:
               chrX:12102699-12102487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               25, 64
               

               Conread position:
               124-340
               

               Cow position:
               chrX:25848067-25848285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               13, 36
               

               Conread position:
               124-428
               

               Cow position:
               chrX:37795209-37794913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               13, 36
               

               Conread position:
               124-446
               

               Cow position:
               chrX:13800555-13800240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               124-460
               

               Cow position:
               chrX:5332167-5331836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               232
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               27, 49
               

               Conread position:
               124-462
               

               Cow position:
               chrX:31570317-31570650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 65
               

               Conread position:
               124-474
               

               Cow position:
               chrX:20999011-20998660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 64
               

               Conread position:
               124-476
               

               Cow position:
               chrX:67218-67559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               12, 36
               

               Conread position:
               124-483
               

               Cow position:
               chrX:15091502-15091145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               304, 63
               

               Conread position:
               124-488
               

               Cow position:
               chrX:10852340-10851991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               91, 21
               

               Conread position:
               124-490
               

               Cow position:
               chrX:2382734-2383093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               309, 5
               

               Conread position:
               124-496
               

               Cow position:
               chrX:9438770-9439157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 17
               

               Conread position:
               124-497
               

               Cow position:
               chrX:13524331-13523968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               265
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               82, 21
               

               Conread position:
               124-497
               

               Cow position:
               chrX:35847491-35847853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               257
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               13, 51
               

               Conread position:
               124-501
               

               Cow position:
               chrX:362187-361811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 24
               

               Conread position:
               124-501
               

               Cow position:
               chrX:5334549-5334177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 49
               

               Conread position:
               124-501
               

               Cow position:
               chrX:11083340-11082972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 66
               

               Conread position:
               124-501
               

               Cow position:
               chrX:19109775-19109399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 24
               

               Conread position:
               124-501
               

               Cow position:
               chrX:22493273-22493649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 64
               

               Conread position:
               124-501
               

               Cow position:
               chrX:22612656-22613028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 12
               

               Conread position:
               124-501
               

               Cow position:
               chrX:23280275-23280649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 64
               

               Conread position:
               124-501
               

               Cow position:
               chrX:30199726-30199350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 64
               

               Conread position:
               124-506
               

               Cow position:
               chrX:11405955-11406325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               255
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               324, 21
               

               Conread position:
               124-507
               

               Cow position:
               chrX:20020845-20021226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 58
               

               Conread position:
               124-526
               

               Cow position:
               chrX:20974323-20974722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 50
               

               Conread position:
               124-528
               

               Cow position:
               chrX:1793899-1793496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 12
               

               Conread position:
               124-528
               

               Cow position:
               chrX:20653835-20654240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 47
               

               Conread position:
               124-529
               

               Cow position:
               chrX:2790503-2790906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               273
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               39, 63
               

               Conread position:
               124-534
               

               Cow position:
               chrX:13069477-13069069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 23
               

               Conread position:
               124-534
               

               Cow position:
               chrX:13090038-13089630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 23
               

               Conread position:
               124-544
               

               Cow position:
               chrX:24888868-24888454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               282
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               84, 25
               

               Conread position:
               124-579
               

               Cow position:
               chrX:13030945-13030492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 24
               

               Conread position:
               125-276
               

               Cow position:
               chrX:3596735-3596879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               125-277
               

               Cow position:
               chrX:15977681-15977536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               125-282
               

               Cow position:
               chrX:10059737-10059887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               124, 11
               

               Conread position:
               125-287
               

               Cow position:
               chrX:19608948-19609103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               125-289
               

               Cow position:
               chrX:31605076-31604919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               125-298
               

               Cow position:
               chrX:12097562-12097733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               24, 63
               

               Conread position:
               125-324
               

               Cow position:
               chrX:22077070-22076878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               125-324
               

               Cow position:
               chrX:41886100-41886292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               125-327
               

               Cow position:
               chrX:23909011-23908816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               125-327
               

               Cow position:
               chrX:46093550-46093358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               12, 34
               

               Conread position:
               125-341
               

               Cow position:
               chrX:24280178-24280381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               202, 22
               

               Conread position:
               125-347
               

               Cow position:
               chrX:303761-303977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               125-350
               

               Cow position:
               chrX:40580896-40580673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               26, 63
               

               Conread position:
               125-368
               

               Cow position:
               chrX:38839903-38840141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               125-371
               

               Cow position:
               chrX:11409062-11408823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               125-387
               

               Cow position:
               chrX:37403967-37403709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               125-397
               

               Cow position:
               chrX:20580278-20580015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               125-444
               

               Cow position:
               chrX:27616075-27616388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               222
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               24, 42
               

               Conread position:
               125-445
               

               Cow position:
               chrX:22579120-22578804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               225
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               24, 35
               

               Conread position:
               125-454
               

               Cow position:
               chrX:14049922-14049599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 11
               

               Conread position:
               125-461
               

               Cow position:
               chrX:34719785-34720115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 11
               

               Conread position:
               125-467
               

               Cow position:
               chrX:41082515-41082854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 65
               

               Conread position:
               125-471
               

               Cow position:
               chrX:29722486-29722824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 49
               

               Conread position:
               125-475
               

               Cow position:
               chrX:34253501-34253844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               125-481
               

               Cow position:
               chrX:23341724-23341371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               242
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               19, 34
               

               Conread position:
               125-488
               

               Cow position:
               chrX:7119372-7119015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 11
               

               Conread position:
               125-488
               

               Cow position:
               chrX:37080252-37079890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 69
               

               Conread position:
               125-490
               

               Cow position:
               chrX:2300148-2300510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 34
               

               Conread position:
               125-491
               

               Cow position:
               chrX:28624494-28624127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               244
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               21, 35
               

               Conread position:
               125-492
               

               Cow position:
               chrX:34442175-34441814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 63
               

               Conread position:
               125-493
               

               Cow position:
               chrX:21255046-21255410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               167, 20
               

               Conread position:
               125-495
               

               Cow position:
               chrX:4482223-4482587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 22
               

               Conread position:
               125-496
               

               Cow position:
               chrX:24006562-24006191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               254
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               24, 63
               

               Conread position:
               125-499
               

               Cow position:
               chrX:24202298-24202666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 33
               

               Conread position:
               125-501
               

               Cow position:
               chrX:2293328-2292958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 11
               

               Conread position:
               125-501
               

               Cow position:
               chrX:3096486-3096113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 63
               

               Conread position:
               125-501
               

               Cow position:
               chrX:3417865-3417497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               308, 11
               

               Conread position:
               125-501
               

               Cow position:
               chrX:3464805-3464434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 11
               

               Conread position:
               125-501
               

               Cow position:
               chrX:4343023-4343391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 11
               

               Conread position:
               125-501
               

               Cow position:
               chrX:5280581-5280211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 11
               

               Conread position:
               125-501
               

               Cow position:
               chrX:5289419-5289045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 63
               

               Conread position:
               125-501
               

               Cow position:
               chrX:5305873-5306241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               224, 11
               

               Conread position:
               125-501
               

               Cow position:
               chrX:5646832-5646462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 11
               

               Conread position:
               125-501
               

               Cow position:
               chrX:5866418-5866788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               224, 11
               

               Conread position:
               125-501
               

               Cow position:
               chrX:6493002-6493374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 33
               

               Conread position:
               125-501
               

               Cow position:
               chrX:6581206-6581576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 11
               

               Conread position:
               125-501
               

               Cow position:
               chrX:7096725-7097100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 35
               

               Conread position:
               125-501
               

               Cow position:
               chrX:8434931-8434561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 10
               

               Conread position:
               125-501
               

               Cow position:
               chrX:9128328-9128698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 11
               

               Conread position:
               125-501
               

               Cow position:
               chrX:10445143-10444773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               224, 11
               

               Conread position:
               125-501
               

               Cow position:
               chrX:10465057-10465427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 11
               

               Conread position:
               125-501
               

               Cow position:
               chrX:10923299-10922929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 11
               

               Conread position:
               125-501
               

               Cow position:
               chrX:10931940-10932314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 63
               

               Conread position:
               125-501
               

               Cow position:
               chrX:11566186-11566556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 11
               

               Conread position:
               125-501
               

               Cow position:
               chrX:12001875-12001505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 11
               

               Conread position:
               125-501
               

               Cow position:
               chrX:12145374-12145737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 11
               

               Conread position:
               125-501
               

               Cow position:
               chrX:12360160-12360530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 11
               

               Conread position:
               125-501
               

               Cow position:
               chrX:12457970-12458340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               309, 11
               

               Conread position:
               125-501
               

               Cow position:
               chrX:14458895-14458525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               299, 11
               

               Conread position:
               125-501
               

               Cow position:
               chrX:15346697-15346327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 11
               

               Conread position:
               125-501
               

               Cow position:
               chrX:15621260-15620890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 11
               

               Conread position:
               125-501
               

               Cow position:
               chrX:16086856-16086482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 63
               

               Conread position:
               125-501
               

               Cow position:
               chrX:16285483-16285853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 11
               

               Conread position:
               125-501
               

               Cow position:
               chrX:17054841-17055211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               224, 11
               

               Conread position:
               125-501
               

               Cow position:
               chrX:18222685-18223055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 11
               

               Conread position:
               125-501
               

               Cow position:
               chrX:18451807-18451437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 11
               

               Conread position:
               125-501
               

               Cow position:
               chrX:18462703-18462333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 9
               

