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Cow genome map

           
Conread name:
           
Ss1.1-rpigcf0_020868.5
        

               
Conread position:
               
11-528
               

               
Cow position:
               
chr10:10964334-10963822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
378, 0
               

               
Conread position:
               
28-528
               

               
Cow position:
               
chr10:38014695-38014197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
388, 268
               

               
Conread position:
               
100-528
               

               
Cow position:
               
chr10:56392021-56392443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
296, 0
               

               
Conread position:
               
158-472
               

               
Cow position:
               
chr10:19099049-19098725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
109, 11
               

               
Conread position:
               
185-528
               

               
Cow position:
               
chr10:25479280-25478933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
26, 144
               

               
Conread position:
               
187-522
               

               
Cow position:
               
chr10:26145231-26145582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
108, 82
               

               
Conread position:
               
187-522
               

               
Cow position:
               
chr10:49146696-49146358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 231
               

               
Conread position:
               
190-496
               

               
Cow position:
               
chr10:6768548-6768845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
97, 61
               

               
Conread position:
               
195-528
               

               
Cow position:
               
chr10:35904655-35904993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
94, 20
               

               
Conread position:
               
196-526
               

               
Cow position:
               
chr10:59151693-59152032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
75, 13
               

               
Conread position:
               
196-526
               

               
Cow position:
               
chr10:67020783-67020459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
104, 13
               

               
Conread position:
               
196-528
               

               
Cow position:
               
chr10:58557353-58557027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
79, 14
               

               
Conread position:
               
197-376
               

               
Cow position:
               
chr10:37973464-37973286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
74, 12
               

               
Conread position:
               
197-528
               

               
Cow position:
               
chr10:35911594-35911916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
229, 16
               

               
Conread position:
               
197-528
               

               
Cow position:
               
chr10:48573509-48573860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 233
               

               
Conread position:
               
198-489
               

               
Cow position:
               
chr10:66592943-66593230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
198-526
               

               
Cow position:
               
chr10:29689165-29689485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
73, 15
               

               
Conread position:
               
198-527
               

               
Cow position:
               
chr10:38518468-38518799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
77, 41
               

               
Conread position:
               
199-390
               

               
Cow position:
               
chr10:32403812-32404010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
199-525
               

               
Cow position:
               
chr10:1749735-1749413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
16, 53
               

               
Conread position:
               
199-525
               

               
Cow position:
               
chr10:30613976-30613673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 43
               

               
Conread position:
               
199-528
               

               
Cow position:
               
chr10:22321677-22321354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
78, 16
               

               
Conread position:
               
199-528
               

               
Cow position:
               
chr10:37667990-37668326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 107
               

               
Conread position:
               
200-377
               

               
Cow position:
               
chr10:16547634-16547456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
78, 94
               

               
Conread position:
               
200-492
               

               
Cow position:
               
chr10:45623989-45624282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 35
               

               
Conread position:
               
200-501
               

               
Cow position:
               
chr10:43439040-43438733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
15, 128
               

               
Conread position:
               
200-526
               

               
Cow position:
               
chr10:24753321-24752987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
65, 138
               

               
Conread position:
               
200-526
               

               
Cow position:
               
chr10:38376492-38376818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 13
               

               
Conread position:
               
200-527
               

               
Cow position:
               
chr10:9341569-9341900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
76, 130
               

               
Conread position:
               
200-528
               

               
Cow position:
               
chr10:17863749-17863419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
81, 19
               

               
Conread position:
               
200-528
               

               
Cow position:
               
chr10:59572077-59571733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 204
               

               
Conread position:
               
201-528
               

               
Cow position:
               
chr10:28152212-28152548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 41
               

               
Conread position:
               
202-522
               

               
Cow position:
               
chr10:2201952-2202287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
78, 39
               

               
Conread position:
               
202-525
               

               
Cow position:
               
chr10:53974001-53973682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 123
               

               
Conread position:
               
202-526
               

               
Cow position:
               
chr10:21447750-21448064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
76, 204
               

               
Conread position:
               
202-527
               

               
Cow position:
               
chr10:10124508-10124177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
74, 103
               

               
Conread position:
               
203-451
               

               
Cow position:
               
chr10:17553341-17553090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
77, 10
               

               
Conread position:
               
203-526
               

               
Cow position:
               
chr10:33890916-33891256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
10, 218
               

               
Conread position:
               
203-528
               

               
Cow position:
               
chr10:22527738-22528072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 243
               

               
Conread position:
               
203-528
               

               
Cow position:
               
chr10:37534772-37534435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
11, 122
               

               
Conread position:
               
203-528
               

               
Cow position:
               
chr10:48741001-48741328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 11
               

               
Conread position:
               
204-526
               

               
Cow position:
               
chr10:2704364-2704043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
61, 9
               

               
Conread position:
               
205-527
               

               
Cow position:
               
chr10:49045998-49045671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
70, 48
               

               
Conread position:
               
205-528
               

               
Cow position:
               
chr10:54477258-54476938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
10, 123
               

               
Conread position:
               
205-528
               

               
Cow position:
               
chr10:56475635-56475297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 217
               

               
Conread position:
               
206-508
               

               
Cow position:
               
chr10:25260408-25260105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 73
               

               
Conread position:
               
206-528
               

               
Cow position:
               
chr10:3999069-3998735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
206-528
               

               
Cow position:
               
chr10:26731488-26731813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
9, 157
               

               
Conread position:
               
207-355
               

               
Cow position:
               
chr10:47712666-47712513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
71, 57
               

               
Conread position:
               
207-527
               

               
Cow position:
               
chr10:41984727-41985055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
68, 123
               

               
Conread position:
               
208-447
               

               
Cow position:
               
chr10:17293294-17293522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
209, 5
               

               
Conread position:
               
208-455
               

               
Cow position:
               
chr10:54819415-54819170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
70, 55
               

               
Conread position:
               
209-525
               

               
Cow position:
               
chr10:19126758-19127074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
121, 32
               

               
Conread position:
               
209-527
               

               
Cow position:
               
chr10:38513315-38513007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
140, 56
               

               
Conread position:
               
209-528
               

               
Cow position:
               
chr10:1428180-1427875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 33
               

               
Conread position:
               
210-468
               

               
Cow position:
               
chr10:48178514-48178245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
70, 41
               

               
Conread position:
               
210-472
               

               
Cow position:
               
chr10:58935012-58935281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
65, 120
               

