Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-rpigcf0_020868.5
        

               Conread position:
               185-416
               

               Cow position:
               chr18:38806754-38806518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               102, 5
               

               Conread position:
               185-461
               

               Cow position:
               chr18:56205080-56204800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               28, 139
               

               Conread position:
               192-525
               

               Cow position:
               chr18:52703676-52704027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               239
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               83, 252
               

               Conread position:
               193-510
               

               Cow position:
               chr18:11578238-11577929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               238
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               85, 21
               

               Conread position:
               194-527
               

               Cow position:
               chr18:22411450-22411792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               83, 15
               

               Conread position:
               194-528
               

               Cow position:
               chr18:5711498-5711845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               242
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               64, 17
               

               Conread position:
               196-504
               

               Cow position:
               chr18:50095233-50095547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               84, 15
               

               Conread position:
               196-528
               

               Cow position:
               chr18:30794582-30794257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               241
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               14, 34
               

               Conread position:
               197-523
               

               Cow position:
               chr18:16841893-16842238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               74, 20
               

               Conread position:
               198-528
               

               Cow position:
               chr18:47812614-47812292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               219
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               299, 11
               

               Conread position:
               199-508
               

               Cow position:
               chr18:20462528-20462851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 238
               

               Conread position:
               199-522
               

               Cow position:
               chr18:33300062-33299731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 39
               

               Conread position:
               199-527
               

               Cow position:
               chr18:50993129-50993442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               227, 80
               

               Conread position:
               200-521
               

               Cow position:
               chr18:20126468-20126135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 149
               

               Conread position:
               200-524
               

               Cow position:
               chr18:19849594-19849929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 173
               

               Conread position:
               200-525
               

               Cow position:
               chr18:50637316-50637633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               245
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               71, 123
               

               Conread position:
               200-527
               

               Cow position:
               chr18:55589346-55589655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               224
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               84, 35
               

               Conread position:
               200-528
               

               Cow position:
               chr18:50082105-50082427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 80
               

               Conread position:
               201-338
               

               Cow position:
               chr18:38017853-38017713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               40, 44
               

               Conread position:
               201-527
               

               Cow position:
               chr18:20126951-20127279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               95, 40
               

               Conread position:
               201-528
               

               Cow position:
               chr18:14048840-14048537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               14, 79
               

               Conread position:
               202-509
               

               Cow position:
               chr18:40202656-40202963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               113, 10
               

               Conread position:
               202-527
               

               Cow position:
               chr18:4666081-4666387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               224
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               214, 11
               

               Conread position:
               203-456
               

               Cow position:
               chr18:25281738-25281997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               12, 43
               

               Conread position:
               203-528
               

               Cow position:
               chr18:13360201-13359887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               68, 12
               

               Conread position:
               203-528
               

               Cow position:
               chr18:47525565-47525222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               71, 36
               

               Conread position:
               204-528
               

               Cow position:
               chr18:52877520-52877202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               74, 184
               

               Conread position:
               205-527
               

               Cow position:
               chr18:50700837-50700494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               230
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               87, 122
               

               Conread position:
               206-408
               

               Cow position:
               chr18:49981288-49981499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               169
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               206-497
               

               Cow position:
               chr18:54130172-54130480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 49
               

               Conread position:
               206-501
               

               Cow position:
               chr18:51594645-51594952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               227
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               19, 216
               

               Conread position:
               206-523
               

               Cow position:
               chr18:4601875-4602182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 31
               

               Conread position:
               206-528
               

               Cow position:
               chr18:18339792-18340145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               246
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               48, 91
               

               Conread position:
               209-528
               

               Cow position:
               chr18:49100218-49100547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 221
               

               Conread position:
               210-441
               

               Cow position:
               chr18:42953912-42954157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               42, 32
               

               Conread position:
               210-442
               

               Cow position:
               chr18:20317897-20318135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               65, 136
               

               Conread position:
               210-458
               

               Cow position:
               chr18:1732733-1732969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               68, 23
               

               Conread position:
               210-466
               

               Cow position:
               chr18:2146426-2146701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 260
               

               Conread position:
               210-483
               

               Cow position:
               chr18:31711411-31711698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 269
               

               Conread position:
               210-527
               

               Cow position:
               chr18:35797758-35797448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               52, 37
               

               Conread position:
               210-528
               

               Cow position:
               chr18:19646323-19646000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               219
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               53, 223
               

               Conread position:
               211-510
               

               Cow position:
               chr18:3371036-3370739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               213-523
               

               Cow position:
               chr18:47183150-47183455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 23
               

               Conread position:
               214-525
               

               Cow position:
               chr18:45961129-45961439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               81, 48
               

               Conread position:
               215-528
               

               Cow position:
               chr18:248672-248985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               214
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               96, 172
               

               Conread position:
               215-528
               

               Cow position:
               chr18:3166349-3166668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               65, 153
               

               Conread position:
               216-528
               

               Cow position:
               chr18:5578455-5578129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 150
               

               Conread position:
               216-528
               

               Cow position:
               chr18:29796288-29796602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               230
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               59, 28
               

               Conread position:
               220-521
               

               Cow position:
               chr18:2042356-2042665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               215
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               17, 50
               