               Conread position:
               125-501
               

               Cow position:
               chrX:18488442-18488072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 11
               

               Conread position:
               125-501
               

               Cow position:
               chrX:20032559-20032189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               309, 11
               

               Conread position:
               125-501
               

               Cow position:
               chrX:21343662-21344036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 64
               

               Conread position:
               125-501
               

               Cow position:
               chrX:21592558-21592928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 63
               

               Conread position:
               125-501
               

               Cow position:
               chrX:22601144-22600774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 55
               

               Conread position:
               125-501
               

               Cow position:
               chrX:23572549-23572158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               262
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               26, 63
               

               Conread position:
               125-501
               

               Cow position:
               chrX:23986517-23986890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 63
               

               Conread position:
               125-501
               

               Cow position:
               chrX:24413302-24413672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 11
               

               Conread position:
               125-501
               

               Cow position:
               chrX:24467852-24467483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 11
               

               Conread position:
               125-501
               

               Cow position:
               chrX:24509139-24509509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 11
               

               Conread position:
               125-501
               

               Cow position:
               chrX:27704866-27705235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 34
               

               Conread position:
               125-501
               

               Cow position:
               chrX:27758979-27759349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 11
               

               Conread position:
               125-501
               

               Cow position:
               chrX:28313697-28314067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 11
               

               Conread position:
               125-501
               

               Cow position:
               chrX:28503608-28503978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 11
               

               Conread position:
               125-501
               

               Cow position:
               chrX:28518453-28518081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 63
               

               Conread position:
               125-501
               

               Cow position:
               chrX:28706374-28706744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 11
               

               Conread position:
               125-501
               

               Cow position:
               chrX:29759955-29760341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               263
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               22, 34
               

               Conread position:
               125-501
               

               Cow position:
               chrX:30053196-30052827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 15
               

               Conread position:
               125-501
               

               Cow position:
               chrX:30060156-30060530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               321, 62
               

               Conread position:
               125-501
               

               Cow position:
               chrX:30752043-30752416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 62
               

               Conread position:
               125-501
               

               Cow position:
               chrX:30824920-30825290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 11
               

               Conread position:
               125-501
               

               Cow position:
               chrX:33763616-33763986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               318, 11
               

               Conread position:
               125-501
               

               Cow position:
               chrX:36195364-36195734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 11
               

               Conread position:
               125-501
               

               Cow position:
               chrX:36535463-36535093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 11
               

               Conread position:
               125-501
               

               Cow position:
               chrX:36729656-36730026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 11
               

               Conread position:
               125-501
               

               Cow position:
               chrX:37815863-37816230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               125-501
               

               Cow position:
               chrX:38014366-38014736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 11
               

               Conread position:
               125-501
               

               Cow position:
               chrX:38230995-38230625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 11
               

               Conread position:
               125-501
               

               Cow position:
               chrX:38330654-38331024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 11
               

               Conread position:
               125-501
               

               Cow position:
               chrX:39185445-39185815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 11
               

               Conread position:
               125-501
               

               Cow position:
               chrX:39713818-39714191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 35
               

               Conread position:
               125-501
               

               Cow position:
               chrX:41847263-41846892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 49
               

               Conread position:
               125-501
               

               Cow position:
               chrX:45236738-45237108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               318, 11
               

               Conread position:
               125-501
               

               Cow position:
               chrX:45903449-45903820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 11
               

               Conread position:
               125-502
               

               Cow position:
               chrX:388776-389147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               253
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               31, 10
               

               Conread position:
               125-502
               

               Cow position:
               chrX:3396505-3396131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 63
               

               Conread position:
               125-502
               

               Cow position:
               chrX:27590763-27590390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 50
               

               Conread position:
               125-502
               

               Cow position:
               chrX:29225750-29226119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               125-502
               

               Cow position:
               chrX:30163971-30163595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               252
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               24, 63
               

               Conread position:
               125-506
               

               Cow position:
               chrX:165149-165531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               255
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               194, 6
               

               Conread position:
               125-534
               

               Cow position:
               chrX:25198707-25199114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 40
               

               Conread position:
               125-551
               

               Cow position:
               chrX:36479363-36478941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 11
               

               Conread position:
               125-570
               

               Cow position:
               chrX:32643758-32644196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               193
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               126-284
               

               Cow position:
               chrX:6673647-6673800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               126-303
               

               Cow position:
               chrX:18987710-18987881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               126-343
               

               Cow position:
               chrX:40707740-40707951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               126-492
               

               Cow position:
               chrX:15151407-15151051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 62
               

               Conread position:
               126-497
               

               Cow position:
               chrX:12095322-12094947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 64
               

               Conread position:
               126-497
               

               Cow position:
               chrX:16410107-16410479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               247
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               78, 50
               

               Conread position:
               126-502
               

               Cow position:
               chrX:34034592-34034968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 64
               

               Conread position:
               126-506
               

               Cow position:
               chrX:12092758-12092385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               239
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               19, 34
               

               Conread position:
               126-506
               

               Cow position:
               chrX:21973216-21973583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               322, 21
               

               Conread position:
               126-507
               

               Cow position:
               chrX:1393880-1394258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               252
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               185, 25
               

               Conread position:
               126-510
               

               Cow position:
               chrX:25144357-25144724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               309, 37
               

               Conread position:
               126-519
               

               Cow position:
               chrX:13057824-13058218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 37
               

               Conread position:
               126-527
               

               Cow position:
               chrX:41114472-41114864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               256
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               11, 21
               

               Conread position:
               127-446
               

               Cow position:
               chrX:27646686-27646992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               214
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               127-492
               

               Cow position:
               chrX:29876789-29876423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               260
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               22, 62
               

               Conread position:
               127-508
               

               Cow position:
               chrX:23218338-23218726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 9
               

               Conread position:
               128-426
               

               Cow position:
               chrX:26441988-26441694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               211
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               36, 21
               

               Conread position:
               128-447
               

               Cow position:
               chrX:22102501-22102187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               218
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               190, 8
               

               Conread position:
               128-491
               

               Cow position:
               chrX:35609256-35609618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 62
               

               Conread position:
               128-501
               

               Cow position:
               chrX:16046417-16046790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 66
               

               Conread position:
               128-501
               

               Cow position:
               chrX:17891816-17892185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 61
               

               Conread position:
               128-501
               

               Cow position:
               chrX:23134849-23135219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 60
               

               Conread position:
               128-638
               

               Cow position:
               chrX:487808-488319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               526
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 58
               

               Conread position:
               129-323
               

               Cow position:
               chrX:19878088-19878279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               77, 7
               

               Conread position:
               129-324
               

               Cow position:
               chrX:22116131-22115941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               121, 16
               

               Conread position:
               129-496
               

               Cow position:
               chrX:24174676-24174314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 18
               

               Conread position:
               129-501
               

               Cow position:
               chrX:19228796-19228438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 58
               

               Conread position:
               129-526
               

               Cow position:
               chrX:3582456-3582858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               196, 58
               

               Conread position:
               130-381
               

               Cow position:
               chrX:15340583-15340337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               85, 37
               

               Conread position:
               130-445
               

               Cow position:
               chrX:27408186-27407876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               204
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               6, 18
               

               Conread position:
               130-501
               

               Cow position:
               chrX:45421729-45421357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               249
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               10, 59
               

               Conread position:
               130-504
               

               Cow position:
               chrX:10256868-10256497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 6
               

               Conread position:
               130-506
               

               Cow position:
               chrX:20970193-20970564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               258
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               199, 28
               

               Conread position:
               131-417
               

               Cow position:
               chrX:7722232-7722520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               73, 5
               

               Conread position:
               131-490
               

               Cow position:
               chrX:9854553-9854904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               315, 27
               

               Conread position:
               131-492
               

               Cow position:
               chrX:4633579-4633224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 25
               

               Conread position:
               131-497
               

               Cow position:
               chrX:21191140-21191511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 56
               

               Conread position:
               131-501
               

               Cow position:
               chrX:30821860-30822226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               297, 16
               

               Conread position:
               131-501
               

               Cow position:
               chrX:35388634-35388265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 28
               

               Conread position:
               131-501
               

               Cow position:
               chrX:45042828-45043200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 27
               

               Conread position:
               131-508
               

               Cow position:
               chrX:1810880-1810509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               304, 16
               

               Conread position:
               131-528
               

               Cow position:
               chrX:30354668-30355058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               268, 32
               

               Conread position:
               131-529
               

               Cow position:
               chrX:22409453-22409051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 63
               

               Conread position:
               131-534
               

               Cow position:
               chrX:5649121-5648726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 28
               

               Conread position:
               131-534
               

               Cow position:
               chrX:9953392-9953789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 27
               

               Conread position:
               133-324
               

               Cow position:
               chrX:27754705-27754893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               133-415
               

               Cow position:
               chrX:32419450-32419718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               225, 54
               

               Conread position:
               133-501
               

               Cow position:
               chrX:34519004-34519368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               295, 12
               

               Conread position:
               133-525
               

               Cow position:
               chrX:37955180-37955563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               243, 12
               

               Conread position:
               134-287
               

               Cow position:
               chrX:13206231-13206379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               134-324
               

               Cow position:
               chrX:14124967-14124782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               134-371
               

               Cow position:
               chrX:2813203-2812971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               134-426
               

               Cow position:
               chrX:22564408-22564121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               208
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               134-476
               

               Cow position:
               chrX:30159712-30159378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 11
               

               Conread position:
               134-482
               

               Cow position:
               chrX:31496015-31496359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               294, 11
               

