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Cow genome map

           
Conread name:
           
Ss1.1-rpigcf0_020868.5
        

               
Conread position:
               
114-523
               

               
Cow position:
               
chr17:11101482-11101899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
74, 35
               

               
Conread position:
               
182-523
               

               
Cow position:
               
chr17:3354133-3353782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
8, 33
               

               
Conread position:
               
187-455
               

               
Cow position:
               
chr17:21793613-21793883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
93, 22
               

               
Conread position:
               
190-528
               

               
Cow position:
               
chr17:20022279-20022621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 20
               

               
Conread position:
               
193-528
               

               
Cow position:
               
chr17:4299684-4300024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
24, 130
               

               
Conread position:
               
195-472
               

               
Cow position:
               
chr17:3872764-3872491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
91, 38
               

               
Conread position:
               
198-527
               

               
Cow position:
               
chr17:26162192-26162529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
18, 134
               

               
Conread position:
               
198-528
               

               
Cow position:
               
chr17:5000350-5000682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
80, 16
               

               
Conread position:
               
199-379
               

               
Cow position:
               
chr17:3182146-3182336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
41, 132
               

               
Conread position:
               
200-407
               

               
Cow position:
               
chr17:10052077-10052279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
83, 44
               

               
Conread position:
               
200-526
               

               
Cow position:
               
chr17:924108-923773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
49, 20
               

               
Conread position:
               
200-526
               

               
Cow position:
               
chr17:9565515-9565207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
12, 65
               

               
Conread position:
               
200-526
               

               
Cow position:
               
chr17:23246436-23246110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
75, 35
               

               
Conread position:
               
201-423
               

               
Cow position:
               
chr17:12556799-12556573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
77, 140
               

               
Conread position:
               
201-502
               

               
Cow position:
               
chr17:40406672-40406366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 191
               

               
Conread position:
               
201-526
               

               
Cow position:
               
chr17:19891850-19891518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
76, 12
               

               
Conread position:
               
201-528
               

               
Cow position:
               
chr17:17121888-17121571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
21, 37
               

               
Conread position:
               
201-528
               

               
Cow position:
               
chr17:41289795-41290124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
81, 115
               

               
Conread position:
               
202-528
               

               
Cow position:
               
chr17:3577773-3577438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 13
               

               
Conread position:
               
203-476
               

               
Cow position:
               
chr17:10886184-10886458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
73, 41
               

               
Conread position:
               
203-525
               

               
Cow position:
               
chr17:2034745-2034437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
203-527
               

               
Cow position:
               
chr17:23803683-23803355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
30, 63
               

               
Conread position:
               
203-528
               

               
Cow position:
               
chr17:30539052-30539355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
205-523
               

               
Cow position:
               
chr17:38362768-38363085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
70, 27
               

               
Conread position:
               
205-526
               

               
Cow position:
               
chr17:5224622-5224295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
73, 37
               

               
Conread position:
               
206-528
               

               
Cow position:
               
chr17:4601318-4601648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
74, 22
               

               
Conread position:
               
206-528
               

               
Cow position:
               
chr17:26818228-26818553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 201
               

               
Conread position:
               
208-527
               

               
Cow position:
               
chr17:37778412-37778721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
214, 39
               

               
Conread position:
               
209-526
               

               
Cow position:
               
chr17:25917127-25916794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
44, 215
               

               
Conread position:
               
210-409
               

               
Cow position:
               
chr17:12342262-12342468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
210-411
               

               
Cow position:
               
chr17:12289014-12288805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
210-423
               

               
Cow position:
               
chr17:25169290-25169076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
74, 89
               

               
Conread position:
               
210-527
               

               
Cow position:
               
chr17:21243569-21243886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 144
               

               
Conread position:
               
213-527
               

               
Cow position:
               
chr17:33998843-33999147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
99, 22
               

               
Conread position:
               
214-441
               

               
Cow position:
               
chr17:9932075-9932319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
214-523
               

               
Cow position:
               
chr17:24880957-24880646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
84, 183
               

               
Conread position:
               
214-525
               

               
Cow position:
               
chr17:24580079-24580397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 9
               

               
Conread position:
               
214-528
               

               
Cow position:
               
chr17:1040964-1040642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 86
               

               
Conread position:
               
215-526
               

               
Cow position:
               
chr17:7654254-7654557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
127, 76
               

               
Conread position:
               
215-527
               

               
Cow position:
               
chr17:23563577-23563892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 206
               

               
Conread position:
               
217-528
               

               
Cow position:
               
chr17:4968316-4968010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
218-527
               

               
Cow position:
               
chr17:20216380-20216066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
59, 109
               

               
Conread position:
               