               Conread position:
               222-486
               

               Cow position:
               chr18:25006352-25006624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               208
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               56, 208
               

               Conread position:
               222-527
               

               Cow position:
               chr18:16726784-16726471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               73, 108
               

               Conread position:
               226-528
               

               Cow position:
               chr18:11685107-11684811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 18
               

               Conread position:
               227-528
               

               Cow position:
               chr18:4648629-4648921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               270, 65
               

               Conread position:
               230-527
               

               Cow position:
               chr18:24855716-24856021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               84, 168
               

               Conread position:
               250-527
               

               Cow position:
               chr18:23425026-23424749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               185
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               61, 230
               

               Conread position:
               259-528
               

               Cow position:
               chr18:44801800-44802065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               264-522
               

               Cow position:
               chr18:45571095-45570843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               266-448
               

               Cow position:
               chr18:29760109-29759929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               269-528
               

               Cow position:
               chr18:29958080-29958335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 144
               

               Conread position:
               270-472
               

               Cow position:
               chr18:52402900-52403093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               148, 36
               

               Conread position:
               270-527
               

               Cow position:
               chr18:21176265-21176010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               137, 87
               

               Conread position:
               274-455
               

               Cow position:
               chr18:49324362-49324528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               274-528
               

               Cow position:
               chr18:6609782-6610037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 27
               

               Conread position:
               274-528
               

               Cow position:
               chr18:13507666-13507916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               274-528
               

               Cow position:
               chr18:35012243-35012484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               275-369
               

               Cow position:
               chr18:8163742-8163836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               95
               

               Alignm identity:
               82
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               275-398
               

               Cow position:
               chr18:41511430-41511555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               88, 64
               

               Conread position:
               275-465
               

               Cow position:
               chr18:20798401-20798205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               275-469
               

               Cow position:
               chr18:52406765-52406583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               275-491
               

               Cow position:
               chr18:42751530-42751752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 45
               

               Conread position:
               275-524
               

               Cow position:
               chr18:34527022-34527272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 48
               

               Conread position:
               275-526
               

               Cow position:
               chr18:3193780-3193529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               175
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               15, 128
               

               Conread position:
               275-526
               

               Cow position:
               chr18:25282481-25282728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               275-528
               

               Cow position:
               chr18:16686262-16686514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               275-528
               

               Cow position:
               chr18:23766336-23766590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               275-528
               

               Cow position:
               chr18:54111281-54111042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               275-528
               

               Cow position:
               chr18:55000669-55000913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               276-462
               

               Cow position:
               chr18:43796884-43797065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               151
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               276-510
               

               Cow position:
               chr18:19641043-19640820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               226, 20
               

               Conread position:
               276-517
               

               Cow position:
               chr18:39022330-39022095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               23, 132
               

               Conread position:
               276-528
               

               Cow position:
               chr18:17005332-17005077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               157, 132
               

               Conread position:
               276-528
               

               Cow position:
               chr18:28923775-28924011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               276-528
               

               Cow position:
               chr18:39662849-39662601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               16, 23
               

               Conread position:
               276-528
               

               Cow position:
               chr18:52478222-52477973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               217, 37
               

               Conread position:
               276-528
               

               Cow position:
               chr18:54572219-54572470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               71, 20
               

               Conread position:
               277-376
               

               Cow position:
               chr18:49602972-49603071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               85
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               277-383
               

               Cow position:
               chr18:41724747-41724853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               277-385
               

               Cow position:
               chr18:48407810-48407702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               277-387
               

               Cow position:
               chr18:47410614-47410504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               277-388
               

               Cow position:
               chr18:2793900-2794011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               90
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               277-389
               

               Cow position:
               chr18:11672113-11672002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               277-392
               

               Cow position:
               chr18:45985554-45985669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               90
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               277-394
               

               Cow position:
               chr18:6470166-6470049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               38, 44
               

               Conread position:
               277-394
               

               Cow position:
               chr18:45558219-45558101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               277-397
               

               Cow position:
               chr18:42427691-42427571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               93
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               277-400
               

               Cow position:
               chr18:44917828-44917705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               277-401
               

               Cow position:
               chr18:2765320-2765200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               98
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               277-403
               

               Cow position:
               chr18:16378994-16378868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               277-406
               

               Cow position:
               chr18:2773321-2773450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               277-406
               

               Cow position:
               chr18:2776824-2776953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               277-407
               

               Cow position:
               chr18:40047430-40047557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               277-411
               

               Cow position:
               chr18:15809732-15809863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               277-411
               

               Cow position:
               chr18:46072534-46072400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               277-411
               

               Cow position:
               chr18:47547916-47548049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               277-414
               

               Cow position:
               chr18:5647884-5647745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               277-414
               

               Cow position:
               chr18:27388654-27388518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               70, 26
               

               Conread position:
               277-415
               

               Cow position:
               chr18:38937892-38937755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               277-415
               

               Cow position:
               chr18:51383326-51383462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               277-416
               

               Cow position:
               chr18:18844087-18843945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               82, 60
               

               Conread position:
               277-417
               

               Cow position:
               chr18:31082277-31082416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               277-420
               

