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Cow genome map

           
Conread name:
           
Ss1.1-rpigcf0_020868.5
        

               
Conread position:
               
188-356
               

               
Cow position:
               
chr9:39654230-39654410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
188-515
               

               
Cow position:
               
chr9:35375272-35375589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
309, 22
               

               
Conread position:
               
189-528
               

               
Cow position:
               
chr9:3387527-3387865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
86, 20
               

               
Conread position:
               
190-421
               

               
Cow position:
               
chr9:52828491-52828726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
18, 52
               

               
Conread position:
               
190-506
               

               
Cow position:
               
chr9:34203964-34204282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
86, 18
               

               
Conread position:
               
193-528
               

               
Cow position:
               
chr9:389181-388838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
83, 19
               

               
Conread position:
               
194-443
               

               
Cow position:
               
chr9:38289478-38289236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
195-527
               

               
Cow position:
               
chr9:5209416-5209753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
16, 52
               

               
Conread position:
               
197-393
               

               
Cow position:
               
chr9:3924274-3924484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
83, 18
               

               
Conread position:
               
197-522
               

               
Cow position:
               
chr9:8599442-8599768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
77, 149
               

               
Conread position:
               
197-528
               

               
Cow position:
               
chr9:5433465-5433812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 12
               

               
Conread position:
               
200-390
               

               
Cow position:
               
chr9:29792383-29792188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
200-412
               

               
Cow position:
               
chr9:54933055-54932837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
35, 201
               

               
Conread position:
               
200-522
               

               
Cow position:
               
chr9:20896738-20897069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
16, 200
               

               
Conread position:
               
200-526
               

               
Cow position:
               
chr9:32115760-32115438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
71, 136
               

               
Conread position:
               
200-527
               

               
Cow position:
               
chr9:9823659-9823333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
90, 12
               

               
Conread position:
               
200-528
               

               
Cow position:
               
chr9:25468894-25469208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
143, 117
               

               
Conread position:
               
200-528
               

               
Cow position:
               
chr9:54681341-54681677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
72, 44
               

               
Conread position:
               
201-491
               

               
Cow position:
               
chr9:41486393-41486104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
201-522
               

               
Cow position:
               
chr9:42037492-42037820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
14, 129
               

               
Conread position:
               
201-525
               

               
Cow position:
               
chr9:39152840-39152511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
75, 104
               

               
Conread position:
               
201-527
               

               
Cow position:
               
chr9:14960792-14961120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
73, 124
               

               
Conread position:
               
201-528
               

               
Cow position:
               
chr9:9516927-9516596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 251
               

               
Conread position:
               
201-528
               

               
Cow position:
               
chr9:41789123-41789457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
88, 37
               

               
Conread position:
               
201-528
               

               
Cow position:
               
chr9:59795437-59795109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
85, 63
               

               
Conread position:
               
202-528
               

               
Cow position:
               
chr9:5441833-5442166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 49
               

               
Conread position:
               
202-528
               

               
Cow position:
               
chr9:8919825-8920172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
202-528
               

               
Cow position:
               
chr9:28772962-28773295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
13, 50
               

               
Conread position:
               
203-472
               

               
Cow position:
               
chr9:10667179-10666908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
108, 59
               

               
Conread position:
               
204-449
               

               
Cow position:
               
chr9:23797087-23797331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
50, 29
               

               
Conread position:
               
204-491
               

               
Cow position:
               
chr9:1867295-1867586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
38, 184
               

               
Conread position:
               
204-528
               

               
Cow position:
               
chr9:34468735-34468411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
80, 210
               

               
Conread position:
               
204-528
               

               
Cow position:
               
chr9:55321478-55321811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 276
               

               
Conread position:
               
205-398
               

               
Cow position:
               
chr9:13742362-13742569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
205-528
               

               
Cow position:
               
chr9:4580559-4580243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
62, 36
               

               
Conread position:
               
206-455
               

               
Cow position:
               
chr9:1894191-1893945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
66, 118
               

               
Conread position:
               