221-523
               

               
Cow position:
               
chr17:5688163-5688456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
27, 104
               

               
Conread position:
               
221-526
               

               
Cow position:
               
chr17:7760280-7760566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
222-444
               

               
Cow position:
               
chr17:22048589-22048811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
181, 7
               

               
Conread position:
               
231-528
               

               
Cow position:
               
chr17:13143502-13143794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
48, 60
               

               
Conread position:
               
267-472
               

               
Cow position:
               
chr17:22246145-22245944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
21, 34
               

               
Conread position:
               
270-462
               

               
Cow position:
               
chr17:29961808-29961616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
155, 28
               

               
Conread position:
               
271-452
               

               
Cow position:
               
chr17:8815342-8815162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
145, 13
               

               
Conread position:
               
271-501
               

               
Cow position:
               
chr17:21755284-21755506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
272-528
               

               
Cow position:
               
chr17:24786874-24787121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
85, 47
               

               
Conread position:
               
274-452
               

               
Cow position:
               
chr17:40276888-40276701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
274-471
               

               
Cow position:
               
chr17:39606578-39606383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
168, 0
               

               
Conread position:
               
274-506
               

               
Cow position:
               
chr17:11368702-11368932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
274-506
               

               
Cow position:
               
chr17:32017744-32017961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
143, 77
               

               
Conread position:
               
274-520
               

               
Cow position:
               
chr17:36864778-36864535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
274-525
               

               
Cow position:
               
chr17:8690304-8690543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
223, 58
               

               
Conread position:
               
274-526
               

               
Cow position:
               
chr17:1063320-1063086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
87, 40
               

               
Conread position:
               
274-528
               

               
Cow position:
               
chr17:25815752-25815500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
29, 38
               

               
Conread position:
               
275-373
               

               
Cow position:
               
chr17:5027316-5027411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
275-389
               

               
Cow position:
               
chr17:39485909-39485795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
275-408
               

               
Cow position:
               
chr17:13236192-13236326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
275-442
               

               
Cow position:
               
chr17:11478916-11478747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
275-469
               

               
Cow position:
               
chr17:33155008-33155200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
275-510
               

               
Cow position:
               
chr17:10431827-10432062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
59, 134
               

               
Conread position:
               
275-527
               

               
Cow position:
               
chr17:5006341-5006590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
22, 81
               

               
Conread position:
               
275-527
               

               
Cow position:
               
chr17:11172469-11172719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
142, 24
               

               
Conread position:
               
275-528
               

               
Cow position:
               
chr17:7143013-7142760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
23, 135
               

               
Conread position:
               
275-528
               

               
Cow position:
               
chr17:18146332-18146079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
222, 134
               

               
Conread position:
               
275-528
               

               
Cow position:
               
chr17:18592589-18592340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 175
               

               
Conread position:
               
276-391
               

               
Cow position:
               
chr17:10508288-10508403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
276-456
               

               
Cow position:
               
chr17:40412728-40412554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
276-491
               

               
Cow position:
               
chr17:7693207-7692997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
276-491
               

               
Cow position:
               
chr17:25032336-25032550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
276-496
               

               
Cow position:
               
chr17:11994880-11995103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
86, 20
               

               
Conread position:
               
276-505
               

               
Cow position:
               
chr17:40421816-40421590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
276-509
               

               
Cow position:
               
chr17:39771544-39771315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
87, 22
               

               
Conread position:
               
276-515
               

               
Cow position:
               
chr17:1020416-1020653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
226, 22
               

               
Conread position:
               
276-521
               

               
Cow position:
               
chr17:25118029-25117793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
226, 20
               

               
Conread position:
               
276-522
               

               
Cow position:
               
chr17:21599538-21599779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
217, 20
               

               
Conread position:
               
276-526
               

               
Cow position:
               
chr17:38200618-38200863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
88, 20
               

               
Conread position:
               
276-527
               

               
Cow position:
               
chr17:25796192-25796439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
221, 20
               

               
Conread position:
               
276-527
               

               
Cow position:
               
chr17:27274711-27274459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
96, 22
               

               
Conread position:
               
276-528
               

               
Cow position:
               
chr17:9965882-9966132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
84, 20
               

               
Conread position:
               
276-528
               

               
Cow position:
               
chr17:14033496-14033744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
182, 102
               

               
Conread position:
               
276-528
               

               
Cow position:
               
chr17:17410438-17410185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
161, 13
               

               
Conread position:
               
276-528
               

               
Cow position:
               
chr17:18201902-18201655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
226, 20
               

               
Conread position:
               
276-528
               

               
Cow position:
               
chr17:36500947-36500703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
277-371
               