               
Conread position:
               
210-526
               

               
Cow position:
               
chr10:2849504-2849188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
60, 130
               

               
Conread position:
               
210-526
               

               
Cow position:
               
chr10:4109753-4109423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
68, 225
               

               
Conread position:
               
210-527
               

               
Cow position:
               
chr10:33240525-33240845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
110, 235
               

               
Conread position:
               
210-528
               

               
Cow position:
               
chr10:28176227-28176558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
56, 178
               

               
Conread position:
               
213-416
               

               
Cow position:
               
chr10:29091195-29091406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
59, 114
               

               
Conread position:
               
213-503
               

               
Cow position:
               
chr10:17583884-17584183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
97, 28
               

               
Conread position:
               
213-524
               

               
Cow position:
               
chr10:30224843-30224522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
62, 115
               

               
Conread position:
               
213-527
               

               
Cow position:
               
chr10:23096627-23096946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
70, 26
               

               
Conread position:
               
213-527
               

               
Cow position:
               
chr10:45606280-45606596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
87, 49
               

               
Conread position:
               
214-524
               

               
Cow position:
               
chr10:16683658-16683978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
97, 25
               

               
Conread position:
               
214-524
               

               
Cow position:
               
chr10:69567992-69567690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
61, 77
               

               
Conread position:
               
214-525
               

               
Cow position:
               
chr10:6038191-6038501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
52, 88
               

               
Conread position:
               
214-527
               

               
Cow position:
               
chr10:34898127-34897822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
68, 33
               

               
Conread position:
               
214-527
               

               
Cow position:
               
chr10:55849496-55849189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 127
               

               
Conread position:
               
214-528
               

               
Cow position:
               
chr10:21462388-21462069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 15
               

               
Conread position:
               
214-528
               

               
Cow position:
               
chr10:24422001-24422330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
214-528
               

               
Cow position:
               
chr10:29339245-29339553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
61, 130
               

               
Conread position:
               
217-527
               

               
Cow position:
               
chr10:28038788-28039104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
32, 64
               

               
Conread position:
               
218-515
               

               
Cow position:
               
chr10:47789168-47788873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
61, 182
               

               
Conread position:
               
221-528
               

               
Cow position:
               
chr10:10135132-10134816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 109
               

               
Conread position:
               
222-485
               

               
Cow position:
               
chr10:12100398-12100674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
75, 22
               

               
Conread position:
               
222-528
               

               
Cow position:
               
chr10:13390903-13391218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 225
               

               
Conread position:
               
223-519
               

               
Cow position:
               
chr10:21015845-21016149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
52, 28
               

               
Conread position:
               
223-527
               

               
Cow position:
               
chr10:48255080-48255391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
48, 82
               

               
Conread position:
               
225-528
               

               
Cow position:
               
chr10:7366632-7366954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
47, 176
               

               
Conread position:
               
226-510
               

               
Cow position:
               
chr10:22633490-22633775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 34
               

               
Conread position:
               
228-522
               

               
Cow position:
               
chr10:46184861-46184587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
275, 37
               

               
Conread position:
               
230-527
               

               
Cow position:
               
chr10:32503586-32503280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
50, 60
               

               
Conread position:
               
247-528
               

               
Cow position:
               
chr10:33732755-33733036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
31, 89
               

               
Conread position:
               
267-418
               

               
Cow position:
               
chr10:40159758-40159903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
56, 29
               

               
Conread position:
               
270-486
               

               
Cow position:
               
chr10:32973119-32973332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
122, 5
               

               
Conread position:
               
270-523
               

               
Cow position:
               
chr10:8934557-8934320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
230, 5
               

               
Conread position:
               
271-498
               

               
Cow position:
               
chr10:15309317-15309535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
64, 13
               

               
Conread position:
               
272-472
               

               
Cow position:
               
chr10:36107331-36107530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
8, 142
               

               
Conread position:
               
272-528
               

               
Cow position:
               
chr10:2613452-2613198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 57
               

               
Conread position:
               
273-528
               

               
Cow position:
               
chr10:20095849-20095589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
274-522
               

               
Cow position:
               
chr10:38725738-38725493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 66
               

               
Conread position:
               
274-528
               

               
Cow position:
               
chr10:6505435-6505195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
274-528
               

               
Cow position:
               
chr10:8923363-8923109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 131
               

               
Conread position:
               
274-528
               

               
Cow position:
               
chr10:24560903-24561153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
9, 48
               

               
Conread position:
               
275-416
               

               
Cow position:
               
chr10:5739196-5739335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
275-444
               

               
Cow position:
               
chr10:31803399-31803567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
275-469
               

               
Cow position:
               
chr10:66321002-66321192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
275-526
               

               
Cow position:
               
chr10:35796254-35796489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
110, 72
               

               
Conread position:
               
275-527
               

               
Cow position:
               
chr10:54731094-54730847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
17, 26
               

               
Conread position:
               
275-528
               

               
Cow position:
               
chr10:2449434-2449184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
7, 188
               

               
Conread position:
               
275-528
               

               
Cow position:
               
chr10:11081046-11080793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
275-528
               

               
Cow position:
               
chr10:28178742-28178977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
224, 12
               

               
Conread position:
               
275-528
               

               
Cow position:
               
chr10:35802278-35802537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
59, 145
               

               
Conread position:
               
275-528
               

               
Cow position:
               
chr10:41941481-41941745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 150
               

               
Conread position:
               
276-448
               

               
Cow position:
               
chr10:23390230-23390405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
276-495
               

               
Cow position:
               
chr10:59455454-59455241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
155, 44
               

               
Conread position:
               
276-509
               

               
Cow position:
               
chr10:50109823-50110056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
162, 14
               

               
Conread position:
               
276-509
               

               
Cow position:
               
chr10:66003954-66003724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
208, 20
               

               
Conread position:
               
276-515
               

               
Cow position:
               
chr10:40147553-40147792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
140, 20
               

               
Conread position:
               
276-515
               

               
Cow position:
               
chr10:51069148-51068904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
86, 20
               

               
Conread position:
               
276-515
               

               
Cow position:
               
chr10:59874630-59874866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
226, 20
               

               
Conread position:
               
276-517
               

               
Cow position:
               
chr10:37512157-37512402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
86, 135
               

               
Conread position:
               
276-518
               

               
Cow position:
               
chr10:22509100-22509341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
158, 15
               