206-526
               

               
Cow position:
               
chr9:5227334-5226996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 174
               

               
Conread position:
               
206-526
               

               
Cow position:
               
chr9:50607104-50606777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 128
               

               
Conread position:
               
208-525
               

               
Cow position:
               
chr9:64091528-64091855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 5
               

               
Conread position:
               
208-527
               

               
Cow position:
               
chr9:15684940-15684619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
84, 116
               

               
Conread position:
               
209-472
               

               
Cow position:
               
chr9:53431273-53431001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
67, 13
               

               
Conread position:
               
210-490
               

               
Cow position:
               
chr9:5398984-5399273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
61, 135
               

               
Conread position:
               
210-515
               

               
Cow position:
               
chr9:1916138-1916448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
65, 230
               

               
Conread position:
               
210-527
               

               
Cow position:
               
chr9:28947716-28948025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
61, 147
               

               
Conread position:
               
210-527
               

               
Cow position:
               
chr9:39428951-39428627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
67, 120
               

               
Conread position:
               
210-528
               

               
Cow position:
               
chr9:6879630-6879940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
11, 60
               

               
Conread position:
               
210-528
               

               
Cow position:
               
chr9:19555219-19555548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 137
               

               
Conread position:
               
210-528
               

               
Cow position:
               
chr9:25546487-25546810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
69, 210
               

               
Conread position:
               
213-468
               

               
Cow position:
               
chr9:23956120-23955870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 52
               

               
Conread position:
               
213-528
               

               
Cow position:
               
chr9:34666285-34666592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
67, 50
               

               
Conread position:
               
214-414
               

               
Cow position:
               
chr9:27347652-27347859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
64, 162
               

               
Conread position:
               
214-471
               

               
Cow position:
               
chr9:20466110-20465843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
58, 30
               

               
Conread position:
               
214-507
               

               
Cow position:
               
chr9:33696891-33697179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
28, 91
               

               
Conread position:
               
214-527
               

               
Cow position:
               
chr9:16745534-16745849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
85, 48
               

               
Conread position:
               
214-527
               

               
Cow position:
               
chr9:28983034-28983352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
9, 135
               

               
Conread position:
               
214-528
               

               
Cow position:
               
chr9:4861230-4861562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
214-528
               

               
Cow position:
               
chr9:25556817-25557139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 251
               

               
Conread position:
               
214-528
               

               
Cow position:
               
chr9:41679596-41679919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 198
               

               
Conread position:
               
215-405
               

               
Cow position:
               
chr9:5259130-5259328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
55, 87
               

               
Conread position:
               
223-510
               

               
Cow position:
               
chr9:6366832-6367133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
52, 90
               

               
Conread position:
               
229-443
               

               
Cow position:
               
chr9:64345119-64344907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
170, 95
               

               
Conread position:
               
235-528
               

               
Cow position:
               
chr9:19493581-19493289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 34
               

               
Conread position:
               
249-471
               

               
Cow position:
               
chr9:21080460-21080679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
269-408
               

               
Cow position:
               
chr9:6685815-6685955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
269-528
               

               
Cow position:
               
chr9:44832135-44831881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
272-394
               

               
Cow position:
               
chr9:22165793-22165671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
272-480
               

               
Cow position:
               
chr9:49688883-49689082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
143, 80
               

               
Conread position:
               
272-527
               

               
Cow position:
               
chr9:19067704-19067950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
274-471
               

               
Cow position:
               
chr9:19903004-19903196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
274-510
               

               
Cow position:
               
chr9:5836072-5836315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
65, 25
               

               
Conread position:
               
274-527
               

               
Cow position:
               
chr9:44921477-44921218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 12
               

               
Conread position:
               
274-528
               

               
Cow position:
               
chr9:58614416-58614663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
228, 72
               

               
Conread position:
               
275-397
               

               
Cow position:
               
chr9:60355289-60355167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
275-412
               

               
Cow position:
               
chr9:42586633-42586494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
275-430
               

               
Cow position:
               
chr9:56204733-56204884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
275-502
               

               
Cow position:
               
chr9:51557562-51557351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
275-510
               