               Cow position:
               chr18:37189223-37189366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               277-421
               

               Cow position:
               chr18:14225465-14225318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               277-421
               

               Cow position:
               chr18:23505402-23505258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               277-421
               

               Cow position:
               chr18:50359403-50359258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               277-424
               

               Cow position:
               chr18:35889029-35889170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               110
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               277-425
               

               Cow position:
               chr18:24719384-24719234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               277-426
               

               Cow position:
               chr18:24342914-24342769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               277-434
               

               Cow position:
               chr18:52414038-52413879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               277-453
               

               Cow position:
               chr18:17660489-17660660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               277-453
               

               Cow position:
               chr18:53038904-53038724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               277-454
               

               Cow position:
               chr18:25598161-25598345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               277-456
               

               Cow position:
               chr18:35367124-35367292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               21, 77
               

               Conread position:
               277-460
               

               Cow position:
               chr18:53642679-53642862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               83, 43
               

               Conread position:
               277-462
               

               Cow position:
               chr18:11312865-11313050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               32, 42
               

               Conread position:
               277-462
               

               Cow position:
               chr18:41025057-41025259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               13, 160
               

               Conread position:
               277-463
               

               Cow position:
               chr18:24759585-24759768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               277-464
               

               Cow position:
               chr18:4534952-4535129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               69, 123
               

               Conread position:
               277-464
               

               Cow position:
               chr18:41950273-41950103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               277-464
               

               Cow position:
               chr18:51178657-51178830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               277-465
               

               Cow position:
               chr18:2619142-2619325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               277-467
               

               Cow position:
               chr18:7077025-7076840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               277-468
               

               Cow position:
               chr18:12584768-12584961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               277-468
               

               Cow position:
               chr18:19883604-19883412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               277-471
               

               Cow position:
               chr18:11891799-11891614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               17, 36
               

               Conread position:
               277-471
               

               Cow position:
               chr18:23162957-23162772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               131, 61
               

               Conread position:
               277-472
               

               Cow position:
               chr18:4489837-4490017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               277-472
               

               Cow position:
               chr18:4872134-4871952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               184, 34
               

               Conread position:
               277-472
               

               Cow position:
               chr18:23630536-23630721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               148, 63
               

               Conread position:
               277-474
               

               Cow position:
               chr18:35535075-35535274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               136, 128
               

               Conread position:
               277-474
               

               Cow position:
               chr18:49017564-49017379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               277-475
               

               Cow position:
               chr18:22790017-22790214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               168, 102
               

               Conread position:
               277-478
               

               Cow position:
               chr18:49038533-49038334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               165
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               190, 0
               

               Conread position:
               277-480
               

               Cow position:
               chr18:22568995-22569194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               277-480
               

               Cow position:
               chr18:34219844-34220052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               41, 133
               

               Conread position:
               277-480
               

               Cow position:
               chr18:47966856-47967053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               277-486
               

               Cow position:
               chr18:33159013-33158819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               277-489
               

               Cow position:
               chr18:4203859-4204059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               277-490
               

               Cow position:
               chr18:51655971-51656183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               277-491
               

               Cow position:
               chr18:10214119-10214336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               277-491
               

               Cow position:
               chr18:48242263-48242049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               32, 94
               

               Conread position:
               277-491
               

               Cow position:
               chr18:49841348-49841138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               168
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               141, 29
               

               Conread position:
               277-499
               

               Cow position:
               chr18:26998955-26998733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               80, 19
               

               Conread position:
               277-500
               

               Cow position:
               chr18:24508160-24508389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               277-501
               

               Cow position:
               chr18:7963499-7963294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               277-501
               

               Cow position:
               chr18:16997325-16997102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               149, 128
               

               Conread position:
               277-501
               

               Cow position:
               chr18:24266336-24266560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               47, 41
               

               Conread position:
               277-502
               

               Cow position:
               chr18:1571166-1571388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               277-502
               

               Cow position:
               chr18:46135812-46135591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               169
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               277-503
               

               Cow position:
               chr18:29474814-29474588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               127, 38
               

               Conread position:
               277-505
               

               Cow position:
               chr18:3417229-3417019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               277-506
               

               Cow position:
               chr18:55499142-55498918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               121, 43
               

               Conread position:
               277-507
               

               Cow position:
               chr18:52855126-52854893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               277-510
               

               Cow position:
               chr18:3132699-3132913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               277-510
               

               Cow position:
               chr18:4556098-4556328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               220, 61
               

               Conread position:
               277-510
               

               Cow position:
               chr18:11377435-11377209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               220, 53
               

               Conread position:
               277-510
               

               Cow position:
               chr18:11779724-11779500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               277-510
               

               Cow position:
               chr18:12113294-12113536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               122, 55
               

               Conread position:
               277-510
               

               Cow position:
               chr18:35874149-35873915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               7, 20
               

               Conread position:
               277-515
               

               Cow position:
               chr18:5632339-5632101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               154, 127
               

               Conread position:
               277-519
               

               Cow position:
               chr18:2774068-2774299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               277-520
               

               Cow position:
               chr18:9089770-9089531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               277-520
               

               Cow position:
               chr18:11790992-11790764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               139, 66
               