               
Conread position:
               
276-528
               

               
Cow position:
               
chr10:9083382-9083129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
93, 20
               

               
Conread position:
               
276-528
               

               
Cow position:
               
chr10:10043026-10043260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
276-528
               

               
Cow position:
               
chr10:11463586-11463835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
227, 13
               

               
Conread position:
               
276-528
               

               
Cow position:
               
chr10:23055996-23056247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
276-528
               

               
Cow position:
               
chr10:27828403-27828162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
276-528
               

               
Cow position:
               
chr10:42637313-42637051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
149, 20
               

               
Conread position:
               
276-528
               

               
Cow position:
               
chr10:44783427-44783176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
56, 14
               

               
Conread position:
               
276-528
               

               
Cow position:
               
chr10:45476142-45476383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
226, 20
               

               
Conread position:
               
277-373
               

               
Cow position:
               
chr10:37508069-37508163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
277-376
               

               
Cow position:
               
chr10:53564040-53564139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-377
               

               
Cow position:
               
chr10:25193059-25192959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-378
               

               
Cow position:
               
chr10:13158194-13158092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
277-378
               

               
Cow position:
               
chr10:24971246-24971347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-379
               

               
Cow position:
               
chr10:19679178-19679076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-379
               

               
Cow position:
               
chr10:43459973-43460074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
277-382
               

               
Cow position:
               
chr10:49862547-49862445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
277-383
               

               
Cow position:
               
chr10:46941398-46941504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-388
               

               
Cow position:
               
chr10:17602253-17602364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-388
               

               
Cow position:
               
chr10:27178572-27178465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
277-398
               

               
Cow position:
               
chr10:38223478-38223599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-400
               

               
Cow position:
               
chr10:5784175-5784291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
277-403
               

               
Cow position:
               
chr10:17388918-17388794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
277-403
               

               
Cow position:
               
chr10:23127906-23128032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-403
               

               
Cow position:
               
chr10:49634147-49634021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-403
               

               
Cow position:
               
chr10:49923293-49923419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-404
               

               
Cow position:
               
chr10:2857127-2857001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
277-405
               

               
Cow position:
               
chr10:29349694-29349564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
277-407
               

               
Cow position:
               
chr10:10634299-10634169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-408
               

               
Cow position:
               
chr10:55600077-55600207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
277-410
               

               
Cow position:
               
chr10:2695042-2694912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
277-410
               

               
Cow position:
               
chr10:26631487-26631356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
277-411
               

               
Cow position:
               
chr10:23310948-23311081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
277-411
               

               
Cow position:
               
chr10:41115985-41115852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
277-412
               

               
Cow position:
               
chr10:11047124-11047253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
277-413
               

               
Cow position:
               
chr10:704915-705051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-413
               

               
Cow position:
               
chr10:38995310-38995174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
59, 133
               

               
Conread position:
               
277-415
               

               
Cow position:
               
chr10:2185427-2185292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
277-415
               

               
Cow position:
               
chr10:40744193-40744059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
277-416
               

               
Cow position:
               
chr10:28429423-28429561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
277-416
               

               
Cow position:
               
chr10:32080352-32080217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
277-416
               

               
Cow position:
               
chr10:49253443-49253308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
277-417
               

               
Cow position:
               
chr10:31400254-31400112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
277-418
               

               
Cow position:
               
chr10:17149960-17149819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-418
               

               
Cow position:
               
chr10:30929804-30929950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
277-418
               

               
Cow position:
               
chr10:50042683-50042549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
277-419
               

               
Cow position:
               
chr10:43272964-43273107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
277-420
               

               
Cow position:
               
chr10:25822163-25822305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
84, 41
               

               
Conread position:
               
277-423
               

               
Cow position:
               
chr10:49060637-49060782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
277-424
               

               
Cow position:
               
chr10:35605130-35604982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
277-426
               

               
Cow position:
               
chr10:37426053-37426203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
277-429
               

               
Cow position:
               
chr10:36947112-36947264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
21, 138
               

               
Conread position:
               
277-432
               

               
Cow position:
               
chr10:35838957-35838806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
277-433
               

               
Cow position:
               
chr10:24902904-24903062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
277-439
               

               
Cow position:
               
chr10:2535650-2535487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
149, 12
               

               
Conread position:
               
277-442
               

               
Cow position:
               
chr10:41676330-41676495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
89, 32
               

               
Conread position:
               
277-442
               

               
Cow position:
               
chr10:42451176-42451335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
33, 53
               

               
Conread position:
               
277-446
               

               
Cow position:
               
chr10:37768383-37768215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
138, 9
               

               
Conread position:
               
277-448
               

               
Cow position:
               
chr10:34646366-34646537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
150, 126
               

               
Conread position:
               
277-448
               

               
Cow position:
               
chr10:60491186-60491347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
277-449
               

               
Cow position:
               
chr10:30746752-30746592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
277-449
               

               
Cow position:
               
chr10:52827518-52827679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
277-449
               

               
Cow position:
               
chr10:58044048-58044220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
76, 135
               

               
Conread position:
               
277-450
               

               
Cow position:
               
chr10:628065-627897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
277-450
               

               
Cow position:
               
chr10:59462213-59462043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
68, 41
               

               
Conread position:
               
277-451
               

               
Cow position:
               
chr10:13918179-13918344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
277-453
               

               
Cow position:
               
chr10:973214-973046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
140, 60
               

               
Conread position:
               
277-456
               

               
Cow position:
               
chr10:24447949-24447766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
42, 151
               

               
Conread position:
               
277-459
               

               
Cow position:
               
chr10:15425130-15424954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
277-459
               

               
Cow position:
               
chr10:17925993-17926178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
18, 127
               

               
Conread position:
               
277-459
               

               
Cow position:
               
chr10:23583490-23583669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
277-463
               

               
Cow position:
               
chr10:41760241-41760426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
104, 71
               

               
Conread position:
               
277-463
               

               
Cow position:
               
chr10:46575591-46575404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
277-466
               

               
Cow position:
               
chr10:3364102-3364289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
94, 118
               

               
Conread position:
               
277-466
               

               
Cow position:
               
chr10:33084360-33084543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
277-466
               

               
Cow position:
               
chr10:55395896-55396084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
158, 0
               

               
Conread position:
               
277-467
               

               
Cow position:
               
chr10:48407217-48407030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
277-468
               