               
Cow position:
               
chr17:25348513-25348419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
95
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-379
               

               
Cow position:
               
chr17:24895218-24895116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-381
               

               
Cow position:
               
chr17:25144066-25144175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
277-385
               

               
Cow position:
               
chr17:21718852-21718960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-392
               

               
Cow position:
               
chr17:27303824-27303938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
277-393
               

               
Cow position:
               
chr17:9713197-9713313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-394
               

               
Cow position:
               
chr17:5743146-5743263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-394
               

               
Cow position:
               
chr17:22074353-22074470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-398
               

               
Cow position:
               
chr17:8108213-8108330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
277-398
               

               
Cow position:
               
chr17:37430360-37430481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-407
               

               
Cow position:
               
chr17:29075939-29076068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
277-408
               

               
Cow position:
               
chr17:42150536-42150405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-410
               

               
Cow position:
               
chr17:11306354-11306221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-411
               

               
Cow position:
               
chr17:24841840-24841706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-414
               

               
Cow position:
               
chr17:17035094-17034958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
277-416
               

               
Cow position:
               
chr17:43315144-43315280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
277-423
               

               
Cow position:
               
chr17:27440318-27440175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
277-429
               

               
Cow position:
               
chr17:21466118-21466269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
277-436
               

               
Cow position:
               
chr17:37340886-37341053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
277-440
               

               
Cow position:
               
chr17:3388968-3388808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
277-440
               

               
Cow position:
               
chr17:30213030-30212869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
132, 63
               

               
Conread position:
               
277-442
               

               
Cow position:
               
chr17:34836316-34836152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
277-445
               

               
Cow position:
               
chr17:45296554-45296394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
277-446
               

               
Cow position:
               
chr17:21053678-21053835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
277-446
               

               
Cow position:
               
chr17:33164674-33164839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
277-448
               

               
Cow position:
               
chr17:8948818-8948990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
25, 98
               

               
Conread position:
               
277-448
               

               
Cow position:
               
chr17:12959251-12959081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
277-448
               

               
Cow position:
               
chr17:18766849-18767017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
80, 148
               

               
Conread position:
               
277-448
               

               
Cow position:
               
chr17:26575078-26575255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
57, 134
               

               
Conread position:
               
277-449
               

               
Cow position:
               
chr17:25473135-25473304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
277-450
               

               
Cow position:
               
chr17:25511389-25511216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
127, 52
               

               
Conread position:
               
277-450
               

               
Cow position:
               
chr17:29995291-29995464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-450
               

               
Cow position:
               
chr17:40673515-40673342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
10, 18
               

               
Conread position:
               
277-457
               

               
Cow position:
               
chr17:21922489-21922666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
277-457
               

               
Cow position:
               
chr17:32332946-32333125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
121, 136
               

               
Conread position:
               
277-458
               

               
Cow position:
               
chr17:28814348-28814533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
277-462
               

               
Cow position:
               
chr17:17044188-17044371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
277-462
               

               
Cow position:
               
chr17:18818712-18818530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
277-466
               

               
Cow position:
               
chr17:26789564-26789378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
135, 94
               

               
Conread position:
               
277-468
               

               
Cow position:
               
chr17:20810345-20810533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
277-470
               

               
Cow position:
               
chr17:37816050-37816236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
277-472
               

               
Cow position:
               
chr17:2810777-2810578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
277-472
               

               
Cow position:
               
chr17:7590318-7590505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
277-472
               

               
Cow position:
               
chr17:9940840-9940634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
277-472
               

               
Cow position:
               
chr17:16158636-16158443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
277-472
               

               
Cow position:
               
chr17:22016944-22017135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
139, 39
               

               
Conread position:
               
277-472
               

               
Cow position:
               
chr17:22051445-22051640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
138, 123
               

               
Conread position:
               
277-474
               

               
Cow position:
               
chr17:18934404-18934207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
147, 67
               

               
Conread position:
               
277-474
               

               
Cow position:
               
chr17:21039702-21039514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
277-481
               

               
Cow position:
               
chr17:26730466-26730665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
277-483
               

               
Cow position:
               
chr17:5372382-5372588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 128
               

               
Conread position:
               
277-485
               

               
Cow position:
               
chr17:1025680-1025881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
54, 82
               

               
Conread position:
               
277-489
               

               
Cow position:
               
chr17:34790919-34791131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
78, 130
               

               
Conread position:
               
277-490
               

               
Cow position:
               
chr17:2662569-2662358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
166, 134
               

               
Conread position:
               
277-490
               

               
Cow position:
               
chr17:24751056-24750851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
65, 20
               

               
Conread position:
               
277-491
               

               
Cow position:
               
chr17:25800738-25800947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
79, 26
               