               Conread position:
               134-500
               

               Cow position:
               chrX:8641067-8641429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               308, 11
               

               Conread position:
               134-501
               

               Cow position:
               chrX:2048391-2048745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               253
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               311, 11
               

               Conread position:
               134-501
               

               Cow position:
               chrX:2274199-2274559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               294, 11
               

               Conread position:
               134-501
               

               Cow position:
               chrX:2486353-2485989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 11
               

               Conread position:
               134-501
               

               Cow position:
               chrX:3081852-3081489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 7
               

               Conread position:
               134-501
               

               Cow position:
               chrX:4622674-4622312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               215, 11
               

               Conread position:
               134-501
               

               Cow position:
               chrX:5392296-5391933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               300, 11
               

               Conread position:
               134-501
               

               Cow position:
               chrX:5406339-5406700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               134-501
               

               Cow position:
               chrX:6453976-6454337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               294, 11
               

               Conread position:
               134-501
               

               Cow position:
               chrX:9169335-9168972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               294, 7
               

               Conread position:
               134-501
               

               Cow position:
               chrX:9899065-9898700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 54
               

               Conread position:
               134-501
               

               Cow position:
               chrX:17782779-17783141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               294, 11
               

               Conread position:
               134-501
               

               Cow position:
               chrX:19399057-19399420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               215, 11
               

               Conread position:
               134-501
               

               Cow position:
               chrX:19473880-19473519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 11
               

               Conread position:
               134-501
               

               Cow position:
               chrX:22521942-22521579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               294, 11
               

               Conread position:
               134-501
               

               Cow position:
               chrX:22887938-22888300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               300, 24
               

               Conread position:
               134-501
               

               Cow position:
               chrX:24320993-24320630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               312, 11
               

               Conread position:
               134-501
               

               Cow position:
               chrX:25289400-25289037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               242, 11
               

               Conread position:
               134-501
               

               Cow position:
               chrX:26617642-26617279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 11
               

               Conread position:
               134-501
               

               Cow position:
               chrX:27423004-27422639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 13
               

               Conread position:
               134-501
               

               Cow position:
               chrX:28588250-28588612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               134-501
               

               Cow position:
               chrX:30172428-30172068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               134-501
               

               Cow position:
               chrX:30196576-30196939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               299, 11
               

               Conread position:
               134-501
               

               Cow position:
               chrX:31978562-31978201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               134-501
               

               Cow position:
               chrX:35533133-35533493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               300, 12
               

               Conread position:
               134-501
               

               Cow position:
               chrX:39730860-39730498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 11
               

               Conread position:
               134-501
               

               Cow position:
               chrX:40224963-40224601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 11
               

               Conread position:
               134-502
               

               Cow position:
               chrX:5124080-5123716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               294, 11
               

               Conread position:
               134-507
               

               Cow position:
               chrX:26506662-26506292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               294, 11
               

               Conread position:
               134-512
               

               Cow position:
               chrX:32194815-32194431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               266
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               32, 11
               

               Conread position:
               134-526
               

               Cow position:
               chrX:4329793-4329418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               315, 20
               

               Conread position:
               134-528
               

               Cow position:
               chrX:30430080-30429679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 16
               

               Conread position:
               134-531
               

               Cow position:
               chrX:2465996-2465615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 23
               

               Conread position:
               134-568
               

               Cow position:
               chrX:17265763-17265347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 56
               

               Conread position:
               135-501
               

               Cow position:
               chrX:3649542-3649166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               259
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               153, 12
               

               Conread position:
               135-501
               

               Cow position:
               chrX:21768085-21768446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 10
               

               Conread position:
               136-389
               

               Cow position:
               chrX:11976164-11975918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               136-409
               

               Cow position:
               chrX:6278151-6277872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               84, 21
               

               Conread position:
               136-425
               

               Cow position:
               chrX:39556513-39556229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 11
               

               Conread position:
               136-440
               

               Cow position:
               chrX:10146387-10146087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               136-476
               

               Cow position:
               chrX:12291640-12291976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 9
               

               Conread position:
               136-476
               

               Cow position:
               chrX:39702134-39702465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 22
               

               Conread position:
               136-490
               

               Cow position:
               chrX:44193158-44192811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               244
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               295, 11
               

               Conread position:
               136-492
               

               Cow position:
               chrX:28080071-28080419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               241, 22
               

               Conread position:
               136-500
               

               Cow position:
               chrX:6202785-6203145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 52
               

               Conread position:
               136-501
               

               Cow position:
               chrX:5320436-5320078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 11
               

               Conread position:
               136-501
               

               Cow position:
               chrX:11358783-11358423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 9
               

               Conread position:
               136-501
               

               Cow position:
               chrX:20742274-20742628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 11
               

               Conread position:
               136-501
               

               Cow position:
               chrX:26230235-26229862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 52
               

               Conread position:
               136-501
               

               Cow position:
               chrX:27305211-27305569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               291, 11
               

               Conread position:
               136-501
               

               Cow position:
               chrX:29912621-29912981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 11
               

               Conread position:
               136-502
               

               Cow position:
               chrX:9642150-9641789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 11
               

               Conread position:
               136-502
               

               Cow position:
               chrX:10866590-10866224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               191, 22
               

               Conread position:
               136-503
               

               Cow position:
               chrX:33538209-33538571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 11
               

               Conread position:
               136-504
               

               Cow position:
               chrX:44054087-44054449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               237, 12
               

               Conread position:
               136-506
               

               Cow position:
               chrX:1342991-1342622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               259
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               8, 53
               

               Conread position:
               136-507
               

               Cow position:
               chrX:16278934-16279298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               290, 11
               

               Conread position:
               136-583
               

               Cow position:
               chrX:2248075-2247617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               305
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               119, 49
               

               Conread position:
               137-446
               

               Cow position:
               chrX:516793-517093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               137-484
               

               Cow position:
               chrX:21196304-21196646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               234
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               137-491
               

               Cow position:
               chrX:12996572-12996229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               137-492
               

               Cow position:
               chrX:29049263-29049608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 39
               

               Conread position:
               138-489
               

               Cow position:
               chrX:40827461-40827115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 7
               

               Conread position:
               138-502
               

               Cow position:
               chrX:37959891-37960249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               231, 7
               

               Conread position:
               138-506
               

               Cow position:
               chrX:508870-508516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               250
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               92, 20
               

               Conread position:
               138-526
               

               Cow position:
               chrX:18468057-18468435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 49
               

               Conread position:
               138-528
               

               Cow position:
               chrX:8516885-8517271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               139-439
               

               Cow position:
               chrX:41796811-41797119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               139-476
               

               Cow position:
               chrX:28820018-28820355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               5, 29
               

               Conread position:
               141-425
               

               Cow position:
               chrX:10438651-10438374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               205
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               268, 46
               

               Conread position:
               141-429
               

               Cow position:
               chrX:29954507-29954230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               210
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               19, 47
               

               Conread position:
               141-448
               

               Cow position:
               chrX:14263487-14263190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               141-501
               

               Cow position:
               chrX:27498062-27498409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               247
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               285, 17
               

               Conread position:
               141-502
               

               Cow position:
               chrX:18769195-18769538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               248
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               139, 17
               

               Conread position:
               141-532
               

               Cow position:
               chrX:25176096-25176466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               181, 51
               

               Conread position:
               142-510
               

               Cow position:
               chrX:48855156-48854795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               70, 8
               

               Conread position:
               145-388
               

               Cow position:
               chrX:23179515-23179286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               145-456
               

               Cow position:
               chrX:28608722-28608417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               290, 9
               

               Conread position:
               145-481
               

               Cow position:
               chrX:7177952-7178273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               238
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               290, 42
               

               Conread position:
               145-490
               

               Cow position:
               chrX:45413362-45413020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               235
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               89, 7
               

               Conread position:
               145-501
               

               Cow position:
               chrX:15439345-15439007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               145-501
               

               Cow position:
               chrX:41879641-41879288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 13
               

               Conread position:
               145-533
               

               Cow position:
               chrX:33822390-33822772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 13
               

               Conread position:
               147-385
               

               Cow position:
               chrX:43075301-43075524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               15, 41
               

               Conread position:
               147-424
               

               Cow position:
               chrX:32071392-32071116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               200
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               7, 47
               

               Conread position:
               147-494
               

               Cow position:
               chrX:15140253-15139914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 69
               

               Conread position:
               147-501
               

               Cow position:
               chrX:28753049-28752698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               281, 11
               

               Conread position:
               147-525
               

               Cow position:
               chrX:34866541-34866173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 11
               

               Conread position:
               150-501
               

               Cow position:
               chrX:9011620-9011969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 37
               

               Conread position:
               151-452
               

               Cow position:
               chrX:29064713-29065006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               216
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               198, 36
               

               Conread position:
               152-501
               

               Cow position:
               chrX:40475530-40475199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               244
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               153-516
               

               Cow position:
               chrX:40541973-40542323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               153-528
               

               Cow position:
               chrX:20733941-20734312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 45
               

               Conread position:
               153-534
               

               Cow position:
               chrX:9299552-9299168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 34
               

               Conread position:
               154-506
               

               Cow position:
               chrX:4995912-4996259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               154-510
               

               Cow position:
               chrX:1960513-1960868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               12, 20
               

               Conread position:
               155-474
               

               Cow position:
               chrX:17631532-17631219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               295, 15
               