               
Cow position:
               
chr10:46934701-46934893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
9, 15
               

               
Conread position:
               
277-469
               

               
Cow position:
               
chr10:42230873-42230680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
277-472
               

               
Cow position:
               
chr10:19539742-19539932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
277-472
               

               
Cow position:
               
chr10:31528050-31527865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
277-472
               

               
Cow position:
               
chr10:44421825-44422015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
277-472
               

               
Cow position:
               
chr10:61509863-61510053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
277-472
               

               
Cow position:
               
chr10:67581365-67581170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
154, 172
               

               
Conread position:
               
277-473
               

               
Cow position:
               
chr10:56180644-56180451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
178, 123
               

               
Conread position:
               
277-473
               

               
Cow position:
               
chr10:68182874-68183064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
277-474
               

               
Cow position:
               
chr10:23346223-23346418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
187, 46
               

               
Conread position:
               
277-475
               

               
Cow position:
               
chr10:22888734-22888931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
277-480
               

               
Cow position:
               
chr10:29379878-29380082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
141, 66
               

               
Conread position:
               
277-480
               

               
Cow position:
               
chr10:68572436-68572233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
134, 43
               

               
Conread position:
               
277-486
               

               
Cow position:
               
chr10:49947800-49948005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
199, 146
               

               
Conread position:
               
277-486
               

               
Cow position:
               
chr10:52881538-52881746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
10, 18
               

               
Conread position:
               
277-489
               

               
Cow position:
               
chr10:21422081-21422289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
149, 20
               

               
Conread position:
               
277-489
               

               
Cow position:
               
chr10:31004941-31005148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
135, 39
               

               
Conread position:
               
277-489
               

               
Cow position:
               
chr10:53179359-53179157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
63, 130
               

               
Conread position:
               
277-489
               

               
Cow position:
               
chr10:59843828-59844043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
87, 148
               

               
Conread position:
               
277-491
               

               
Cow position:
               
chr10:7383533-7383741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
277-491
               

               
Cow position:
               
chr10:8449585-8449367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
277-491
               

               
Cow position:
               
chr10:9578878-9579097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
90, 134
               

               
Conread position:
               
277-492
               

               
Cow position:
               
chr10:4151619-4151414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
277-492
               

               
Cow position:
               
chr10:34660162-34660377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
196, 137
               

               
Conread position:
               
277-492
               

               
Cow position:
               
chr10:39124213-39123997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
83, 105
               

               
Conread position:
               
277-492
               

               
Cow position:
               
chr10:46327771-46327556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-494
               

               
Cow position:
               
chr10:52120817-52120605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
277-496
               

               
Cow position:
               
chr10:13316019-13315805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
129, 165
               

               
Conread position:
               
277-497
               

               
Cow position:
               
chr10:45295062-45295277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
138, 127
               

               
Conread position:
               
277-498
               

               
Cow position:
               
chr10:64721926-64722140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
67, 41
               

               
Conread position:
               
277-501
               

               
Cow position:
               
chr10:53076194-53075980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
277-501
               

               
Cow position:
               
chr10:58451294-58451513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
277-502
               

               
Cow position:
               
chr10:762994-762777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
277-502
               

               
Cow position:
               
chr10:10750170-10750397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
211, 0
               

               
Conread position:
               
277-502
               

               
Cow position:
               
chr10:33195122-33194888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
277-502
               

               
Cow position:
               
chr10:69997720-69997945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-503
               

               
Cow position:
               
chr10:30360599-30360376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
277-507
               

               
Cow position:
               
chr10:29102265-29102481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
7, 20
               

               
Conread position:
               
277-507
               

               
Cow position:
               
chr10:33116871-33117098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 59
               

               
Conread position:
               
277-509
               

               
Cow position:
               
chr10:47690468-47690240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
277-510
               

               
Cow position:
               
chr10:6384611-6384385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
277-510
               

               
Cow position:
               
chr10:24022203-24022428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
277-510
               

               
Cow position:
               
chr10:42123512-42123745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
86, 142
               

               
Conread position:
               
277-510
               

               
Cow position:
               
chr10:61922063-61922289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
277-514
               

               
Cow position:
               
chr10:59010055-59010288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
277-516
               

               
Cow position:
               
chr10:30369742-30369967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
127, 164
               

               
Conread position:
               
277-517
               

               
Cow position:
               
chr10:11009490-11009260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
277-517
               

               
Cow position:
               
chr10:29919758-29919991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
277-518
               

               
Cow position:
               
chr10:16986412-16986171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
220, 170
               

               
Conread position:
               
277-519
               

               
Cow position:
               
chr10:6543806-6543563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
277-519
               

               
Cow position:
               
chr10:17022486-17022723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
277-519
               

               
Cow position:
               
chr10:28776431-28776191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
277-519
               

               
Cow position:
               
chr10:47651379-47651149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
137, 129
               

               
Conread position:
               
277-520
               

               
Cow position:
               
chr10:40163853-40164094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 0
               

               
Conread position:
               
277-522
               

               
Cow position:
               
chr10:6530266-6530034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
277-522
               

               
Cow position:
               
chr10:10148729-10148492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
277-522
               

               
Cow position:
               
chr10:23506411-23506649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 48
               

               
Conread position:
               
277-522
               

               
Cow position:
               
chr10:40906394-40906152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
144, 52
               

               
Conread position:
               
277-522
               

               
Cow position:
               
chr10:53365108-53364863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
150, 165
               

               
Conread position:
               
277-523
               

               
Cow position:
               
chr10:1488912-1488675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
244, 123
               

               
Conread position:
               
277-523
               

               
Cow position:
               
chr10:15115695-15115452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 129
               

               
Conread position:
               
277-523
               

               
Cow position:
               
chr10:16414495-16414749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
114, 27
               

               
Conread position:
               
277-523
               

               
Cow position:
               
chr10:43487793-43487547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
89, 64
               

               
Conread position:
               
277-523
               

               
Cow position:
               
chr10:52695646-52695892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-523
               

               
Cow position:
               
chr10:53674906-53674661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 0
               

               
Conread position:
               
277-523
               

               
Cow position:
               
chr10:57461437-57461191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
154, 135
               

               
Conread position:
               
277-524
               

               
Cow position:
               
chr10:47543156-47542922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
220, 117
               

               
Conread position:
               
277-525
               

               
Cow position:
               
chr10:6665478-6665707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
277-525
               