               
Conread position:
               
277-494
               

               
Cow position:
               
chr17:36814506-36814290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
141, 147
               

               
Conread position:
               
277-495
               

               
Cow position:
               
chr17:3153430-3153642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
277-495
               

               
Cow position:
               
chr17:33793308-33793093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
209, 63
               

               
Conread position:
               
277-496
               

               
Cow position:
               
chr17:15684655-15684441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
83, 131
               

               
Conread position:
               
277-500
               

               
Cow position:
               
chr17:27795798-27795570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
90, 27
               

               
Conread position:
               
277-501
               

               
Cow position:
               
chr17:2275615-2275398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
163, 140
               

               
Conread position:
               
277-501
               

               
Cow position:
               
chr17:3371761-3371558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
277-501
               

               
Cow position:
               
chr17:12946207-12946435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
127, 54
               

               
Conread position:
               
277-501
               

               
Cow position:
               
chr17:22056883-22057099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
277-501
               

               
Cow position:
               
chr17:25189430-25189211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
149, 77
               

               
Conread position:
               
277-501
               

               
Cow position:
               
chr17:26231099-26230874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
277-501
               

               
Cow position:
               
chr17:29026217-29025991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
55, 143
               

               
Conread position:
               
277-502
               

               
Cow position:
               
chr17:1466272-1466507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
87, 134
               

               
Conread position:
               
277-502
               

               
Cow position:
               
chr17:1469520-1469299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
137, 56
               

               
Conread position:
               
277-503
               

               
Cow position:
               
chr17:9824814-9824590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
277-503
               

               
Cow position:
               
chr17:39715300-39715079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
277-505
               

               
Cow position:
               
chr17:36275478-36275259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
277-506
               

               
Cow position:
               
chr17:21972985-21973215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
277-506
               

               
Cow position:
               
chr17:38263345-38263568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
148, 192
               

               
Conread position:
               
277-507
               

               
Cow position:
               
chr17:23883124-23883339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
74, 38
               

               
Conread position:
               
277-510
               

               
Cow position:
               
chr17:21757996-21758224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
277-513
               

               
Cow position:
               
chr17:25342596-25342829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
223, 131
               

               
Conread position:
               
277-514
               

               
Cow position:
               
chr17:20848667-20848432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
220, 80
               

               
Conread position:
               
277-514
               

               
Cow position:
               
chr17:22128067-22127838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
277-516
               

               
Cow position:
               
chr17:21489480-21489716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
220, 95
               

               
Conread position:
               
277-516
               

               
Cow position:
               
chr17:25594546-25594796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
277-520
               

               
Cow position:
               
chr17:32138279-32138511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
277-521
               

               
Cow position:
               
chr17:17406280-17406042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
21, 53
               

               
Conread position:
               
277-523
               

               
Cow position:
               
chr17:5900514-5900268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
145, 173
               

               
Conread position:
               
277-523
               

               
Cow position:
               
chr17:9746657-9746416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
277-523
               

               
Cow position:
               
chr17:11912358-11912596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 145
               

               
Conread position:
               
277-523
               

               
Cow position:
               
chr17:21292903-21293143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
226, 15
               

               
Conread position:
               
277-523
               

               
Cow position:
               
chr17:25128208-25128447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
277-523
               

               
Cow position:
               
chr17:26765168-26764918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 122
               

               
Conread position:
               
277-523
               

               
Cow position:
               
chr17:30665414-30665171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
220, 12
               

               
Conread position:
               
277-523
               

               
Cow position:
               
chr17:34078966-34079202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
220, 131
               

               
Conread position:
               
277-524
               

               
Cow position:
               
chr17:1035452-1035700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
218, 131
               

               
Conread position:
               
277-524
               

               
Cow position:
               
chr17:1562642-1562871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
277-524
               

               
Cow position:
               
chr17:11215750-11215991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
154, 9
               

               
Conread position:
               
277-524
               

               
Cow position:
               
chr17:35573897-35573663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
277-524
               

               
Cow position:
               
chr17:36330814-36331065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 12
               

               
Conread position:
               
277-525
               

               
Cow position:
               
chr17:1634347-1634590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 171
               

               
Conread position:
               
277-525
               

               
Cow position:
               
chr17:13922634-13922378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 140
               

               
Conread position:
               
277-525
               

               
Cow position:
               
chr17:21738729-21738980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
219, 128
               

               
Conread position:
               
277-526
               

               
Cow position:
               
chr17:908885-908644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
277-526
               

               
Cow position:
               
chr17:4105849-4106088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 117
               

               
Conread position:
               
277-526
               

               
Cow position:
               
chr17:4121585-4121824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
277-526
               