               Conread position:
               155-491
               

               Cow position:
               chrX:21625681-21625348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               155-544
               

               Cow position:
               chrX:25738347-25738746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               274
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               58, 32
               

               Conread position:
               156-344
               

               Cow position:
               chrX:3154981-3154802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               156-351
               

               Cow position:
               chrX:6654982-6654789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               8, 32
               

               Conread position:
               156-468
               

               Cow position:
               chrX:23237608-23237930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               211
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               162, 31
               

               Conread position:
               156-492
               

               Cow position:
               chrX:1018815-1018481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               224
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               57, 15
               

               Conread position:
               156-493
               

               Cow position:
               chrX:18455480-18455148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               254, 14
               

               Conread position:
               156-496
               

               Cow position:
               chrX:37105472-37105806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               233
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               284, 31
               

               Conread position:
               156-529
               

               Cow position:
               chrX:10409789-10409418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               55, 90
               

               Conread position:
               157-327
               

               Cow position:
               chrX:4498934-4499098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               157-501
               

               Cow position:
               chrX:22604138-22603797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               233
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               270, 30
               

               Conread position:
               157-501
               

               Cow position:
               chrX:27450759-27450405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               247
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               58, 16
               

               Conread position:
               157-502
               

               Cow position:
               chrX:1048194-1048539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               49, 28
               

               Conread position:
               158-410
               

               Cow position:
               chrX:20789666-20789419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               236, 22
               

               Conread position:
               158-426
               

               Cow position:
               chrX:13971938-13971673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               158-445
               

               Cow position:
               chrX:11385666-11385386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               224, 29
               

               Conread position:
               158-472
               

               Cow position:
               chrX:29602732-29602428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               223
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               135, 29
               

               Conread position:
               158-476
               

               Cow position:
               chrX:25360866-25361178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               273, 12
               

               Conread position:
               158-490
               

               Cow position:
               chrX:2524422-2524104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               227
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               147, 29
               

               Conread position:
               158-497
               

               Cow position:
               chrX:6012793-6012469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               289, 29
               

               Conread position:
               158-501
               

               Cow position:
               chrX:1056087-1055751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               158-501
               

               Cow position:
               chrX:1576962-1576621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               270, 29
               

               Conread position:
               158-501
               

               Cow position:
               chrX:7486165-7486506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               270, 29
               

               Conread position:
               158-501
               

               Cow position:
               chrX:16478216-16478557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               270, 29
               

               Conread position:
               158-501
               

               Cow position:
               chrX:29780030-29780387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               245
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               76, 35
               

               Conread position:
               158-501
               

               Cow position:
               chrX:31488817-31489154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               275, 29
               

               Conread position:
               158-523
               

               Cow position:
               chrX:4630398-4630037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 29
               

               Conread position:
               158-526
               

               Cow position:
               chrX:3145304-3145669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 29
               

               Conread position:
               158-536
               

               Cow position:
               chrX:44052203-44052586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               255
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               292, 29
               

               Conread position:
               158-547
               

               Cow position:
               chrX:21500919-21501301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               286, 29
               

               Conread position:
               159-401
               

               Cow position:
               chrX:27001870-27002110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               182
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               47, 26
               

               Conread position:
               159-501
               

               Cow position:
               chrX:16359707-16359367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               190, 28
               

               Conread position:
               159-501
               

               Cow position:
               chrX:42120605-42120945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               269, 28
               

               Conread position:
               159-507
               

               Cow position:
               chrX:47986798-47987144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               218
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               115, 28
               

               Conread position:
               159-536
               

               Cow position:
               chrX:5566537-5566147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               268
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               50, 28
               

               Conread position:
               160-501
               

               Cow position:
               chrX:1976294-1975955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               268, 27
               

               Conread position:
               160-528
               

               Cow position:
               chrX:25436628-25436265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               290, 33
               

               Conread position:
               161-345
               

               Cow position:
               chrX:28766384-28766205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               161-501
               

               Cow position:
               chrX:30965405-30965743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               267, 26
               

               Conread position:
               162-501
               

               Cow position:
               chrX:5408360-5408697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               281, 25
               

               Conread position:
               163-494
               

               Cow position:
               chrX:41434098-41433784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               229
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               55, 24
               

               Conread position:
               163-501
               

               Cow position:
               chrX:23121714-23122026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               265, 24
               

               Conread position:
               165-505
               

               Cow position:
               chrX:19636201-19636549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               251
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               124, 22
               

               Conread position:
               166-415
               

               Cow position:
               chrX:43450395-43450636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               59, 21
               

               Conread position:
               168-501
               

               Cow position:
               chrX:671692-671367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               242, 19
               

               Conread position:
               169-501
               

               Cow position:
               chrX:27594868-27594538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 18
               

               Conread position:
               169-526
               

               Cow position:
               chrX:4326177-4325825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 18
               

               Conread position:
               170-525
               

               Cow position:
               chrX:41701243-41701590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               243
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               258, 17
               

               Conread position:
               175-502
               

               Cow position:
               chrX:18024358-18024683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               258, 12
               

               Conread position:
               176-501
               

               Cow position:
               chrX:14030330-14030660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               178-431
               

               Cow position:
               chrX:5018286-5018033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               80, 22
               

               Conread position:
               188-491
               

               Cow position:
               chrX:30980565-30980259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               214
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               207, 0
               

               Conread position:
               189-501
               

               Cow position:
               chrX:19775155-19774838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               190-567
               

               Cow position:
               chrX:33614727-33615110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               249, 344
               

               Conread position:
               191-390
               

               Cow position:
               chrX:4299647-4299447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               11, 195
               

               Conread position:
               191-534
               

               Cow position:
               chrX:12033594-12033258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 160
               

               Conread position:
               192-420
               

               Cow position:
               chrX:26437068-26437292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               171
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               192-515
               

               Cow position:
               chrX:19030760-19031078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               14, 204
               

               Conread position:
               192-539
               

               Cow position:
               chrX:7809677-7809329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               234
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               167, 158
               

               Conread position:
               193-417
               

               Cow position:
               chrX:1947630-1947402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               193-418
               

               Cow position:
               chrX:20888280-20888051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               193-457
               

               Cow position:
               chrX:28879277-28879008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               28, 239
               

               Conread position:
               193-474
               

               Cow position:
               chrX:22869576-22869290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               205
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               18, 143
               

               Conread position:
               193-491
               

               Cow position:
               chrX:35680675-35680976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 34
               

               Conread position:
               193-501
               

               Cow position:
               chrX:9018974-9018661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               193-501
               

               Cow position:
               chrX:9635919-9635611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               257, 14
               

               Conread position:
               193-501
               

               Cow position:
               chrX:18078582-18078268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               193-501
               

               Cow position:
               chrX:24317397-24317708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               226
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               28, 171
               

               Conread position:
               193-501
               

               Cow position:
               chrX:25816924-25816613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 105
               

               Conread position:
               193-501
               

               Cow position:
               chrX:26764763-26764451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 239
               

               Conread position:
               193-501
               

               Cow position:
               chrX:27117299-27117609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 59
               

               Conread position:
               193-501
               

               Cow position:
               chrX:29288906-29289218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 237
               

               Conread position:
               193-501
               

               Cow position:
               chrX:32039513-32039201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 278
               

               Conread position:
               193-501
               

               Cow position:
               chrX:36250533-36250220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 59
               

               Conread position:
               193-501
               

               Cow position:
               chrX:41103121-41103430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               221
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               18, 124
               

               Conread position:
               193-525
               

               Cow position:
               chrX:11073879-11073545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 131
               

               Conread position:
               193-638
               

               Cow position:
               chrX:14924379-14924829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 148
               

               Conread position:
               197-512
               

               Cow position:
               chrX:35287994-35288307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 56
               

               Conread position:
               198-455
               

               Cow position:
               chrX:32010616-32010359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               186
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               230, 57
               

               Conread position:
               198-501
               

               Cow position:
               chrX:28646648-28646341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               13, 131
               

               Conread position:
               198-515
               

               Cow position:
               chrX:42531147-42530834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               230, 132
               

               Conread position:
               198-530
               

               Cow position:
               chrX:8103961-8103639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               13, 40
               

               Conread position:
               199-452
               

               Cow position:
               chrX:6658477-6658725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               194
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               5, 182
               

               Conread position:
               199-501
               

               Cow position:
               chrX:27095458-27095761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               234, 0
               

               Conread position:
               199-501
               

               Cow position:
               chrX:38072432-38072125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               200-425
               

               Cow position:
               chrX:42222448-42222223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               176, 170
               

               Conread position:
               200-428
               

               Cow position:
               chrX:7655261-7655033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               22, 52
               

               Conread position:
               200-431
               

               Cow position:
               chrX:30544642-30544413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               207, 0
               

               Conread position:
               200-441
               

               Cow position:
               chrX:23193249-23193010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               230, 0
               

               Conread position:
               200-446
               

               Cow position:
               chrX:11546836-11547076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               200-484
               

               Cow position:
               chrX:33884489-33884776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               212
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               13, 18
               

               Conread position:
               200-491
               

               Cow position:
               chrX:41122412-41122703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               204
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               233, 62
               

               Conread position:
               200-495
               

               Cow position:
               chrX:9391506-9391211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               110, 44
               

               Conread position:
               200-501
               

               Cow position:
               chrX:9085993-9085691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               228, 0
               

               Conread position:
               200-501
               

               Cow position:
               chrX:30822857-30823158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 114
               