               
Cow position:
               
chr9:58670666-58670883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
275-523
               

               
Cow position:
               
chr9:24872759-24873000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
275-523
               

               
Cow position:
               
chr9:51204650-51204889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
275-527
               

               
Cow position:
               
chr9:64105822-64106080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
65, 74
               

               
Conread position:
               
275-528
               

               
Cow position:
               
chr9:8998274-8998530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
134, 11
               

               
Conread position:
               
275-528
               

               
Cow position:
               
chr9:23431224-23430972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 76
               

               
Conread position:
               
275-528
               

               
Cow position:
               
chr9:44915174-44914914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
125, 117
               

               
Conread position:
               
276-468
               

               
Cow position:
               
chr9:46664749-46664935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
28, 79
               

               
Conread position:
               
276-484
               

               
Cow position:
               
chr9:4630029-4630234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
276-515
               

               
Cow position:
               
chr9:9573248-9573493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
87, 30
               

               
Conread position:
               
276-515
               

               
Cow position:
               
chr9:27355846-27356081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
149, 20
               

               
Conread position:
               
276-515
               

               
Cow position:
               
chr9:27358632-27358867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
149, 20
               

               
Conread position:
               
276-519
               

               
Cow position:
               
chr9:20942691-20942444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
91, 20
               

               
Conread position:
               
276-527
               

               
Cow position:
               
chr9:6397859-6397608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
71, 20
               

               
Conread position:
               
276-527
               

               
Cow position:
               
chr9:8937077-8937317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
226, 20
               

               
Conread position:
               
276-528
               

               
Cow position:
               
chr9:36445544-36445797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
133, 204
               

               
Conread position:
               
276-528
               

               
Cow position:
               
chr9:40215171-40215417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
221, 61
               

               
Conread position:
               
276-528
               

               
Cow position:
               
chr9:43870899-43871153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
277-373
               

               
Cow position:
               
chr9:26394424-26394329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
277-376
               

               
Cow position:
               
chr9:26277755-26277852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
277-377
               

               
Cow position:
               
chr9:19718415-19718315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-377
               

               
Cow position:
               
chr9:49830770-49830869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
277-382
               

               
Cow position:
               
chr9:34707386-34707282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
277-383
               

               
Cow position:
               
chr9:43202259-43202365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-392
               

               
Cow position:
               
chr9:35793602-35793717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-395
               

               
Cow position:
               
chr9:6293520-6293638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-397
               

               
Cow position:
               
chr9:61547628-61547743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
277-400
               

               
Cow position:
               
chr9:55354536-55354659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-402
               

               
Cow position:
               
chr9:59699622-59699497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-406
               

               
Cow position:
               
chr9:7806036-7805907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-407
               

               
Cow position:
               
chr9:31098961-31098829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
277-407
               

               
Cow position:
               
chr9:33151667-33151797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-407
               

               
Cow position:
               
chr9:34484520-34484650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-411
               

               
Cow position:
               
chr9:43159677-43159811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
90, 110
               

               
Conread position:
               
277-411
               

               
Cow position:
               
chr9:47214620-47214486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-411
               

               
Cow position:
               
chr9:58369071-58368938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
277-413
               

               
Cow position:
               
chr9:5104477-5104342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
277-414
               

               
Cow position:
               
chr9:16137417-16137281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
277-415
               

               
Cow position:
               
chr9:52518899-52518760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
82, 9
               

               
Conread position:
               
277-415
               

               
Cow position:
               
chr9:57131420-57131558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-416
               

               
Cow position:
               
chr9:23970972-23970831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
277-416
               

               
Cow position:
               
chr9:52258137-52258003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
277-419
               

               
Cow position:
               
chr9:39758443-39758585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-425
               

               
Cow position:
               
chr9:44584518-44584663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
277-434
               

               
Cow position:
               
chr9:61351413-61351259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
277-435
               

               
Cow position:
               
chr9:30780043-30780195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
38, 33
               

               
Conread position:
               
277-435
               

               
Cow position:
               
chr9:63361794-63361635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
277-442
               