               
Cow position:
               
chr10:11248059-11247811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
56, 150
               

               
Conread position:
               
277-526
               

               
Cow position:
               
chr10:6852343-6852105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
135, 63
               

               
Conread position:
               
277-526
               

               
Cow position:
               
chr10:9575968-9576204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
277-526
               

               
Cow position:
               
chr10:13586784-13586547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
277-526
               

               
Cow position:
               
chr10:16645109-16645357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
220, 36
               

               
Conread position:
               
277-526
               

               
Cow position:
               
chr10:20132448-20132695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
226, 128
               

               
Conread position:
               
277-526
               

               
Cow position:
               
chr10:24756492-24756250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
277-526
               

               
Cow position:
               
chr10:28395221-28395466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 160
               

               
Conread position:
               
277-526
               

               
Cow position:
               
chr10:29166353-29166115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
197, 60
               

               
Conread position:
               
277-526
               

               
Cow position:
               
chr10:34661245-34661480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 49
               

               
Conread position:
               
277-526
               

               
Cow position:
               
chr10:37173366-37173616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
38, 44
               

               
Conread position:
               
277-526
               

               
Cow position:
               
chr10:38241159-38240917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
225, 61
               

               
Conread position:
               
277-526
               

               
Cow position:
               
chr10:42312984-42312740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
70, 128
               

               
Conread position:
               
277-526
               

               
Cow position:
               
chr10:48316867-48317123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
132, 76
               

               
Conread position:
               
277-526
               

               
Cow position:
               
chr10:50015917-50016172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
150, 130
               

               
Conread position:
               
277-526
               

               
Cow position:
               
chr10:51289330-51289091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
225, 65
               

               
Conread position:
               
277-526
               

               
Cow position:
               
chr10:54848858-54848610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
144, 77
               

               
Conread position:
               
277-526
               

               
Cow position:
               
chr10:54962635-54962893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
16, 139
               

               
Conread position:
               
277-526
               

               
Cow position:
               
chr10:62286637-62286386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
277-527
               

               
Cow position:
               
chr10:10469060-10468813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
20, 34
               

               
Conread position:
               
277-527
               

               
Cow position:
               
chr10:13311813-13311568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
137, 61
               

               
Conread position:
               
277-527
               

               
Cow position:
               
chr10:17073284-17073526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
277-527
               

               
Cow position:
               
chr10:24312809-24313056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
10, 27
               

               
Conread position:
               
277-527
               

               
Cow position:
               
chr10:24375624-24375385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
217, 55
               

               
Conread position:
               
277-527
               

               
Cow position:
               
chr10:34655028-34655280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
277-527
               

               
Cow position:
               
chr10:35792006-35791765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
277-527
               

               
Cow position:
               
chr10:38370375-38370626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
107, 19
               

               
Conread position:
               
277-527
               

               
Cow position:
               
chr10:45658225-45657977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
227, 62
               

               
Conread position:
               
277-527
               

               
Cow position:
               
chr10:50533788-50534041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
131, 77
               

               
Conread position:
               
277-527
               

               
Cow position:
               
chr10:51861998-51862241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
277-527
               

               
Cow position:
               
chr10:52113593-52113837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
277-527
               

               
Cow position:
               
chr10:53336323-53336574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
29, 45
               

               
Conread position:
               
277-527
               

               
Cow position:
               
chr10:54948055-54948304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
52, 126
               

               
Conread position:
               
277-527
               

               
Cow position:
               
chr10:55930278-55930027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
220, 178
               

               
Conread position:
               
277-527
               

               
Cow position:
               
chr10:57786419-57786172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 168
               

               
Conread position:
               
277-527
               

               
Cow position:
               
chr10:59839207-59839452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
180, 55
               

               
Conread position:
               
277-527
               

               
Cow position:
               
chr10:62353540-62353296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
6, 82
               

               
Conread position:
               
277-527
               

               
Cow position:
               
chr10:68927229-68926986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
77, 22
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:77451-77221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:721381-721133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
136, 51
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:1423911-1423666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
216, 130
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:1976237-1976489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
186, 77
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:1978591-1978828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:1996590-1996830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
160, 66
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:2974006-2974250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
95, 134
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:3362707-3362454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
104, 196
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:4164350-4164099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
68, 59
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:4184276-4184023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 131
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:5151426-5151182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 52
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:5543170-5543414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
226, 64
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:5599923-5600163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
63, 120
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:6489952-6489701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:8093237-8093482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 36
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:9656442-9656709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:9675383-9675626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:10120274-10120030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 129
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:10751910-10752146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
220, 80
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:11213192-11212947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 97
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:12486343-12486095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
142, 43
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:13765084-13765333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:15318966-15318715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
40, 129
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:15817714-15817961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 43
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:15868332-15868068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
196, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:15871792-15872040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
78, 134
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:16093290-16093047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
153, 76
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:16598769-16598518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
131, 168
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:17176113-17175866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
15, 77
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:17844847-17844595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
149, 128
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:18042260-18042016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
216, 128
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:19372256-19372506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:19549407-19549657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
223, 131
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:21082461-21082216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:22049335-22049087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
52, 56
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:22341657-22341400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
89, 32
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:22390677-22390420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:22396333-22396083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
131, 61
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:22433830-22434088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
91, 13
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:22472405-22472150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:22616560-22616807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
220, 56
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:23576626-23576374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
153, 41
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:23912432-23912665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
226, 75
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:24132743-24132986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:24276645-24276901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
69, 134
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:24732384-24732145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:24763563-24763309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 52
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:24871245-24870996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
220, 127
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:25699730-25699484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:26209167-26209427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
135, 112
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:28104999-28105251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:29252244-29251997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:29279526-29279273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
121, 105
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:31027562-31027814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 162
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:31362133-31362376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:31374010-31374263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
53, 19
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:31400818-31401063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:33067496-33067733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:34430145-34430388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
215, 128
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:35245872-35246108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
149, 31
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:35731447-35731691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:36002278-36002030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
78, 62
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:36490100-36489847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
115, 81
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:36896485-36896236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
82, 218
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:37014714-37014467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
7, 13
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:37235465-37235718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
36, 124
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:37295592-37295831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:37529185-37529434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:37913107-37913353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 105
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:39228228-39227977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:39875073-39875314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:40107180-40106938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
116, 22
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:41802812-41803062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
25, 147
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:45371136-45370886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:45770124-45769874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 31
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:45871595-45871348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
197, 112
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:46195863-46195614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 63
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:48257197-48257445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
146, 43
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:48462263-48462507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
220, 57
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:49168954-49169222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:49846855-49846607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
186, 127
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:50182972-50183217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
140, 52
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:50359992-50359753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
153, 37
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:50558844-50559096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 112
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:51306421-51306161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
163, 81
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:51696821-51696574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 70
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:51942869-51942622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
245, 79
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:52278805-52278562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 101
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:52296575-52296332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
154, 74
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:53247924-53248180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
132, 13
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:53357976-53357732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
151, 50
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:55122887-55122625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:55621774-55622014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:55733527-55733768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
37, 72
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:57059201-57059450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:58259445-58259684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
82, 20
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:59675174-59675419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:60237015-60237262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
226, 58
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:60961015-60960771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
221, 127
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:61588180-61588431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
100, 131
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:61839663-61839428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:62219914-62219655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:63884019-63883784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
216, 80
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:63940858-63940605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
34, 77
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:64182524-64182282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
216, 46
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:64285714-64285961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
158, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:65423824-65424066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:66127932-66127693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
223, 59
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:66194224-66194473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
38, 44
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:67288371-67288127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:67626915-67627161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
146, 67
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr10:68829204-68829449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
8, 18
               