               Conread position:
               200-501
               

               Cow position:
               chrX:34564642-34564942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 28
               

               Conread position:
               200-501
               

               Cow position:
               chrX:44568329-44568634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               118, 43
               

               Conread position:
               200-504
               

               Cow position:
               chrX:42733206-42733511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               228, 0
               

               Conread position:
               200-506
               

               Cow position:
               chrX:33172623-33172322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               213
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               22, 129
               

               Conread position:
               200-525
               

               Cow position:
               chrX:20801113-20801437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 0
               

               Conread position:
               200-528
               

               Cow position:
               chrX:7288171-7288504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 0
               

               Conread position:
               200-539
               

               Cow position:
               chrX:30920048-30919720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               201-510
               

               Cow position:
               chrX:40187317-40187629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               202-417
               

               Cow position:
               chrX:936421-936630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               193, 117
               

               Conread position:
               203-501
               

               Cow position:
               chrX:29875660-29875364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               12, 172
               

               Conread position:
               203-501
               

               Cow position:
               chrX:47144419-47144718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               146, 155
               

               Conread position:
               203-508
               

               Cow position:
               chrX:13359734-13360040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 45
               

               Conread position:
               204-501
               

               Cow position:
               chrX:33493074-33493374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 226
               

               Conread position:
               204-506
               

               Cow position:
               chrX:20766462-20766761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               221
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               16, 21
               

               Conread position:
               204-521
               

               Cow position:
               chrX:17122693-17122380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 95
               

               Conread position:
               205-528
               

               Cow position:
               chrX:19437740-19437424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               231
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               136, 149
               

               Conread position:
               207-329
               

               Cow position:
               chrX:3208246-3208121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               207-384
               

               Cow position:
               chrX:39511679-39511856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               207-491
               

               Cow position:
               chrX:45400694-45400408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 223
               

               Conread position:
               207-494
               

               Cow position:
               chrX:40452873-40452586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               207-501
               

               Cow position:
               chrX:4868906-4869200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               226, 153
               

               Conread position:
               207-501
               

               Cow position:
               chrX:7512839-7513133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 151
               

               Conread position:
               207-501
               

               Cow position:
               chrX:41192036-41192331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               243, 0
               

               Conread position:
               207-502
               

               Cow position:
               chrX:6044142-6043847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               239, 265
               

               Conread position:
               207-502
               

               Cow position:
               chrX:40591033-40591329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 0
               

               Conread position:
               207-506
               

               Cow position:
               chrX:39383734-39383438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               213
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               124, 112
               

               Conread position:
               207-509
               

               Cow position:
               chrX:45975905-45976210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               217
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               70, 92
               

               Conread position:
               207-530
               

               Cow position:
               chrX:29055266-29055584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               242, 121
               

               Conread position:
               208-501
               

               Cow position:
               chrX:30836722-30837015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               220, 7
               

               Conread position:
               208-526
               

               Cow position:
               chrX:17610112-17609793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 137
               

               Conread position:
               208-526
               

               Cow position:
               chrX:34993520-34993837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 8
               

               Conread position:
               208-528
               

               Cow position:
               chrX:18711883-18712201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 112
               

               Conread position:
               208-531
               

               Cow position:
               chrX:37905347-37905685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               220
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               209-331
               

               Cow position:
               chrX:38793698-38793820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               209-486
               

               Cow position:
               chrX:40100326-40100046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               42, 114
               

               Conread position:
               209-514
               

               Cow position:
               chrX:32003074-32002768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               112, 15
               

               Conread position:
               209-528
               

               Cow position:
               chrX:27323511-27323193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 116
               

               Conread position:
               209-534
               

               Cow position:
               chrX:33815498-33815821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               241, 25
               

               Conread position:
               210-491
               

               Cow position:
               chrX:46985241-46984964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               45, 33
               

               Conread position:
               210-500
               

               Cow position:
               chrX:2463346-2463059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               218, 147
               

               Conread position:
               210-501
               

               Cow position:
               chrX:9227740-9227439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               212
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               213-492
               

               Cow position:
               chrX:13404999-13404719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 210
               

               Conread position:
               213-501
               

               Cow position:
               chrX:21662457-21662738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               220, 79
               

               Conread position:
               214-371
               

               Cow position:
               chrX:22577489-22577332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               214-422
               

               Cow position:
               chrX:28104965-28105174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               113, 146
               

               Conread position:
               214-446
               

               Cow position:
               chrX:25340388-25340614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               214-464
               

               Cow position:
               chrX:12724121-12724372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 214
               

               Conread position:
               214-483
               

               Cow position:
               chrX:24975298-24975568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               214, 0
               

               Conread position:
               214-490
               

               Cow position:
               chrX:12249151-12249432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               206
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               35, 193
               

               Conread position:
               214-491
               

               Cow position:
               chrX:17743424-17743702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 44
               

               Conread position:
               214-501
               

               Cow position:
               chrX:10427890-10428182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               205
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               214-501
               

               Cow position:
               chrX:28513425-28513714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               202
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               214-501
               

               Cow position:
               chrX:34222103-34222391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               203
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               30, 262
               

               Conread position:
               214-526
               

               Cow position:
               chrX:40450280-40449968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 158
               

               Conread position:
               215-501
               

               Cow position:
               chrX:30688419-30688707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               216-425
               

               Cow position:
               chrX:3652367-3652578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               63, 22
               

               Conread position:
               216-527
               

               Cow position:
               chrX:502229-501917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 19
               

               Conread position:
               217-447
               

               Cow position:
               chrX:8795836-8796060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               217-491
               

               Cow position:
               chrX:37760207-37760485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               203
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               77, 54
               

               Conread position:
               217-495
               

               Cow position:
               chrX:32430697-32430972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               229, 34
               

               Conread position:
               217-528
               

               Cow position:
               chrX:9403460-9403773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               231
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               103, 46
               

               Conread position:
               218-448
               

               Cow position:
               chrX:40581148-40581388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               219-528
               

               Cow position:
               chrX:3807759-3808069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 170
               

               Conread position:
               219-547
               

               Cow position:
               chrX:36557148-36557468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               141, 118
               

               Conread position:
               222-501
               

               Cow position:
               chrX:37061429-37061149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 0
               

               Conread position:
               222-501
               

               Cow position:
               chrX:41488803-41488523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 0
               

               Conread position:
               222-510
               

               Cow position:
               chrX:34840407-34840120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 6
               

               Conread position:
               223-494
               

               Cow position:
               chrX:879001-878735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               227, 105
               

               Conread position:
               223-502
               

               Cow position:
               chrX:15345229-15345500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               198
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               77, 11
               

               Conread position:
               223-502
               

               Cow position:
               chrX:30531664-30531387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               211, 56
               

               Conread position:
               223-513
               

               Cow position:
               chrX:10998328-10998614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               191
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               229, 40
               

               Conread position:
               223-526
               

               Cow position:
               chrX:13851851-13852155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 106
               

               Conread position:
               223-528
               

               Cow position:
               chrX:25425503-25425802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               212, 102
               

               Conread position:
               224-345
               

               Cow position:
               chrX:20340748-20340627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               224-423
               

               Cow position:
               chrX:619455-619256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               156
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               125, 140
               

               Conread position:
               224-425
               

               Cow position:
               chrX:31249241-31249431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               152, 123
               

               Conread position:
               224-426
               

               Cow position:
               chrX:23300783-23300575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               224-444
               

               Cow position:
               chrX:31778071-31777852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               202, 0
               

               Conread position:
               224-449
               

               Cow position:
               chrX:631253-631033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               176
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               94, 27
               

               Conread position:
               224-468
               

               Cow position:
               chrX:20445784-20445540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               37, 105
               

               Conread position:
               224-471
               

               Cow position:
               chrX:19127884-19127637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 128
               

               Conread position:
               224-479
               

               Cow position:
               chrX:15306368-15306112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 205
               

               Conread position:
               224-481
               

               Cow position:
               chrX:24366588-24366328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 137
               

               Conread position:
               224-488
               

               Cow position:
               chrX:36202759-36203020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               204, 21
               

               Conread position:
               224-491
               

               Cow position:
               chrX:47211477-47211220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               103, 138
               

               Conread position:
               224-493
               

               Cow position:
               chrX:16290644-16290379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               114, 57
               

               Conread position:
               224-499
               

               Cow position:
               chrX:33003614-33003890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               75, 10
               

               Conread position:
               224-500
               

               Cow position:
               chrX:18691785-18691507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               192
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               25, 29
               

               Conread position:
               224-501
               

               Cow position:
               chrX:10416164-10415883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               110, 41
               

               Conread position:
               224-501
               

               Cow position:
               chrX:15038448-15038168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               199
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               25, 32
               

               Conread position:
               224-501
               

               Cow position:
               chrX:16734889-16735166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 108
               

               Conread position:
               224-501
               

               Cow position:
               chrX:17497460-17497738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 146
               

               Conread position:
               224-501
               

               Cow position:
               chrX:21785133-21785410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               224-501
               

               Cow position:
               chrX:22609231-22608950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               224-501
               

               Cow position:
               chrX:44396313-44396587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               201
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               34, 146
               

               Conread position:
               224-502
               

               Cow position:
               chrX:37071771-37072049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               226, 106
               

               Conread position:
               224-506
               

               Cow position:
               chrX:45200517-45200249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               224-525
               

               Cow position:
               chrX:27098648-27098360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               85, 65
               

               Conread position:
               224-527
               

               Cow position:
               chrX:23515102-23514810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               204
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               224, 96
               