               Conread position:
               277-520
               

               Cow position:
               chr18:51850493-51850729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               220, 62
               

               Conread position:
               277-521
               

               Cow position:
               chr18:7952274-7952031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               133, 87
               

               Conread position:
               277-521
               

               Cow position:
               chr18:8171014-8171255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               277-521
               

               Cow position:
               chr18:12270572-12270340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               277-521
               

               Cow position:
               chr18:28657840-28658079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               277-522
               

               Cow position:
               chr18:10891585-10891343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               186
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               134, 61
               

               Conread position:
               277-522
               

               Cow position:
               chr18:11867411-11867169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               46, 151
               

               Conread position:
               277-522
               

               Cow position:
               chr18:12273729-12273481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               224, 141
               

               Conread position:
               277-522
               

               Cow position:
               chr18:33157886-33157647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               83, 8
               

               Conread position:
               277-523
               

               Cow position:
               chr18:20641425-20641663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               190
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               192, 128
               

               Conread position:
               277-523
               

               Cow position:
               chr18:33896347-33896600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 210
               

               Conread position:
               277-523
               

               Cow position:
               chr18:50974222-50974468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               29, 147
               

               Conread position:
               277-523
               

               Cow position:
               chr18:51405840-51406083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               180
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               173, 37
               

               Conread position:
               277-524
               

               Cow position:
               chr18:10322877-10322631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               220, 126
               

               Conread position:
               277-524
               

               Cow position:
               chr18:15613789-15614033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 128
               

               Conread position:
               277-524
               

               Cow position:
               chr18:19193294-19193539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               277-524
               

               Cow position:
               chr18:38607292-38607050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 50
               

               Conread position:
               277-524
               

               Cow position:
               chr18:42431540-42431780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               277-524
               

               Cow position:
               chr18:46452807-46453048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               71, 132
               

               Conread position:
               277-524
               

               Cow position:
               chr18:55787992-55787755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               277-524
               

               Cow position:
               chr18:56184006-56183768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 126
               

               Conread position:
               277-525
               

               Cow position:
               chr18:47828889-47828653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               277-526
               

               Cow position:
               chr18:1585042-1585292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               120, 108
               

               Conread position:
               277-526
               

               Cow position:
               chr18:4539811-4540054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               186
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               277-526
               

               Cow position:
               chr18:5072339-5072588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               134, 198
               

               Conread position:
               277-526
               

               Cow position:
               chr18:9010779-9010547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               277-526
               

               Cow position:
               chr18:9365992-9365741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               277-526
               

               Cow position:
               chr18:18918889-18919134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               226, 43
               

               Conread position:
               277-526
               

               Cow position:
               chr18:31672442-31672689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               220, 54
               

               Conread position:
               277-526
               

               Cow position:
               chr18:32883372-32883131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               277-526
               

               Cow position:
               chr18:39623871-39623623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               216, 132
               

               Conread position:
               277-526
               

               Cow position:
               chr18:45903826-45904069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               277-526
               

               Cow position:
               chr18:47835895-47835651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               220, 55
               

               Conread position:
               277-526
               

               Cow position:
               chr18:51392572-51392817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               211, 76
               

               Conread position:
               277-526
               

               Cow position:
               chr18:56171943-56172192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               139, 71
               

               Conread position:
               277-526
               

               Cow position:
               chr18:56190891-56191147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               38, 44
               

               Conread position:
               277-527
               

               Cow position:
               chr18:2592097-2592345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               174
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               118, 70
               

               Conread position:
               277-527
               

               Cow position:
               chr18:7359816-7359563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               196, 137
               

               Conread position:
               277-527
               

               Cow position:
               chr18:12117781-12118016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               183
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               55, 21
               

               Conread position:
               277-527
               

               Cow position:
               chr18:27109221-27109473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               220, 0
               

               Conread position:
               277-527
               

               Cow position:
               chr18:29065314-29065550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               277-527
               

               Cow position:
               chr18:42747659-42747417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               220, 76
               

               Conread position:
               277-527
               

               Cow position:
               chr18:46048823-46048585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               216, 115
               

               Conread position:
               277-527
               

               Cow position:
               chr18:55505475-55505230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 50
               

               Conread position:
               277-528
               

               Cow position:
               chr18:247624-247860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               245, 61
               

               Conread position:
               277-528
               

               Cow position:
               chr18:1399284-1399529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               277-528
               

               Cow position:
               chr18:1954518-1954767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 133
               

               Conread position:
               277-528
               

               Cow position:
               chr18:3158524-3158780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               57, 121
               

               Conread position:
               277-528
               

               Cow position:
               chr18:3180482-3180243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               277-528
               

               Cow position:
               chr18:3209793-3209536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               195
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               128, 19
               

               Conread position:
               277-528
               

               Cow position:
               chr18:3211949-3211694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               277-528
               

               Cow position:
               chr18:4495815-4496065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               220, 151
               

               Conread position:
               277-528
               

               Cow position:
               chr18:4884449-4884688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               149, 16
               

               Conread position:
               277-528
               

               Cow position:
               chr18:5766484-5766235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               190
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               15, 64
               