               
Conread position:
               
278-417
               

               
Cow position:
               
chr10:6242434-6242569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
278-450
               

               
Cow position:
               
chr10:53405552-53405385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
278-472
               

               
Cow position:
               
chr10:63628268-63628066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
278-520
               

               
Cow position:
               
chr10:31116753-31116527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
173, 26
               

               
Conread position:
               
278-526
               

               
Cow position:
               
chr10:52046950-52046694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
278-526
               

               
Cow position:
               
chr10:64042162-64041919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
278-527
               

               
Cow position:
               
chr10:31779189-31779437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
37, 45
               

               
Conread position:
               
278-528
               

               
Cow position:
               
chr10:6436139-6435890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
220, 127
               

               
Conread position:
               
278-528
               

               
Cow position:
               
chr10:7817187-7816939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 0
               

               
Conread position:
               
278-528
               

               
Cow position:
               
chr10:19895473-19895230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
152, 75
               

               
Conread position:
               
278-528
               

               
Cow position:
               
chr10:21657500-21657255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 51
               

               
Conread position:
               
278-528
               

               
Cow position:
               
chr10:23936556-23936316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
278-528
               

               
Cow position:
               
chr10:28841037-28840788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 127
               

               
Conread position:
               
278-528
               

               
Cow position:
               
chr10:34174898-34175162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
278-528
               

               
Cow position:
               
chr10:35752883-35753125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
278-528
               

               
Cow position:
               
chr10:35862148-35862395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
215, 127
               

               
Conread position:
               
278-528
               

               
Cow position:
               
chr10:37415869-37415620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 0
               

               
Conread position:
               
278-528
               

               
Cow position:
               
chr10:37818477-37818725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 78
               

               
Conread position:
               
278-528
               

               
Cow position:
               
chr10:45378925-45379173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
215, 127
               

               
Conread position:
               
278-528
               

               
Cow position:
               
chr10:50134724-50134975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
102, 154
               

               
Conread position:
               
278-528
               

               
Cow position:
               
chr10:53934673-53934906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
193, 79
               

               
Conread position:
               
278-528
               

               
Cow position:
               
chr10:56828238-56828486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 116
               

               
Conread position:
               
279-379
               

               
Cow position:
               
chr10:59417157-59417257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
279-482
               

               
Cow position:
               
chr10:24929818-24929616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
136, 35
               

               
Conread position:
               
279-485
               

               
Cow position:
               
chr10:533610-533404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
279-500
               

               
Cow position:
               
chr10:6664112-6663886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
279-526
               

               
Cow position:
               
chr10:31534814-31534578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
38, 174
               

               
Conread position:
               
279-528
               

               
Cow position:
               
chr10:6719977-6719733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
36, 55
               

               
Conread position:
               
279-528
               

               
Cow position:
               
chr10:15462581-15462321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
279-528
               

               
Cow position:
               
chr10:28670739-28670994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
129, 181
               

               
Conread position:
               
279-528
               

               
Cow position:
               
chr10:59164029-59164263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
280-398
               

               
Cow position:
               
chr10:38205633-38205751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
280-407
               

               
Cow position:
               
chr10:46886231-46886107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
280-444
               

               
Cow position:
               
chr10:6252414-6252583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
16, 146
               

               
Conread position:
               
280-449
               

               
Cow position:
               
chr10:43586207-43586377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
280-471
               

               
Cow position:
               
chr10:6199096-6198907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
280-499
               

               
Cow position:
               
chr10:60697549-60697767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
153, 60
               

               
Conread position:
               
280-501
               

               
Cow position:
               
chr10:46492917-46493139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
146, 129
               

               
Conread position:
               
280-521
               

               
Cow position:
               
chr10:19191831-19191615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
280-522
               

               
Cow position:
               
chr10:51944439-51944196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 64
               

               
Conread position:
               
280-523
               

               
Cow position:
               
chr10:33665920-33665675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
280-526
               

               
Cow position:
               
chr10:2538168-2537928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
214, 52
               

               
Conread position:
               
280-527
               

               
Cow position:
               
chr10:8404293-8404047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
50, 84
               

               
Conread position:
               
280-527
               

               
Cow position:
               
chr10:33215874-33215633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 22
               

               
Conread position:
               
280-527
               

               
Cow position:
               
chr10:35778824-35779069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
280-527
               

               
Cow position:
               
chr10:35867941-35868165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
280-527
               

               
Cow position:
               
chr10:43509077-43508823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
75, 128
               

               
Conread position:
               
280-527
               

               
Cow position:
               
chr10:57142138-57142379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
148, 141
               

               
Conread position:
               
280-528
               

               
Cow position:
               
chr10:6235370-6235596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
280-528
               

               
Cow position:
               
chr10:10720595-10720841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
280-528
               

               
Cow position:
               
chr10:12315223-12314988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
151, 40
               

               
Conread position:
               
280-528
               

               
Cow position:
               
chr10:15293342-15293106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
217, 10
               

               
Conread position:
               
280-528
               

               
Cow position:
               
chr10:20897365-20897138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
280-528
               