               Conread position:
               224-532
               

               Cow position:
               chrX:20869867-20869570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               293, 14
               

               Conread position:
               224-542
               

               Cow position:
               chrX:15993759-15994075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               226, 109
               

               Conread position:
               225-501
               

               Cow position:
               chrX:1977861-1978131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 20
               

               Conread position:
               225-501
               

               Cow position:
               chrX:25575324-25575601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               194
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               218, 0
               

               Conread position:
               225-501
               

               Cow position:
               chrX:32871421-32871144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 145
               

               Conread position:
               226-490
               

               Cow position:
               chrX:46929703-46929439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               156, 148
               

               Conread position:
               226-501
               

               Cow position:
               chrX:24447178-24447443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               197
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               202, 0
               

               Conread position:
               226-502
               

               Cow position:
               chrX:35268262-35268536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 99
               

               Conread position:
               226-506
               

               Cow position:
               chrX:29010085-29010373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               24, 105
               

               Conread position:
               226-507
               

               Cow position:
               chrX:36891187-36891471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               110, 102
               

               Conread position:
               226-522
               

               Cow position:
               chrX:10463213-10463507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               60, 32
               

               Conread position:
               227-500
               

               Cow position:
               chrX:4665252-4664982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               227-502
               

               Cow position:
               chrX:31982261-31981985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               221, 0
               

               Conread position:
               227-534
               

               Cow position:
               chrX:27485770-27486079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 0
               

               Conread position:
               228-509
               

               Cow position:
               chrX:44961090-44961363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               222, 7
               

               Conread position:
               229-491
               

               Cow position:
               chrX:13821239-13821499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               219, 68
               

               Conread position:
               229-506
               

               Cow position:
               chrX:41594913-41594635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               224, 0
               

               Conread position:
               229-533
               

               Cow position:
               chrX:18152890-18152584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               202
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               49, 162
               

               Conread position:
               229-536
               

               Cow position:
               chrX:12853128-12852838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               233-470
               

               Cow position:
               chrX:14990123-14989885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               195, 0
               

               Conread position:
               233-501
               

               Cow position:
               chrX:13071231-13070959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               195
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               195, 0
               

               Conread position:
               233-501
               

               Cow position:
               chrX:13091791-13091519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               195
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               195, 0
               

               Conread position:
               234-402
               

               Cow position:
               chrX:18510030-18509877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               234-419
               

               Cow position:
               chrX:7444309-7444494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               42, 19
               

               Conread position:
               234-496
               

               Cow position:
               chrX:9161246-9160983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 0
               

               Conread position:
               234-501
               

               Cow position:
               chrX:18684151-18684421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               235-501
               

               Cow position:
               chrX:9153735-9154002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               192
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               193, 0
               

               Conread position:
               235-509
               

               Cow position:
               chrX:43408375-43408645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               191
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               235-572
               

               Cow position:
               chrX:1498966-1499297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               200, 97
               

               Conread position:
               236-501
               

               Cow position:
               chrX:7571281-7571545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               198
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               113, 7
               

               Conread position:
               236-501
               

               Cow position:
               chrX:39546605-39546337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 193
               

               Conread position:
               236-532
               

               Cow position:
               chrX:14121071-14120783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               202
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               130, 57
               

               Conread position:
               237-462
               

               Cow position:
               chrX:25946670-25946440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               237-476
               

               Cow position:
               chrX:151282-151520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               196, 86
               

               Conread position:
               237-501
               

               Cow position:
               chrX:26752546-26752275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               194
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               237-506
               

               Cow position:
               chrX:23666560-23666823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               212, 240
               

               Conread position:
               239-397
               

               Cow position:
               chrX:16049033-16049191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               68, 7
               

               Conread position:
               239-476
               

               Cow position:
               chrX:10905591-10905353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               81, 18
               

               Conread position:
               239-501
               

               Cow position:
               chrX:7677349-7677610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               40, 116
               

               Conread position:
               239-526
               

               Cow position:
               chrX:33631533-33631822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 0
               

               Conread position:
               240-496
               

               Cow position:
               chrX:3653988-3654246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               87, 159
               

               Conread position:
               240-501
               

               Cow position:
               chrX:8782124-8782386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               185
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               188, 0
               

               Conread position:
               240-502
               

               Cow position:
               chrX:26749499-26749236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 195
               

               Conread position:
               241-421
               

               Cow position:
               chrX:21495023-21495203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               8, 13
               

               Conread position:
               242-493
               

               Cow position:
               chrX:15718308-15718043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               85, 24
               

               Conread position:
               244-395
               

               Cow position:
               chrX:2737433-2737584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               142, 68
               

               Conread position:
               244-492
               

               Cow position:
               chrX:28558272-28558518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               200, 27
               

               Conread position:
               245-499
               

               Cow position:
               chrX:16324859-16324613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               191
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               205, 80
               

               Conread position:
               246-506
               

               Cow position:
               chrX:39294539-39294797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               202, 175
               

               Conread position:
               248-467
               

               Cow position:
               chrX:8108722-8108947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               248-501
               

               Cow position:
               chrX:20726149-20726402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 5
               

               Conread position:
               248-526
               

               Cow position:
               chrX:37066659-37066937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               204
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               26, 108
               

               Conread position:
               249-502
               

               Cow position:
               chrX:35694429-35694682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               182, 32
               

               Conread position:
               249-506
               

               Cow position:
               chrX:23819836-23819581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               74, 99
               

               Conread position:
               249-515
               

               Cow position:
               chrX:24031421-24031155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               207, 189
               

               Conread position:
               250-531
               

               Cow position:
               chrX:16229582-16229314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               204
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               89, 9
               

               Conread position:
               251-501
               

               Cow position:
               chrX:41304347-41304102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               187
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               199, 72
               

               Conread position:
               251-502
               

               Cow position:
               chrX:729473-729230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               50, 77
               

               Conread position:
               251-512
               

               Cow position:
               chrX:43217781-43218043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               19, 163
               

               Conread position:
               251-525
               

               Cow position:
               chrX:33589531-33589799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 40
               

               Conread position:
               251-533
               

               Cow position:
               chrX:11448710-11448430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               71, 54
               

               Conread position:
               252-496
               

               Cow position:
               chrX:9537934-9538175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               186
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               101, 73
               

               Conread position:
               252-501
               

               Cow position:
               chrX:14408058-14407808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               176, 0
               

               Conread position:
               252-509
               

               Cow position:
               chrX:7418647-7418903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               178, 23
               

               Conread position:
               253-434
               

               Cow position:
               chrX:24129708-24129889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               253-452
               

               Cow position:
               chrX:10583523-10583320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               58, 18
               

               Conread position:
               253-455
               

               Cow position:
               chrX:21390185-21390383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               70, 82
               

               Conread position:
               253-455
               

               Cow position:
               chrX:21415474-21415672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               253-463
               

               Cow position:
               chrX:16744579-16744790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               175, 0
               

               Conread position:
               253-481
               

               Cow position:
               chrX:5292537-5292306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               74, 119
               

               Conread position:
               253-484
               

               Cow position:
               chrX:525073-525300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               182, 13
               

               Conread position:
               253-501
               

               Cow position:
               chrX:15329046-15329295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 24
               

               Conread position:
               253-501
               

               Cow position:
               chrX:17230899-17231142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               85, 102
               

               Conread position:
               253-501
               

               Cow position:
               chrX:28866588-28866345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               193, 27
               

               Conread position:
               253-501
               

               Cow position:
               chrX:29903135-29903384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               183
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               175, 0
               

               Conread position:
               253-501
               

               Cow position:
               chrX:29915831-29915583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               181
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               193, 73
               

               Conread position:
               253-501
               

               Cow position:
               chrX:33827656-33827395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               182, 175
               

               Conread position:
               253-501
               

               Cow position:
               chrX:36513854-36514105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               253-501
               

               Cow position:
               chrX:36975233-36975486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               189
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               116, 179
               

               Conread position:
               253-501
               

               Cow position:
               chrX:37134140-37133892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               175, 104
               

               Conread position:
               253-501
               

               Cow position:
               chrX:39292350-39292101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               175, 0
               

               Conread position:
               253-508
               

               Cow position:
               chrX:1958596-1958339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 0
               

               Conread position:
               254-501
               

               Cow position:
               chrX:29777436-29777684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               180, 0
               

               Conread position:
               255-501
               

               Cow position:
               chrX:11716067-11715820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               181
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               173, 0
               

               Conread position:
               255-506
               

               Cow position:
               chrX:19400224-19400470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               192, 47
               

               Conread position:
               255-526
               

               Cow position:
               chrX:20544725-20544438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               211
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               47, 188
               

               Conread position:
               256-501
               

               Cow position:
               chrX:15120489-15120246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               256-501
               

               Cow position:
               chrX:16078063-16078310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               71, 23
               

               Conread position:
               256-519
               

               Cow position:
               chrX:42499678-42499414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 105
               

               Conread position:
               256-523
               

               Cow position:
               chrX:10960055-10960322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 119
               

               Conread position:
               256-528
               

               Cow position:
               chrX:42954810-42955086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               71, 111
               

               Conread position:
               256-529
               

               Cow position:
               chrX:11115767-11115501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               181, 23
               

               Conread position:
               257-404
               

               Cow position:
               chrX:2787069-2786922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               257-501
               

               Cow position:
               chrX:11461474-11461230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               177, 227
               