               Conread position:
               277-528
               

               Cow position:
               chr18:7650056-7649820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               277-528
               

               Cow position:
               chr18:7956219-7955968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               95, 218
               

               Conread position:
               277-528
               

               Cow position:
               chr18:8300088-8299836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 44
               

               Conread position:
               277-528
               

               Cow position:
               chr18:9974258-9974501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               277-528
               

               Cow position:
               chr18:10656510-10656268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               79, 161
               

               Conread position:
               277-528
               

               Cow position:
               chr18:11184011-11183768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 64
               

               Conread position:
               277-528
               

               Cow position:
               chr18:12023567-12023812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               187
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               277-528
               

               Cow position:
               chr18:12242345-12242099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 70
               

               Conread position:
               277-528
               

               Cow position:
               chr18:14586399-14586649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               223, 114
               

               Conread position:
               277-528
               

               Cow position:
               chr18:15517102-15517342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               138, 38
               

               Conread position:
               277-528
               

               Cow position:
               chr18:17390923-17391154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               277-528
               

               Cow position:
               chr18:18369291-18369540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 9
               

               Conread position:
               277-528
               

               Cow position:
               chr18:18592544-18592299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               277-528
               

               Cow position:
               chr18:19273025-19273275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               133, 191
               

               Conread position:
               277-528
               

               Cow position:
               chr18:19896380-19896633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               184
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               69, 60
               

               Conread position:
               277-528
               

               Cow position:
               chr18:21102705-21102951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               220, 77
               

               Conread position:
               277-528
               

               Cow position:
               chr18:21192343-21192594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               143, 27
               

               Conread position:
               277-528
               

               Cow position:
               chr18:21195264-21195515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               66, 191
               

               Conread position:
               277-528
               

               Cow position:
               chr18:21740744-21740987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               277-528
               

               Cow position:
               chr18:22055800-22056045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               198
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               15, 135
               

               Conread position:
               277-528
               

               Cow position:
               chr18:22120814-22121058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               186
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               277-528
               

               Cow position:
               chr18:22214559-22214304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               188
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               132, 191
               

               Conread position:
               277-528
               

               Cow position:
               chr18:25647177-25647429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 51
               

               Conread position:
               277-528
               

               Cow position:
               chr18:26939054-26938808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               41, 46
               

               Conread position:
               277-528
               

               Cow position:
               chr18:28930565-28930807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               199
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               139, 153
               

               Conread position:
               277-528
               

               Cow position:
               chr18:29648854-29648608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               186
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               139, 20
               

               Conread position:
               277-528
               

               Cow position:
               chr18:30360078-30360312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               195
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               277-528
               

               Cow position:
               chr18:33008137-33007883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 52
               

               Conread position:
               277-528
               

               Cow position:
               chr18:36201558-36201803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 92
               

               Conread position:
               277-528
               

               Cow position:
               chr18:36459002-36458754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               189
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               56, 78
               

               Conread position:
               277-528
               

               Cow position:
               chr18:36746188-36746432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               192, 128
               

               Conread position:
               277-528
               

               Cow position:
               chr18:37002703-37002456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               277-528
               

               Cow position:
               chr18:37023479-37023730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               183
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               277-528
               

               Cow position:
               chr18:38985770-38985514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 153
               

               Conread position:
               277-528
               

               Cow position:
               chr18:39434895-39434650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               277-528
               

               Cow position:
               chr18:39875189-39875436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               277-528
               

               Cow position:
               chr18:42432018-42432271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 91
               

               Conread position:
               277-528
               

               Cow position:
               chr18:43020333-43020568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               277-528
               

               Cow position:
               chr18:43283686-43283935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               154, 21
               

               Conread position:
               277-528
               

               Cow position:
               chr18:44262701-44262449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 61
               

               Conread position:
               277-528
               

               Cow position:
               chr18:45104367-45104618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               189
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               37, 224
               

               Conread position:
               277-528
               

               Cow position:
               chr18:45637345-45637574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               277-528
               

               Cow position:
               chr18:46727659-46727423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               277-528
               

               Cow position:
               chr18:48713622-48713372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               277-528
               

               Cow position:
               chr18:48828704-48828959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               35, 64
               

               Conread position:
               277-528
               

               Cow position:
               chr18:51691391-51691641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               221, 132
               

               Conread position:
               277-528
               

               Cow position:
               chr18:51757164-51756915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               186, 38
               

               Conread position:
               277-528
               

               Cow position:
               chr18:55397370-55397125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               181
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               128, 30
               

               Conread position:
               277-528
               

               Cow position:
               chr18:55747756-55747506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               220, 43
               

               Conread position:
               277-528
               

               Cow position:
               chr18:56159532-56159283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               220, 38
               

               Conread position:
               277-528
               

               Cow position:
               chr18:56181385-56181636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               85, 33
               

               Conread position:
               278-390
               

               Cow position:
               chr18:9846340-9846452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               89
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               278-408
               

               Cow position:
               chr18:21081822-21081951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               278-471
               

               Cow position:
               chr18:50959556-50959365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               84, 18
               

               Conread position:
               278-510
               

               Cow position:
               chr18:55140489-55140718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               39, 43
               