               
Cow position:
               
chr10:30352930-30352679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 73
               

               
Conread position:
               
280-528
               

               
Cow position:
               
chr10:30522985-30523235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 0
               

               
Conread position:
               
280-528
               

               
Cow position:
               
chr10:42745995-42745747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
217, 134
               

               
Conread position:
               
280-528
               

               
Cow position:
               
chr10:44764418-44764673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
94, 137
               

               
Conread position:
               
280-528
               

               
Cow position:
               
chr10:47412029-47412273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
280-528
               

               
Cow position:
               
chr10:54504682-54504437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
280-528
               

               
Cow position:
               
chr10:67443042-67443274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
281-522
               

               
Cow position:
               
chr10:12392533-12392768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
73, 29
               

               
Conread position:
               
281-522
               

               
Cow position:
               
chr10:14947331-14947100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
281-526
               

               
Cow position:
               
chr10:21424604-21424849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
125, 15
               

               
Conread position:
               
281-527
               

               
Cow position:
               
chr10:32417430-32417186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
79, 128
               

               
Conread position:
               
281-527
               

               
Cow position:
               
chr10:39387530-39387292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
184, 77
               

               
Conread position:
               
281-528
               

               
Cow position:
               
chr10:11966771-11967010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
281-528
               

               
Cow position:
               
chr10:35901390-35901161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
281-528
               

               
Cow position:
               
chr10:47773804-47773561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
281-528
               

               
Cow position:
               
chr10:59663895-59664144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
74, 215
               

               
Conread position:
               
282-495
               

               
Cow position:
               
chr10:37068341-37068548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
5, 22
               

               
Conread position:
               
283-438
               

               
Cow position:
               
chr10:48282477-48282633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
283-522
               

               
Cow position:
               
chr10:6490690-6490931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
133, 37
               

               
Conread position:
               
284-527
               

               
Cow position:
               
chr10:13368425-13368181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
89, 14
               

               
Conread position:
               
285-491
               

               
Cow position:
               
chr10:60446805-60446601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 135
               

               
Conread position:
               
285-526
               

               
Cow position:
               
chr10:32583984-32583745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
123, 108
               

               
Conread position:
               
286-526
               

               
Cow position:
               
chr10:20553256-20553016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
286-528
               

               
Cow position:
               
chr10:50609618-50609373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 174
               

               
Conread position:
               
287-528
               

               
Cow position:
               
chr10:5264881-5264652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
288-451
               

               
Cow position:
               
chr10:49472446-49472610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
288-528
               

               
Cow position:
               
chr10:24781258-24781019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
292-471
               

               
Cow position:
               
chr10:9526039-9526211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
292-528
               

               
Cow position:
               
chr10:805255-805030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
158, 18
               

               
Conread position:
               
292-528
               

               
Cow position:
               
chr10:42892905-42893133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
135, 62
               

               
Conread position:
               
293-528
               

               
Cow position:
               
chr10:54469329-54469562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
294-472
               

               
Cow position:
               
chr10:52069421-52069598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
294-491
               

               
Cow position:
               
chr10:61982449-61982255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
66, 105
               

               
Conread position:
               
294-523
               

               
Cow position:
               
chr10:37645123-37644910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
294-528
               

               
Cow position:
               
chr10:24744609-24744379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
294-528
               

               
Cow position:
               
chr10:29588776-29589009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
200, 125
               

               
Conread position:
               
295-491
               

               
Cow position:
               
chr10:49038647-49038448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
299-510
               

               
Cow position:
               
chr10:48087948-48087737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
67, 48
               

               
Conread position:
               
303-501
               

               
Cow position:
               
chr10:27118914-27119108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
105, 17
               

               
Conread position:
               
303-525
               

               
Cow position:
               
chr10:59588121-59588333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
18, 93
               

               
Conread position:
               
303-528
               

               
Cow position:
               
chr10:52569646-52569423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
104, 119
               

               
Conread position:
               
304-509
               

               
Cow position:
               
chr10:66199657-66199859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
304-526
               

               
Cow position:
               
chr10:41254520-41254738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
198, 34
               

               
Conread position:
               
304-528
               

               
Cow position:
               
chr10:35767036-35767251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
201, 48
               

               
Conread position:
               
305-528
               

               
Cow position:
               
chr10:23886407-23886623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
211, 100
               

               
Conread position:
               
305-528
               

               
Cow position:
               
chr10:45965552-45965332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
188, 99
               

               
Conread position:
               
305-528
               

               
Cow position:
               
chr10:65071364-65071142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
197, 104
               

               
Conread position:
               
306-472
               

               
Cow position:
               
chr10:33881732-33881895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
306-486
               

               
Cow position:
               
chr10:49942520-49942346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
306-491
               

               
Cow position:
               
chr10:24004415-24004601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
306-521
               

               
Cow position:
               
chr10:66211240-66211456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
192, 7
               

               
Conread position:
               
306-525
               

               
Cow position:
               
chr10:4148541-4148314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
306-527
               

               
Cow position:
               
chr10:24096321-24096543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
117, 170
               

               
Conread position:
               
306-527
               

               
Cow position:
               
chr10:29188304-29188529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
98, 121
               

               
Conread position:
               
306-527
               

               
Cow position:
               
chr10:47724998-47724780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
191, 103
               

               
Conread position:
               
306-528
               

               
Cow position:
               
chr10:27716789-27717010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
163, 102
               

               
Conread position:
               
306-528
               

               
Cow position:
               
chr10:29360970-29360739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
86, 178
               

               
Conread position:
               
306-528
               

               
Cow position:
               
chr10:48513030-48513252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
307-527
               

               
Cow position:
               
chr10:747520-747297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
91, 108
               

               
Conread position:
               
307-527
               

               
Cow position:
               
chr10:38942482-38942260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
78, 103
               

               
Conread position:
               
308-473
               

               
Cow position:
               
chr10:61600194-61600355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
110, 39
               

               
Conread position:
               
308-497
               

               
Cow position:
               
chr10:12919307-12919493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
122, 46
               

               
Conread position:
               
308-501
               

               
Cow position:
               
chr10:64876569-64876377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
308-510
               

               
Cow position:
               
chr10:21923471-21923671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
193, 97
               

               
Conread position:
               
308-527
               

               
Cow position:
               
chr10:34607611-34607394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
188, 0
               

               
Conread position:
               