               Conread position:
               257-528
               

               Cow position:
               chrX:47747718-47747989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               118, 128
               

               Conread position:
               258-424
               

               Cow position:
               chrX:20707892-20708057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               258-431
               

               Cow position:
               chrX:4943812-4943639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               158, 171
               

               Conread position:
               258-467
               

               Cow position:
               chrX:37036929-37037132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               175, 67
               

               Conread position:
               258-500
               

               Cow position:
               chrX:35409071-35409309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               181
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               30, 171
               

               Conread position:
               259-368
               

               Cow position:
               chrX:28214683-28214791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               259-441
               

               Cow position:
               chrX:17490738-17490926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               88, 10
               

               Conread position:
               259-501
               

               Cow position:
               chrX:37764798-37764555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               177
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               169, 0
               

               Conread position:
               259-501
               

               Cow position:
               chrX:37773035-37772792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               177
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               169, 0
               

               Conread position:
               260-500
               

               Cow position:
               chrX:22538554-22538313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               168, 0
               

               Conread position:
               260-501
               

               Cow position:
               chrX:2664410-2664651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               168, 6
               

               Conread position:
               260-501
               

               Cow position:
               chrX:6558250-6558492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               168, 0
               

               Conread position:
               260-502
               

               Cow position:
               chrX:35025211-35025444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               260-525
               

               Cow position:
               chrX:6642092-6642365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               203
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               175, 35
               

               Conread position:
               260-528
               

               Cow position:
               chrX:5676285-5676034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               99, 22
               

               Conread position:
               260-531
               

               Cow position:
               chrX:12823400-12823671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               194
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               189, 233
               

               Conread position:
               261-500
               

               Cow position:
               chrX:12347278-12347519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               167, 0
               

               Conread position:
               261-501
               

               Cow position:
               chrX:34543170-34543405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               172, 16
               

               Conread position:
               261-501
               

               Cow position:
               chrX:39757434-39757675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               262-457
               

               Cow position:
               chrX:37069124-37069325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               262-471
               

               Cow position:
               chrX:833434-833223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               47, 196
               

               Conread position:
               262-501
               

               Cow position:
               chrX:42086265-42086504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               114, 108
               

               Conread position:
               263-504
               

               Cow position:
               chrX:20582435-20582675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               187, 61
               

               Conread position:
               264-526
               

               Cow position:
               chrX:17200191-17200463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               186, 0
               

               Conread position:
               265-492
               

               Cow position:
               chrX:11632053-11632280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               171
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               185, 94
               

               Conread position:
               265-501
               

               Cow position:
               chrX:20098727-20098964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               163, 0
               

               Conread position:
               265-505
               

               Cow position:
               chrX:38438893-38439122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               265-528
               

               Cow position:
               chrX:5246652-5246917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               266-422
               

               Cow position:
               chrX:15008912-15008757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               266-457
               

               Cow position:
               chrX:22819671-22819863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               83, 92
               

               Conread position:
               266-464
               

               Cow position:
               chrX:21565546-21565744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               169, 71
               

               Conread position:
               266-497
               

               Cow position:
               chrX:4632614-4632388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               165, 117
               

               Conread position:
               266-528
               

               Cow position:
               chrX:25163190-25163461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               115, 28
               

               Conread position:
               266-531
               

               Cow position:
               chrX:37906365-37906618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               184, 50
               

               Conread position:
               266-535
               

               Cow position:
               chrX:11614100-11614373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               184
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               267-501
               

               Cow position:
               chrX:22556908-22557143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               172
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               161, 0
               

               Conread position:
               268-502
               

               Cow position:
               chrX:25760988-25760755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               52, 25
               

               Conread position:
               269-501
               

               Cow position:
               chrX:5423657-5423424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               159, 0
               

               Conread position:
               270-501
               

               Cow position:
               chrX:14884552-14884320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               106, 100
               

               Conread position:
               271-501
               

               Cow position:
               chrX:44168899-44168668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               157, 0
               

               Conread position:
               272-497
               

               Cow position:
               chrX:24424986-24424754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               77, 65
               

               Conread position:
               272-501
               

               Cow position:
               chrX:27443146-27442910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               106, 75
               

               Conread position:
               272-539
               

               Cow position:
               chrX:41049527-41049787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               193
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               178, 47
               

               Conread position:
               273-506
               

               Cow position:
               chrX:34663560-34663325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               103, 53
               

               Conread position:
               273-532
               

               Cow position:
               chrX:24826747-24827006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 105
               

               Conread position:
               274-501
               

               Cow position:
               chrX:19022895-19022667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               154, 0
               

               Conread position:
               274-574
               

               Cow position:
               chrX:33685029-33684726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               154, 183
               

               Conread position:
               276-455
               

               Cow position:
               chrX:18288044-18287869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               277-501
               

               Cow position:
               chrX:42462333-42462106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               277-515
               

               Cow position:
               chrX:18990366-18990131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               66, 160
               

               Conread position:
               278-471
               

               Cow position:
               chrX:15486242-15486048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               172, 0
               

               Conread position:
               279-492
               

               Cow position:
               chrX:23414968-23414754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 7
               

               Conread position:
               279-501
               

               Cow position:
               chrX:27446114-27446333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               177, 149
               

               Conread position:
               279-528
               

               Cow position:
               chrX:35440969-35441214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               171, 74
               

               Conread position:
               284-501
               

               Cow position:
               chrX:28024687-28024905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               286-534
               

               Cow position:
               chrX:25205119-25205379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               39, 138
               

               Conread position:
               286-539
               

               Cow position:
               chrX:21815589-21815841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               21, 110
               

               Conread position:
               289-501
               

               Cow position:
               chrX:2151503-2151290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               291-489
               

               Cow position:
               chrX:7424857-7425054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               40, 71
               

               Conread position:
               291-506
               

               Cow position:
               chrX:25925113-25924896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               135, 28
               

               Conread position:
               291-526
               

               Cow position:
               chrX:8926153-8926381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               113, 34
               

               Conread position:
               291-531
               

               Cow position:
               chrX:10077971-10078211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               34, 83
               

               Conread position:
               291-534
               

               Cow position:
               chrX:1525216-1524976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               142, 102
               

               Conread position:
               292-501
               

               Cow position:
               chrX:11655515-11655719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               141, 60
               

               Conread position:
               292-501
               

               Cow position:
               chrX:31814457-31814247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               292-501
               

               Cow position:
               chrX:37957929-37958139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               292-531
               

               Cow position:
               chrX:9911342-9911105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               158, 212
               

               Conread position:
               293-448
               

               Cow position:
               chrX:617015-616860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               142, 135
               

               Conread position:
               293-501
               

               Cow position:
               chrX:2715055-2715264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               293-501
               

               Cow position:
               chrX:8590966-8591182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               84, 154
               

               Conread position:
               293-506
               

               Cow position:
               chrX:48771253-48771465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               41, 36
               

               Conread position:
               293-524
               

               Cow position:
               chrX:16514814-16514582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               142, 135
               

               Conread position:
               294-501
               

               Cow position:
               chrX:23109198-23109404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               295-501
               

               Cow position:
               chrX:10351296-10351503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               295-526
               

               Cow position:
               chrX:26626262-26626022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               295-526
               

               Cow position:
               chrX:26878091-26878328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               33, 149
               

               Conread position:
               296-489
               

               Cow position:
               chrX:30085815-30085622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               91, 27
               

               Conread position:
               296-501
               

               Cow position:
               chrX:35260412-35260618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               296-502
               

               Cow position:
               chrX:40496162-40495958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               53, 62
               

               Conread position:
               297-448
               

               Cow position:
               chrX:13430025-13429875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               297-490
               

               Cow position:
               chrX:24231834-24231638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               107, 94
               

               Conread position:
               297-529
               

               Cow position:
               chrX:8541903-8542137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               113, 192
               

               Conread position:
               298-526
               

               Cow position:
               chrX:43648314-43648091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               152, 15
               

               Conread position:
               300-501
               

               Cow position:
               chrX:48423376-48423577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               128, 16
               

               Conread position:
               301-497
               

               Cow position:
               chrX:38227652-38227452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               75, 69
               

               Conread position:
               301-501
               

               Cow position:
               chrX:22568576-22568375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               301-501
               

               Cow position:
               chrX:38963554-38963753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               132, 127
               

               Conread position:
               301-502
               

               Cow position:
               chrX:21595978-21596180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               127, 105
               

               Conread position:
               301-507
               

               Cow position:
               chrX:8483532-8483739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               127, 23
               

               Conread position:
               303-519
               

               Cow position:
               chrX:6695905-6695690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               147, 29
               

               Conread position:
               303-526
               

               Cow position:
               chrX:18988904-18989127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               147, 125
               

               Conread position:
               304-455
               

               Cow position:
               chrX:35937622-35937468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               114
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               55, 126
               

               Conread position:
               304-501
               

               Cow position:
               chrX:24588010-24587812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               304-501
               

               Cow position:
               chrX:30940625-30940823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               306-500
               

               Cow position:
               chrX:22449360-22449555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               5, 29
               

               Conread position:
               307-500
               

               Cow position:
               chrX:28110942-28111135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               142, 115
               

               Conread position:
               307-501
               

               Cow position:
               chrX:24280384-24280577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               121, 25
               

               Conread position:
               307-501
               

               Cow position:
               chrX:27404498-27404303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               307-501
               

               Cow position:
               chrX:31605131-31605326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               308-498
               

               Cow position:
               chrX:11081299-11081112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               142, 52
               