               Conread position:
               278-521
               

               Cow position:
               chr18:30586155-30586390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               182
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               278-521
               

               Cow position:
               chr18:52684535-52684778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               135, 78
               

               Conread position:
               278-522
               

               Cow position:
               chr18:4797035-4796800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               219, 35
               

               Conread position:
               278-522
               

               Cow position:
               chr18:9558043-9557811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               237, 26
               

               Conread position:
               278-522
               

               Cow position:
               chr18:55692886-55692646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               9, 27
               

               Conread position:
               278-525
               

               Cow position:
               chr18:55806563-55806808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               215, 132
               

               Conread position:
               278-526
               

               Cow position:
               chr18:7414958-7415204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               41, 98
               

               Conread position:
               278-526
               

               Cow position:
               chr18:55788926-55789165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               131, 73
               

               Conread position:
               278-528
               

               Cow position:
               chr18:9066772-9066521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               76, 162
               

               Conread position:
               278-528
               

               Cow position:
               chr18:10977141-10977384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 72
               

               Conread position:
               278-528
               

               Cow position:
               chr18:11691339-11691585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               278-528
               

               Cow position:
               chr18:15173083-15172855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               62, 115
               

               Conread position:
               278-528
               

               Cow position:
               chr18:42479516-42479765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               278-528
               

               Cow position:
               chr18:43555454-43555702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               181
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               278-528
               

               Cow position:
               chr18:51190529-51190768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               188
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               278-528
               

               Cow position:
               chr18:55461639-55461885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               279-473
               

               Cow position:
               chr18:9040639-9040832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               129, 121
               

               Conread position:
               279-526
               

               Cow position:
               chr18:55119944-55119706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 199
               

               Conread position:
               279-528
               

               Cow position:
               chr18:2863921-2864176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               279-528
               

               Cow position:
               chr18:6881286-6881525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 68
               

               Conread position:
               279-528
               

               Cow position:
               chr18:10954535-10954301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               279-528
               

               Cow position:
               chr18:28101701-28101454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               280-408
               

               Cow position:
               chr18:50632374-50632502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               280-417
               

               Cow position:
               chr18:38601816-38601954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               102
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               280-424
               

               Cow position:
               chr18:47705303-47705159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               280-440
               

               Cow position:
               chr18:9176967-9176811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               280-453
               

               Cow position:
               chr18:32189439-32189613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               136, 170
               

               Conread position:
               280-472
               

               Cow position:
               chr18:34834560-34834369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               131, 60
               

               Conread position:
               280-502
               

               Cow position:
               chr18:51643299-51643517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               280-518
               

               Cow position:
               chr18:43950896-43950656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               38, 60
               

               Conread position:
               280-520
               

               Cow position:
               chr18:48633844-48633623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               188
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               280-524
               

               Cow position:
               chr18:7951182-7950944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               146, 10
               

               Conread position:
               280-528
               

               Cow position:
               chr18:7952705-7952471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               217, 19
               

               Conread position:
               280-528
               

               Cow position:
               chr18:25984508-25984747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               176
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               131, 23
               

               Conread position:
               280-528
               

               Cow position:
               chr18:47512074-47511821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 143
               

               Conread position:
               280-528
               

               Cow position:
               chr18:48452139-48451875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               202
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               86, 105
               

               Conread position:
               280-528
               

               Cow position:
               chr18:56166049-56165811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               181
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               183, 77
               

               Conread position:
               281-412
               

               Cow position:
               chr18:52649280-52649411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               110
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               281-527
               

               Cow position:
               chr18:19620009-19619776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               186
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               281-528
               

               Cow position:
               chr18:4182121-4182365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               138, 23
               

               Conread position:
               281-528
               

               Cow position:
               chr18:7109196-7108949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               216, 15
               

               Conread position:
               281-528
               

               Cow position:
               chr18:15880772-15881034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               199
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               17, 255
               

               Conread position:
               281-528
               

               Cow position:
               chr18:29058434-29058671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               189
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               16, 57
               

               Conread position:
               281-528
               

               Cow position:
               chr18:36230659-36230897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               281-528
               

               Cow position:
               chr18:38687147-38686917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               193
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               281-528
               

               Cow position:
               chr18:47517137-47517390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               86, 136
               

               Conread position:
               282-462
               

               Cow position:
               chr18:4757967-4758151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               138, 63
               

               Conread position:
               282-526
               

               Cow position:
               chr18:29356558-29356802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               282-527
               

               Cow position:
               chr18:4381359-4381115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               178
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               282-527
               

               Cow position:
               chr18:6310148-6309907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               187
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               32, 66
               

               Conread position:
               282-528
               

               Cow position:
               chr18:10904916-10904672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               178
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               185, 0
               

               Conread position:
               282-528
               

               Cow position:
               chr18:23476621-23476853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               282-528
               

               Cow position:
               chr18:51212249-51212009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 47
               

               Conread position:
               283-421
               

               Cow position:
               chr18:22516471-22516607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               283-527
               

               Cow position:
               chr18:32773943-32773703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               124, 21
               

               Conread position:
               283-528
               

               Cow position:
               chr18:38344871-38344628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               132, 73
               