               
Cow position:
               
chr17:11156349-11156591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
277-526
               

               
Cow position:
               
chr17:11618729-11618482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
220, 77
               

               
Conread position:
               
277-526
               

               
Cow position:
               
chr17:15102749-15102986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
277-526
               

               
Cow position:
               
chr17:20157752-20157509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
61, 71
               

               
Conread position:
               
277-526
               

               
Cow position:
               
chr17:20990045-20990296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 101
               

               
Conread position:
               
277-526
               

               
Cow position:
               
chr17:21325477-21325231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
277-526
               

               
Cow position:
               
chr17:21959543-21959789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
223, 142
               

               
Conread position:
               
277-526
               

               
Cow position:
               
chr17:27429710-27429480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
143, 62
               

               
Conread position:
               
277-526
               

               
Cow position:
               
chr17:32278762-32279007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
60, 49
               

               
Conread position:
               
277-526
               

               
Cow position:
               
chr17:32280810-32280565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
60, 49
               

               
Conread position:
               
277-526
               

               
Cow position:
               
chr17:39857530-39857291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
222, 22
               

               
Conread position:
               
277-527
               

               
Cow position:
               
chr17:5768049-5767811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 43
               

               
Conread position:
               
277-527
               

               
Cow position:
               
chr17:7803030-7803277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
218, 131
               

               
Conread position:
               
277-527
               

               
Cow position:
               
chr17:7810610-7810837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
277-527
               

               
Cow position:
               
chr17:10561779-10561527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
79, 120
               

               
Conread position:
               
277-527
               

               
Cow position:
               
chr17:13940177-13940423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
68, 61
               

               
Conread position:
               
277-527
               

               
Cow position:
               
chr17:22806398-22806639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
277-527
               

               
Cow position:
               
chr17:24004516-24004280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
277-527
               

               
Cow position:
               
chr17:24822006-24821763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 79
               

               
Conread position:
               
277-527
               

               
Cow position:
               
chr17:30529400-30529644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
221, 142
               

               
Conread position:
               
277-527
               

               
Cow position:
               
chr17:32273542-32273789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 129
               

               
Conread position:
               
277-527
               

               
Cow position:
               
chr17:32366438-32366185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
38, 50
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:265814-265573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:979022-979260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
226, 59
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:1060901-1061163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:1114033-1113781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
226, 128
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:1493004-1493259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
221, 131
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:5422924-5423173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 168
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:6318722-6318961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
140, 116
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:6329260-6329008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
220, 142
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:6423909-6423657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:6566621-6566363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
84, 16
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:6848939-6848701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
239, 61
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:8544449-8544202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
90, 16
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:9117789-9117543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:9697537-9697802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
84, 161
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:9854121-9853886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:9911902-9911661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 63
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:10458787-10459041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
91, 152
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:11215087-11215333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
221, 76
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:11831970-11832223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
128, 158
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:12325620-12325851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:12536320-12536572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:13243905-13244144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:14003970-14003714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:14025765-14026020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
72, 150
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:15340607-15340856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 129
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:15664821-15664564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
138, 13
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:17059568-17059329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:18108943-18109190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 10
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:18473307-18473075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:18720302-18720557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
224, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:18860579-18860828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
221, 12
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:20874541-20874286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
159, 115
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:20884668-20884419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
10, 20
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:20932476-20932225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
216, 132
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:20992897-20993144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 88
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:21003685-21003932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:21114809-21115054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 147
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:21335547-21335798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:21680924-21680668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
92, 62
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:22564329-22564077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
68, 27
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:24077546-24077298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
140, 62
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:24587769-24587518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:24974090-24973848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
43, 136
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:25901345-25901093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:26000262-26000013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
133, 77
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:27142890-27142656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
88, 70
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:28468267-28468032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:29084319-29084086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:29157561-29157313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 63
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:30728649-30728418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:31037232-31037484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:31856816-31856559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
220, 14
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:32027307-32027562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:32349212-32348970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:32418971-32419218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 140
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:32989621-32989378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:32993479-32993722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:33657924-33658174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 27
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:34751261-34751509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:35126849-35126604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:36791271-36791031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
138, 68
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:37699205-37699460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
218, 131
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:40741796-40741542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
88, 19
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:40771975-40771731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
133, 40
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr17:40852117-40851879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
40, 95
               

               
Conread position:
               
278-402
               

               
Cow position:
               
chr17:20392292-20392171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
278-424
               

               
Cow position:
               
chr17:27665963-27666110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
136, 70
               

               
Conread position:
               
278-441
               

               
Cow position:
               
chr17:8823456-8823292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
278-522
               

               
Cow position:
               
chr17:25513979-25514221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
278-522
               