               Conread position:
               310-455
               

               Cow position:
               chrX:14901618-14901472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               311-521
               

               Cow position:
               chrX:8518523-8518734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               166
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               131, 117
               

               Conread position:
               311-523
               

               Cow position:
               chrX:18799833-18799623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               44, 18
               

               Conread position:
               313-501
               

               Cow position:
               chrX:40121550-40121363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               133, 161
               

               Conread position:
               313-525
               

               Cow position:
               chrX:41067288-41067499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               14, 25
               

               Conread position:
               313-526
               

               Cow position:
               chrX:19878488-19878700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               46, 14
               

               Conread position:
               313-534
               

               Cow position:
               chrX:4415302-4415524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               23, 94
               

               Conread position:
               314-500
               

               Cow position:
               chrX:28289742-28289929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               314-501
               

               Cow position:
               chrX:24105082-24105269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               135, 102
               

               Conread position:
               314-501
               

               Cow position:
               chrX:39316652-39316467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               314-501
               

               Cow position:
               chrX:46533066-46532878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               119, 114
               

               Conread position:
               314-515
               

               Cow position:
               chrX:40517040-40517243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               314-528
               

               Cow position:
               chrX:20957472-20957684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               136, 15
               

               Conread position:
               314-547
               

               Cow position:
               chrX:20504217-20504445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               136, 20
               

               Conread position:
               316-494
               

               Cow position:
               chrX:32623017-32623201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               111, 84
               

               Conread position:
               316-501
               

               Cow position:
               chrX:4123288-4123478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               28, 116
               

               Conread position:
               316-501
               

               Cow position:
               chrX:34797490-34797676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               316-507
               

               Cow position:
               chrX:14122295-14122102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               317-501
               

               Cow position:
               chrX:15781038-15781223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               318-487
               

               Cow position:
               chrX:45992705-45992876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               115, 42
               

               Conread position:
               318-501
               

               Cow position:
               chrX:22522373-22522189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               319-501
               

               Cow position:
               chrX:20340430-20340247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               114, 11
               

               Conread position:
               319-501
               

               Cow position:
               chrX:22771675-22771490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               319-501
               

               Cow position:
               chrX:32144702-32144521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               32, 13
               

               Conread position:
               319-501
               

               Cow position:
               chrX:40559804-40559621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               319-501
               

               Cow position:
               chrX:45373824-45373641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               319-506
               

               Cow position:
               chrX:20538737-20538922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               15, 42
               

               Conread position:
               319-528
               

               Cow position:
               chrX:46698616-46698406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               131, 13
               

               Conread position:
               319-532
               

               Cow position:
               chrX:38793953-38794167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               25, 202
               

               Conread position:
               319-534
               

               Cow position:
               chrX:5277459-5277244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               164
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               319-542
               

               Cow position:
               chrX:2146773-2146993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               131, 109
               

               Conread position:
               319-542
               

               Cow position:
               chrX:13178005-13177782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               52, 13
               

               Conread position:
               320-487
               

               Cow position:
               chrX:22139784-22139615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               320-492
               

               Cow position:
               chrX:15007691-15007518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               112, 106
               

               Conread position:
               320-501
               

               Cow position:
               chrX:45113094-45113278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               321-525
               

               Cow position:
               chrX:36294596-36294801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               100, 22
               

               Conread position:
               321-526
               

               Cow position:
               chrX:16733289-16733084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               129, 117
               

               Conread position:
               321-526
               

               Cow position:
               chrX:39125771-39125981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               35, 16
               

               Conread position:
               321-528
               

               Cow position:
               chrX:3223587-3223379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               161
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               322-496
               

               Cow position:
               chrX:5070027-5069855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               322-501
               

               Cow position:
               chrX:3596605-3596425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               322-501
               

               Cow position:
               chrX:21459143-21458963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               322-519
               

               Cow position:
               chrX:28993685-28993491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               326-501
               

               Cow position:
               chrX:12008213-12008040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               102, 7
               

               Conread position:
               326-516
               

               Cow position:
               chrX:40717406-40717590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               108, 100
               

               Conread position:
               327-528
               

               Cow position:
               chrX:20383070-20382868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               329-525
               

               Cow position:
               chrX:38642489-38642685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               119, 186
               

               Conread position:
               332-521
               

               Cow position:
               chrX:3471194-3471385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               334-501
               

               Cow position:
               chrX:6196278-6196112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               94, 20
               

               Conread position:
               334-501
               

               Cow position:
               chrX:6566548-6566716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               334-501
               

               Cow position:
               chrX:15531678-15531510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               334-502
               

               Cow position:
               chrX:16074062-16074231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               334-502
               

               Cow position:
               chrX:33707872-33708037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               335-526
               

               Cow position:
               chrX:23908700-23908508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               337-501
               

               Cow position:
               chrX:9651569-9651404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               12, 24
               

               Conread position:
               337-501
               

               Cow position:
               chrX:19333668-19333503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               337-501
               

               Cow position:
               chrX:22772132-22772297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               337-501
               

               Cow position:
               chrX:42591202-42591367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               338-507
               

               Cow position:
               chrX:31435805-31435975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               11, 20
               

               Conread position:
               340-501
               

               Cow position:
               chrX:42470456-42470295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               92, 53
               

               Conread position:
               351-534
               

               Cow position:
               chrX:28214826-28215008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               84, 19
               

               Conread position:
               355-502
               

               Cow position:
               chrX:27022313-27022451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               18, 96
               

               Conread position:
               357-492
               

               Cow position:
               chrX:31746000-31745864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               357-501
               

               Cow position:
               chrX:30093867-30093722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               360-487
               

               Cow position:
               chrX:12691159-12691031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               360-489
               

               Cow position:
               chrX:7381760-7381891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               360-492
               

               Cow position:
               chrX:8869885-8869752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               73, 68
               

               Conread position:
               360-492
               

               Cow position:
               chrX:40790030-40789899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               79, 118
               

               Conread position:
               360-501
               

               Cow position:
               chrX:2417983-2417842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               360-501
               

               Cow position:
               chrX:3157118-3157260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               360-501
               

               Cow position:
               chrX:3387606-3387748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               360-501
               

               Cow position:
               chrX:12980847-12980705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               360-501
               

               Cow position:
               chrX:25276999-25276857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               360-501
               

               Cow position:
               chrX:27749509-27749367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               360-501
               

               Cow position:
               chrX:32743045-32743180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               360-501
               

               Cow position:
               chrX:35223802-35223944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               360-501
               

               Cow position:
               chrX:38548907-38549051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               39, 68
               

               Conread position:
               360-501
               

               Cow position:
               chrX:38584227-38584369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               360-501
               

               Cow position:
               chrX:47317906-47318048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               360-510
               

               Cow position:
               chrX:2351562-2351713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               360-519
               

               Cow position:
               chrX:3161513-3161362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               132, 68
               

               Conread position:
               360-544
               

               Cow position:
               chrX:36900991-36900808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               360-637
               

               Cow position:
               chrX:41238818-41238537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               16, 10
               

               Conread position:
               361-501
               

               Cow position:
               chrX:31251766-31251907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               361-547
               

               Cow position:
               chrX:158332-158150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               89, 32
               

               Conread position:
               362-483
               

               Cow position:
               chrX:20789244-20789124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               362-501
               

               Cow position:
               chrX:18215433-18215574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               362-501
               

               Cow position:
               chrX:34238222-34238362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               73, 66
               

               Conread position:
               362-501
               

               Cow position:
               chrX:40481368-40481229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               362-525
               

               Cow position:
               chrX:3154753-3154590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               73, 66
               

               Conread position:
               362-535
               

               Cow position:
               chrX:36133709-36133534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               364-506
               

               Cow position:
               chrX:19447849-19447707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               86, 137
               

               Conread position:
               364-526
               

               Cow position:
               chrX:529302-529464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               81, 135
               

               Conread position:
               365-494
               

               Cow position:
               chrX:9252666-9252537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               85, 109
               

               Conread position:
               365-501
               

               Cow position:
               chrX:12115546-12115683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               72, 63
               

               Conread position:
               372-501
               

               Cow position:
               chrX:26728367-26728497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               98
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               375-489
               

               Cow position:
               chrX:11455552-11455437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               375-492
               

               Cow position:
               chrX:38840365-38840482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               75, 5
               

               Conread position:
               375-501
               

               Cow position:
               chrX:21862155-21862028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               375-501
               

               Cow position:
               chrX:47243790-47243661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               375-525
               

               Cow position:
               chrX:13266315-13266164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               376-500
               

               Cow position:
               chrX:4794992-4794867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               376-531
               

               Cow position:
               chrX:42841542-42841387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               74, 39
               

               Conread position:
               378-542
               

               Cow position:
               chrX:41754232-41754395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               72, 157
               

               Conread position:
               379-501
               

               Cow position:
               chrX:31385236-31385360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               382-534
               

               Cow position:
               chrX:24193639-24193789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               68, 39
               

               Conread position:
               387-532
               

               Cow position:
               chrX:41306107-41305962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               63, 114
               

               Conread position:
               392-519
               

               Cow position:
               chrX:24260081-24259953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               97
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               400-500
               

               Cow position:
               chrX:11377109-11377210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               85
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               400-526
               

               Cow position:
               chrX:27019745-27019870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               50, 100
               

               Conread position:
               412-526
               

               Cow position:
               chrX:35678769-35678885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               38, 0
               
Show alignments to all cow chromosomes.