308-528
               

               
Cow position:
               
chr10:11576818-11576600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
190, 84
               

               
Conread position:
               
309-528
               

               
Cow position:
               
chr10:56080123-56080339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
191, 96
               

               
Conread position:
               
310-528
               

               
Cow position:
               
chr10:39303799-39304019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
314-527
               

               
Cow position:
               
chr10:45679061-45678849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
186, 88
               

               
Conread position:
               
315-528
               

               
Cow position:
               
chr10:56683162-56683377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
148, 90
               

               
Conread position:
               
317-528
               

               
Cow position:
               
chr10:22520121-22520332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
320-528
               

               
Cow position:
               
chr10:32775137-32774940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
321-527
               

               
Cow position:
               
chr10:39268631-39268431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
179, 41
               

               
Conread position:
               
321-528
               

               
Cow position:
               
chr10:29070193-29069993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
158, 79
               

               
Conread position:
               
321-528
               

               
Cow position:
               
chr10:32029796-32030001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
322-526
               

               
Cow position:
               
chr10:31466782-31466581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
176, 86
               

               
Conread position:
               
323-467
               

               
Cow position:
               
chr10:30216671-30216815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
92, 74
               

               
Conread position:
               
324-527
               

               
Cow position:
               
chr10:60722124-60722316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
325-528
               

               
Cow position:
               
chr10:2304349-2304552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
19, 74
               

               
Conread position:
               
325-528
               

               
Cow position:
               
chr10:9444984-9445182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
17, 48
               

               
Conread position:
               
329-501
               

               
Cow position:
               
chr10:331409-331236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
329-528
               

               
Cow position:
               
chr10:21037331-21037144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
79, 9
               

               
Conread position:
               
329-528
               

               
Cow position:
               
chr10:35857033-35857223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
341-528
               

               
Cow position:
               
chr10:1088046-1087852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
58, 163
               

               
Conread position:
               
341-528
               

               
Cow position:
               
chr10:6173374-6173191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
83, 68
               

               
Conread position:
               
341-528
               

               
Cow position:
               
chr10:20372108-20372296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
156, 64
               

               
Conread position:
               
341-528
               

               
Cow position:
               
chr10:35856340-35856518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
344-504
               

               
Cow position:
               
chr10:59159082-59159242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
143, 80
               

               
Conread position:
               
345-526
               

               
Cow position:
               
chr10:6516169-6516349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
152, 80
               

               
Conread position:
               
347-528
               

               
Cow position:
               
chr10:55580263-55580432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
76, 95
               

               
Conread position:
               
348-525
               

               
Cow position:
               
chr10:48408381-48408557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
73, 57
               

               
Conread position:
               
348-528
               

               
Cow position:
               
chr10:20399211-20399029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
69, 169
               

               
Conread position:
               
349-510
               

               
Cow position:
               
chr10:46718740-46718897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
60, 77
               

               
Conread position:
               
350-486
               

               
Cow position:
               
chr10:47712468-47712337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
100, 59
               

               
Conread position:
               
352-528
               

               
Cow position:
               
chr10:37444212-37444390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
353-528
               

               
Cow position:
               
chr10:36285508-36285331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
354-525
               

               
Cow position:
               
chr10:1417109-1416937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
63, 51
               

               
Conread position:
               
358-496
               

               
Cow position:
               
chr10:29090686-29090828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
24, 66
               

               
Conread position:
               
358-526
               

               
Cow position:
               
chr10:5607644-5607475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
139, 67
               

               
Conread position:
               
358-526
               

               
Cow position:
               
chr10:57457335-57457169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
358-528
               

               
Cow position:
               
chr10:9798194-9798366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
35, 71
               

               
Conread position:
               
358-528
               

               
Cow position:
               
chr10:19094646-19094478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
145, 46
               

               
Conread position:
               
358-528
               

               
Cow position:
               
chr10:41255984-41255815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
115, 41
               

               
Conread position:
               
359-528
               

               
Cow position:
               
chr10:60032571-60032743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
73, 50
               

               
Conread position:
               
361-528
               

               
Cow position:
               
chr10:37528608-37528774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
142, 44
               

               
Conread position:
               
363-528
               

               
Cow position:
               
chr10:34554097-34554257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
134, 45
               

               
Conread position:
               
365-527
               

               
Cow position:
               
chr10:22786890-22786732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
27, 17
               

               
Conread position:
               
366-510
               

               
Cow position:
               
chr10:17602590-17602726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
366-526
               

               
Cow position:
               
chr10:6986439-6986279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
65, 53
               

               
Conread position:
               
367-528
               

               
Cow position:
               
chr10:3985419-3985259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
367-528
               

               
Cow position:
               
chr10:19678864-19678703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
367-528
               

               
Cow position:
               
chr10:50200702-50200542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
130, 29
               

               
Conread position:
               
368-520
               

               
Cow position:
               
chr10:48367052-48367200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
368-528
               

               
Cow position:
               
chr10:39140172-39140011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
52, 41
               

               
Conread position:
               
369-527
               

               
Cow position:
               
chr10:15294356-15294197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
53, 40
               

               
Conread position:
               
370-528
               

               
Cow position:
               
chr10:24871878-24871720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
371-528
               

               
Cow position:
               
chr10:668868-668713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
126, 37
               

               
Conread position:
               
372-526
               

               
Cow position:
               
chr10:20505531-20505372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
372-527
               

               
Cow position:
               
chr10:48388285-48388435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
372-528
               

               
Cow position:
               
chr10:19104186-19104341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
121, 33
               

               
Conread position:
               
372-528
               

               
Cow position:
               
chr10:20735687-20735536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
131, 53
               

               
Conread position:
               
375-528
               

               
Cow position:
               
chr10:14975812-14975963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
375-528
               

               
Cow position:
               
chr10:24971628-24971777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
378-528
               

               
Cow position:
               
chr10:25045709-25045855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
382-528
               

               
Cow position:
               
chr10:20447072-20446926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
392-528
               

               
Cow position:
               
chr10:35026445-35026310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
408-526
               

               
Cow position:
               
chr10:32174682-32174565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
412-528
               

               
Cow position:
               
chr10:57736214-57736329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
419-527
               

               
Cow position:
               
chr10:60346079-60345972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
424-528
               

               
Cow position:
               
chr10:15874501-15874604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
62, 33
               

               
Conread position:
               
425-527
               

               
Cow position:
               
chr10:8923873-8923771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.