               
Cow position:
               
chr17:40288856-40289096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
220, 141
               

               
Conread position:
               
278-524
               

               
Cow position:
               
chr17:40250564-40250326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
278-525
               

               
Cow position:
               
chr17:28284890-28285131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
134, 28
               

               
Conread position:
               
278-526
               

               
Cow position:
               
chr17:17060539-17060781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
159, 21
               

               
Conread position:
               
278-526
               

               
Cow position:
               
chr17:20071955-20072183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
278-526
               

               
Cow position:
               
chr17:25502254-25502008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 72
               

               
Conread position:
               
278-526
               

               
Cow position:
               
chr17:27048299-27048057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
219, 57
               

               
Conread position:
               
278-526
               

               
Cow position:
               
chr17:33288513-33288756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
278-528
               

               
Cow position:
               
chr17:3467896-3467663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
278-528
               

               
Cow position:
               
chr17:8079456-8079213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
278-528
               

               
Cow position:
               
chr17:11397809-11397566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
115, 44
               

               
Conread position:
               
278-528
               

               
Cow position:
               
chr17:22032551-22032794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
65, 130
               

               
Conread position:
               
278-528
               

               
Cow position:
               
chr17:24554140-24553904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 124
               

               
Conread position:
               
278-528
               

               
Cow position:
               
chr17:25612234-25611985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
278-528
               

               
Cow position:
               
chr17:29715061-29715290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
132, 54
               

               
Conread position:
               
278-528
               

               
Cow position:
               
chr17:30713487-30713245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 29
               

               
Conread position:
               
278-528
               

               
Cow position:
               
chr17:32471637-32471894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
279-418
               

               
Cow position:
               
chr17:3097513-3097651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
78, 111
               

               
Conread position:
               
279-433
               

               
Cow position:
               
chr17:7959323-7959170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
79, 34
               

               
Conread position:
               
279-468
               

               
Cow position:
               
chr17:35051757-35051563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
58, 151
               

               
Conread position:
               
279-505
               

               
Cow position:
               
chr17:38833186-38832962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
77, 84
               

               
Conread position:
               
279-509
               

               
Cow position:
               
chr17:5850205-5850431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
73, 89
               

               
Conread position:
               
279-523
               

               
Cow position:
               
chr17:24824385-24824150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
279-525
               

               
Cow position:
               
chr17:24883428-24883667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
279-526
               

               
Cow position:
               
chr17:35338778-35339017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
279-527
               

               
Cow position:
               
chr17:30718275-30718522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
219, 155
               

               
Conread position:
               
279-527
               

               
Cow position:
               
chr17:39736317-39736078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
279-528
               

               
Cow position:
               
chr17:11280957-11281211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
86, 74
               

               
Conread position:
               
279-528
               

               
Cow position:
               
chr17:18495377-18495624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 68
               

               
Conread position:
               
279-528
               

               
Cow position:
               
chr17:24559433-24559189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
218, 130
               

               
Conread position:
               
279-528
               

               
Cow position:
               
chr17:24773822-24773580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
74, 110
               

               
Conread position:
               
279-528
               

               
Cow position:
               
chr17:40331907-40331661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
169, 61
               

               
Conread position:
               
280-380
               

               
Cow position:
               
chr17:12215115-12215216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
280-390
               

               
Cow position:
               
chr17:42697436-42697326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
280-390
               

               
Cow position:
               
chr17:42744598-42744488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
280-446
               

               
Cow position:
               
chr17:18848016-18848183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
280-472
               

               
Cow position:
               
chr17:4213885-4213698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
66, 124
               

               
Conread position:
               
280-472
               

               
Cow position:
               
chr17:25126492-25126304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
280-492
               

               
Cow position:
               
chr17:40639088-40638882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
280-519
               

               
Cow position:
               
chr17:23516800-23517037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
280-519
               

               
Cow position:
               
chr17:27202904-27203139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
217, 133
               

               
Conread position:
               
280-524
               

               
Cow position:
               
chr17:16371398-16371155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
217, 134
               

               
Conread position:
               
280-526
               

               
Cow position:
               
chr17:21495513-21495274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
151, 55
               

               
Conread position:
               
280-526
               

               
Cow position:
               
chr17:25616391-25616157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
280-527
               

               
Cow position:
               
chr17:27058415-27058656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
280-528
               

               
Cow position:
               
chr17:3503723-3503478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
280-528
               

               
Cow position:
               
chr17:4225362-4225597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
280-528
               

               
Cow position:
               
chr17:7698189-7697953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
217, 49
               

               
Conread position:
               
280-528
               

               
Cow position:
               
chr17:11664441-11664692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 198
               

               
Conread position:
               