               Conread position:
               284-528
               

               Cow position:
               chr18:10576175-10575931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 190
               

               Conread position:
               286-472
               

               Cow position:
               chr18:44483711-44483893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               287-527
               

               Cow position:
               chr18:20174068-20174309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               209, 113
               

               Conread position:
               288-528
               

               Cow position:
               chr18:50382308-50382081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               294-446
               

               Cow position:
               chr18:49015179-49015030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               120, 53
               

               Conread position:
               294-472
               

               Cow position:
               chr18:40759261-40759085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               294-518
               

               Cow position:
               chr18:31125174-31125388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               297-526
               

               Cow position:
               chr18:11618519-11618303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               50, 89
               

               Conread position:
               300-528
               

               Cow position:
               chr18:14815300-14815515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               302-528
               

               Cow position:
               chr18:25206142-25206367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               168
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               303-506
               

               Cow position:
               chr18:19688069-19687864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               303-528
               

               Cow position:
               chr18:15025717-15025496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               106, 36
               

               Conread position:
               304-499
               

               Cow position:
               chr18:30405616-30405811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               94, 124
               

               Conread position:
               304-502
               

               Cow position:
               chr18:858868-858668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               305-515
               

               Cow position:
               chr18:22274798-22274998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               305-524
               

               Cow position:
               chr18:20270971-20271193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               45, 28
               

               Conread position:
               306-506
               

               Cow position:
               chr18:51643976-51644177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               123, 194
               

               Conread position:
               306-507
               

               Cow position:
               chr18:30225488-30225701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               306-526
               

               Cow position:
               chr18:4331003-4330779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               101, 137
               

               Conread position:
               306-528
               

               Cow position:
               chr18:5487284-5487073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               306-528
               

               Cow position:
               chr18:17649696-17649918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               101, 108
               

               Conread position:
               306-528
               

               Cow position:
               chr18:35537194-35537412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               115, 21
               

               Conread position:
               307-526
               

               Cow position:
               chr18:4629083-4628857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               127, 148
               

               Conread position:
               307-528
               

               Cow position:
               chr18:3027319-3027539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               308-489
               

               Cow position:
               chr18:23623593-23623771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               309-527
               

               Cow position:
               chr18:39001768-39001979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               188, 30
               

               Conread position:
               310-528
               

               Cow position:
               chr18:30248101-30248305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               64, 30
               

               Conread position:
               319-523
               

               Cow position:
               chr18:12809884-12809686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               319-528
               

               Cow position:
               chr18:36296984-36297210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               320-528
               

               Cow position:
               chr18:306039-306237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               88, 37
               

               Conread position:
               320-528
               

               Cow position:
               chr18:55552995-55552792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               178, 85
               

               Conread position:
               321-515
               

               Cow position:
               chr18:4952183-4952373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               88, 33
               

               Conread position:
               322-501
               

               Cow position:
               chr18:43065556-43065378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               322-517
               

               Cow position:
               chr18:896056-895863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               82, 43
               

               Conread position:
               323-528
               

               Cow position:
               chr18:8104914-8105123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               165
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               324-471
               

               Cow position:
               chr18:45079449-45079595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               325-514
               

               Cow position:
               chr18:11832143-11831965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               325-528
               

               Cow position:
               chr18:33407640-33407437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               160
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               196, 99
               

               Conread position:
               332-528
               

               Cow position:
               chr18:19887563-19887752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               17, 120
               

               Conread position:
               333-514
               

               Cow position:
               chr18:29991495-29991682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               152
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               341-472
               

               Cow position:
               chr18:41257895-41258025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               341-528
               

               Cow position:
               chr18:48453695-48453517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               341-528
               

               Cow position:
               chr18:56361596-56361778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               342-526
               

               Cow position:
               chr18:7487256-7487083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               344-528
               

               Cow position:
               chr18:219343-219155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               344-528
               

               Cow position:
               chr18:6103093-6103274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               76, 107
               

               Conread position:
               344-528
               

               Cow position:
               chr18:11680728-11680547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               344-528
               

               Cow position:
               chr18:44548908-44549092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               149
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               348-528
               

               Cow position:
               chr18:267815-267993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               155, 77
               

               Conread position:
               356-523
               

               Cow position:
               chr18:56150651-56150822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               358-528
               

               Cow position:
               chr18:10861439-10861615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               138, 55
               

               Conread position:
               358-528
               

               Cow position:
               chr18:21205354-21205185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               73, 46
               

               Conread position:
               358-528
               

               Cow position:
               chr18:33606621-33606451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               139, 46
               

               Conread position:
               360-528
               

               Cow position:
               chr18:15340456-15340624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               84, 65
               

               Conread position:
               361-526
               

               Cow position:
               chr18:3018088-3018251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               361-528
               

               Cow position:
               chr18:24945818-24945986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               136, 95
               

               Conread position:
               364-527
               

               Cow position:
               chr18:14085448-14085285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               60, 45
               

               Conread position:
               368-521
               

               Cow position:
               chr18:35582117-35582271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               368-526
               

               Cow position:
               chr18:52658392-52658239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               373-528
               

               Cow position:
               chr18:16847670-16847514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               374-528
               

               Cow position:
               chr18:29388196-29388042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               381-528
               