280-528
               

               
Cow position:
               
chr17:23101077-23101311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 123
               

               
Conread position:
               
281-443
               

               
Cow position:
               
chr17:24163177-24163018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
133, 72
               

               
Conread position:
               
281-498
               

               
Cow position:
               
chr17:12510838-12511049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
202, 45
               

               
Conread position:
               
281-523
               

               
Cow position:
               
chr17:17682770-17683002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
163, 59
               

               
Conread position:
               
281-527
               

               
Cow position:
               
chr17:14848405-14848630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
131, 42
               

               
Conread position:
               
281-527
               

               
Cow position:
               
chr17:33275609-33275850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
149, 77
               

               
Conread position:
               
281-528
               

               
Cow position:
               
chr17:12591315-12591063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
281-528
               

               
Cow position:
               
chr17:20800953-20800712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
220, 15
               

               
Conread position:
               
281-528
               

               
Cow position:
               
chr17:25097596-25097359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
281-528
               

               
Cow position:
               
chr17:33933602-33933852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
283-524
               

               
Cow position:
               
chr17:45726287-45726055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
122, 81
               

               
Conread position:
               
283-527
               

               
Cow position:
               
chr17:1410099-1410342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 141
               

               
Conread position:
               
284-528
               

               
Cow position:
               
chr17:20780653-20780407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
54, 130
               

               
Conread position:
               
286-449
               

               
Cow position:
               
chr17:7577733-7577565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
286-526
               

               
Cow position:
               
chr17:20090501-20090723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
287-523
               

               
Cow position:
               
chr17:11171926-11171697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
55, 9
               

               
Conread position:
               
288-526
               

               
Cow position:
               
chr17:23798414-23798179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
289-407
               

               
Cow position:
               
chr17:565245-565363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
289-444
               

               
Cow position:
               
chr17:7851220-7851067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
136, 116
               

               
Conread position:
               
289-527
               

               
Cow position:
               
chr17:41891928-41892167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
123, 111
               

               
Conread position:
               
292-528
               

               
Cow position:
               
chr17:31230993-31231215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
292-528
               

               
Cow position:
               
chr17:38647191-38646956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 164
               

               
Conread position:
               
293-528
               

               
Cow position:
               
chr17:3782172-3781941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
135, 61
               

               
Conread position:
               
294-486
               

               
Cow position:
               
chr17:9056570-9056762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
132, 105
               

               
Conread position:
               
302-423
               

               
Cow position:
               
chr17:32192733-32192854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
303-528
               

               
Cow position:
               
chr17:14762003-14762223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
198, 117
               

               
Conread position:
               
304-527
               

               
Cow position:
               
chr17:8836830-8837052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
120, 40
               

               
Conread position:
               
304-528
               

               
Cow position:
               
chr17:14060656-14060880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
123, 68
               

               
Conread position:
               
304-528
               

               
Cow position:
               
chr17:21628596-21628373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
193, 65
               

               
Conread position:
               
305-497
               

               
Cow position:
               
chr17:21478805-21478995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
98, 42
               

               
Conread position:
               
305-510
               

               
Cow position:
               
chr17:22775491-22775286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
139, 100
               

               
Conread position:
               
305-520
               

               
Cow position:
               
chr17:21744048-21743842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
305-528
               

               
Cow position:
               
chr17:552853-553064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
192, 89
               

               
Conread position:
               
305-528
               

               
Cow position:
               
chr17:28540145-28539925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
192, 39
               

               
Conread position:
               
305-528
               

               
Cow position:
               
chr17:34596057-34595840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
34, 44
               

               
Conread position:
               
306-417
               

               
Cow position:
               
chr17:13478709-13478820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
306-492
               

               
Cow position:
               
chr17:27730659-27730472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
76, 124
               

               
Conread position:
               
306-526
               

               
Cow position:
               
chr17:24490657-24490423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
306-527
               

               
Cow position:
               
chr17:38615076-38614853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
192, 102
               

               
Conread position:
               
306-528
               

               
Cow position:
               
chr17:7137095-7136878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
197, 102
               

               
Conread position:
               
306-528
               

               
Cow position:
               
chr17:24928591-24928370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
197, 95
               

               
Conread position:
               
306-528
               

               
Cow position:
               
chr17:26233714-26233930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
192, 102
               

               
Conread position:
               
306-528
               

               
Cow position:
               
chr17:33410893-33411126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
43, 105
               

               
Conread position:
               
307-523
               

               
Cow position:
               
chr17:1275638-1275425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
198, 34
               

               
Conread position:
               
307-528
               

               
Cow position:
               
chr17:1256385-1256604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
85, 94
               

               
Conread position:
               
307-528
               

               
Cow position:
               
chr17:11277913-11278137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
308-525
               

               
Cow position:
               
chr17:14652666-14652881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
308-525
               

               
Cow position:
               
chr17:21917759-21917977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
190, 70
               

               
Conread position:
               
308-526
               

               
Cow position:
               
chr17:24149298-24149079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
190, 97
               

               
Conread position:
               
308-527
               

               
Cow position:
               
chr17:12108918-12108702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
180, 97
               

               
Conread position:
               
313-528
               

               
Cow position:
               
chr17:24752212-24752417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
187, 31
               

               
Conread position:
               
315-526
               

               
Cow position:
               
chr17:12447285-12447504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
25, 118
               

               
Conread position:
               
315-528
               

               
Cow position:
               
chr17:5514867-5514655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
187, 110
               

               
Conread position:
               
315-528
               

               
Cow position:
               
chr17:18490647-18490431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
107, 93
               

               
Conread position:
               
320-528
               

               
Cow position:
               
chr17:7132337-7132555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
320-528
               

               
Cow position:
               
chr17:25541715-25541917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
88, 145
               

               
Conread position:
               
323-426
               

               
Cow position:
               
chr17:22223798-22223694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
329-528
               

               
Cow position:
               
chr17:10020698-10020899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
164, 0
               

               
Conread position:
               
330-528
               

               
Cow position:
               
chr17:20870006-20870202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
90, 74
               

               
Conread position:
               
333-528
               

               
Cow position:
               
chr17:484687-484492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
336-528
               

               
Cow position:
               
chr17:12059007-12059198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
336-528
               

               
Cow position:
               
chr17:15333624-15333816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-469
               

               
Cow position:
               
chr17:36083670-36083803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
342-484
               

               
Cow position:
               
chr17:20269816-20269671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
342-527
               

               
Cow position:
               
chr17:267505-267691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
161, 72
               

               
Conread position:
               
343-528
               

               
Cow position:
               
chr17:20839487-20839665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
159, 61
               

               
Conread position:
               
344-516
               

               
Cow position:
               
chr17:5733390-5733553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
159, 63
               

               
Conread position:
               
344-527
               

               
Cow position:
               
chr17:32009362-32009540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
344-528
               

               
Cow position:
               
chr17:6624334-6624154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
157, 77
               

               
Conread position:
               
345-528
               

               
Cow position:
               
chr17:17266814-17266998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
76, 65
               

               
Conread position:
               
348-510
               

               
Cow position:
               
chr17:27765349-27765184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
349-528
               

               
Cow position:
               
chr17:1311423-1311244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
149, 59
               

               
Conread position:
               
350-528
               

               
Cow position:
               
chr17:9778315-9778142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
147, 58
               

               
Conread position:
               
351-527
               

               
Cow position:
               
chr17:10510586-10510761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
352-528
               

               
Cow position:
               
chr17:3471489-3471316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
145, 57
               

               
Conread position:
               
353-528
               

               
Cow position:
               
chr17:33290741-33290917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
55, 84
               

               
Conread position:
               
357-527
               

               
Cow position:
               
chr17:1526286-1526457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
55, 109
               

               
Conread position:
               
357-528
               

               
Cow position:
               
chr17:21207076-21207235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
358-528
               

               
Cow position:
               
chr17:24761164-24761331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
358-528
               

               
Cow position:
               
chr17:34207751-34207922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
360-528
               

               
Cow position:
               
chr17:27306222-27306053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
143, 53
               

               
Conread position:
               
363-526
               

               
Cow position:
               
chr17:2839968-2839806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
367-528
               

               
Cow position:
               
chr17:25122353-25122512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
104, 38
               

               
Conread position:
               
368-523
               

               
Cow position:
               
chr17:42347170-42347323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
368-527
               

               
Cow position:
               
chr17:242692-242533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
125, 37
               

               
Conread position:
               
368-528
               

               
Cow position:
               
chr17:1295517-1295675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
125, 40
               

               
Conread position:
               
368-528
               

               
Cow position:
               
chr17:11921220-11921386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
372-510
               

               
Cow position:
               
chr17:20857794-20857933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
39, 55
               

               
Conread position:
               
372-522
               

               
Cow position:
               
chr17:32950325-32950175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
128, 21
               

               
Conread position:
               
372-528
               

               
Cow position:
               
chr17:21312759-21312914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
385-528
               

               
Cow position:
               
chr17:4436194-4436335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
405-528
               

               
Cow position:
               
chr17:12216052-12216177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
419-528
               

               
Cow position:
               
chr17:21017802-21017694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
69, 0
               
Show alignments to all cow chromosomes.