               Cow position:
               chr18:8164066-8164213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               87, 128
               

               Conread position:
               419-523
               

               Cow position:
               chr18:13293443-13293338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               89
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               426-528
               

               Cow position:
               chr18:15809985-15810087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.
Conread position:	185-416
Cow position:	chr18:38806754-38806518 (view UCSC Genome Browser custom track)
Alignm length:	243
Alignm identity:	178
Alignm E-value:	9e-33
Alignm gaps (pig, cow):	102, 5
Conread position:	185-461
Cow position:	chr18:56205080-56204800 (view UCSC Genome Browser custom track)
Alignm length:	284
Alignm identity:	182
Alignm E-value:	3e-21
Alignm gaps (pig, cow):	28, 139
Conread position:	192-525
Cow position:	chr18:52703676-52704027 (view UCSC Genome Browser custom track)
Alignm length:	358
Alignm identity:	239
Alignm E-value:	5e-27
Alignm gaps (pig, cow):	83, 252
Conread position:	193-510
Cow position:	chr18:11578238-11577929 (view UCSC Genome Browser custom track)
Alignm length:	329
Alignm identity:	238
Alignm E-value:	1.99993e-41
Alignm gaps (pig, cow):	85, 21
Conread position:	194-527
Cow position:	chr18:22411450-22411792 (view UCSC Genome Browser custom track)
Alignm length:	347
Alignm identity:	236
Alignm E-value:	2e-37
Alignm gaps (pig, cow):	83, 15
Conread position:	194-528
Cow position:	chr18:5711498-5711845 (view UCSC Genome Browser custom track)
Alignm length:	358
Alignm identity:	242
Alignm E-value:	6e-28
Alignm gaps (pig, cow):	64, 17
Conread position:	196-504
Cow position:	chr18:50095233-50095547 (view UCSC Genome Browser custom track)
Alignm length:	327
Alignm identity:	236
Alignm E-value:	2e-37
Alignm gaps (pig, cow):	84, 15
Conread position:	196-528
Cow position:	chr18:30794582-30794257 (view UCSC Genome Browser custom track)
Alignm length:	340
Alignm identity:	241
Alignm E-value:	9.80909e-45
Alignm gaps (pig, cow):	14, 34
Conread position:	197-523
Cow position:	chr18:16841893-16842238 (view UCSC Genome Browser custom track)
Alignm length:	348
Alignm identity:	224
Alignm E-value:	1e-22
Alignm gaps (pig, cow):	74, 20
Conread position:	198-528
Cow position:	chr18:47812614-47812292 (view UCSC Genome Browser custom track)
Alignm length:	333
Alignm identity:	219
Alignm E-value:	8e-31
Alignm gaps (pig, cow):	299, 11
Conread position:	199-508
Cow position:	chr18:20462528-20462851 (view UCSC Genome Browser custom track)
Alignm length:	328
Alignm identity:	240
Alignm E-value:	0
Alignm gaps (pig, cow):	18, 238
Conread position:	199-522
Cow position:	chr18:33300062-33299731 (view UCSC Genome Browser custom track)
Alignm length:	338
Alignm identity:	256
Alignm E-value:	0
Alignm gaps (pig, cow):	75, 39
Conread position:	199-527
Cow position:	chr18:50993129-50993442 (view UCSC Genome Browser custom track)
Alignm length:	331
Alignm identity:	214
Alignm E-value:	3e-22
Alignm gaps (pig, cow):	227, 80
Conread position:	200-521
Cow position:	chr18:20126468-20126135 (view UCSC Genome Browser custom track)
Alignm length:	338
Alignm identity:	241
Alignm E-value:	0
Alignm gaps (pig, cow):	72, 149
Conread position:	200-524
Cow position:	chr18:19849594-19849929 (view UCSC Genome Browser custom track)
Alignm length:	341
Alignm identity:	244
Alignm E-value:	0
Alignm gaps (pig, cow):	15, 173
Conread position:	200-525
Cow position:	chr18:50637316-50637633 (view UCSC Genome Browser custom track)
Alignm length:	336
Alignm identity:	245
Alignm E-value:	1.4013e-45
Alignm gaps (pig, cow):	71, 123
Conread position:	200-527
Cow position:	chr18:55589346-55589655 (view UCSC Genome Browser custom track)
Alignm length:	330
Alignm identity:	224
Alignm E-value:	9e-32
Alignm gaps (pig, cow):	84, 35
Conread position:	200-528
Cow position:	chr18:50082105-50082427 (view UCSC Genome Browser custom track)
Alignm length:	334
Alignm identity:	258
Alignm E-value:	0
Alignm gaps (pig, cow):	63, 80
Conread position:	201-338
Cow position:	chr18:38017853-38017713 (view UCSC Genome Browser custom track)
Alignm length:	142
Alignm identity:	117
Alignm E-value:	8e-31
Alignm gaps (pig, cow):	40, 44
Conread position:	201-527
Cow position:	chr18:20126951-20127279 (view UCSC Genome Browser custom track)
Alignm length:	339
Alignm identity:	236
Alignm E-value:	2e-39
Alignm gaps (pig, cow):	95, 40