               
Cow position:
               
chr9:24652329-24652499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
277-442
               

               
Cow position:
               
chr9:34024624-34024789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-444
               

               
Cow position:
               
chr9:5164060-5163894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
277-446
               

               
Cow position:
               
chr9:44770267-44770106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
139, 52
               

               
Conread position:
               
277-446
               

               
Cow position:
               
chr9:53751036-53750863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
31, 131
               

               
Conread position:
               
277-448
               

               
Cow position:
               
chr9:13460493-13460325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
113, 15
               

               
Conread position:
               
277-449
               

               
Cow position:
               
chr9:37199052-37199218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
277-449
               

               
Cow position:
               
chr9:43342256-43342424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
277-449
               

               
Cow position:
               
chr9:54615375-54615205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
168, 61
               

               
Conread position:
               
277-450
               

               
Cow position:
               
chr9:25400273-25400101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
134, 60
               

               
Conread position:
               
277-452
               

               
Cow position:
               
chr9:9686487-9686315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
168, 79
               

               
Conread position:
               
277-452
               

               
Cow position:
               
chr9:17840753-17840577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
277-453
               

               
Cow position:
               
chr9:9625085-9624912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
139, 45
               

               
Conread position:
               
277-453
               

               
Cow position:
               
chr9:41781579-41781752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
277-462
               

               
Cow position:
               
chr9:55532739-55532922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
15, 28
               

               
Conread position:
               
277-463
               

               
Cow position:
               
chr9:32982150-32981963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
79, 134
               

               
Conread position:
               
277-466
               

               
Cow position:
               
chr9:41394722-41394537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
277-469
               

               
Cow position:
               
chr9:64064438-64064246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
130, 178
               

               
Conread position:
               
277-470
               

               
Cow position:
               
chr9:38645419-38645227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
67, 50
               

               
Conread position:
               
277-470
               

               
Cow position:
               
chr9:42478557-42478367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
277-471
               

               
Cow position:
               
chr9:38941507-38941315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
139, 127
               

               
Conread position:
               
277-471
               

               
Cow position:
               
chr9:41785137-41785337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
147, 24
               

               
Conread position:
               
277-471
               

               
Cow position:
               
chr9:54493060-54493254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
138, 188
               

               
Conread position:
               
277-472
               

               
Cow position:
               
chr9:3343674-3343860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
277-472
               

               
Cow position:
               
chr9:6952026-6952224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
74, 181
               

               
Conread position:
               
277-472
               

               
Cow position:
               
chr9:9311783-9311977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
181, 0
               

               
Conread position:
               
277-472
               

               
Cow position:
               
chr9:25583755-25583948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
277-472
               

               
Cow position:
               
chr9:29339388-29339207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
277-473
               

               
Cow position:
               
chr9:33584760-33584564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 108
               

               
Conread position:
               
277-474
               

               
Cow position:
               
chr9:53109176-53109372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
277-486
               

               
Cow position:
               
chr9:8636592-8636801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
148, 128
               

               
Conread position:
               
277-486
               

               
Cow position:
               
chr9:13744005-13743801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
277-488
               

               
Cow position:
               
chr9:17411268-17411058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
147, 127
               

               
Conread position:
               
277-489
               

               
Cow position:
               
chr9:38846408-38846209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
277-489
               

               
Cow position:
               
chr9:51566570-51566360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
277-490
               

               
Cow position:
               
chr9:41282940-41283149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
277-491
               

               
Cow position:
               
chr9:15225371-15225162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
277-491
               

               
Cow position:
               
chr9:34410471-34410259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
277-491
               

               
Cow position:
               
chr9:40005399-40005612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
277-496
               

               
Cow position:
               
chr9:10819903-10819691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
22, 32
               

               
Conread position:
               
277-496
               

               
Cow position:
               
chr9:39681264-39681481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
277-499
               

               
Cow position:
               
chr9:6596305-6596090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
277-501
               

               
Cow position:
               
chr9:3186051-3186274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
277-501
               

               
Cow position:
               
chr9:3774090-3774308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
216, 56
               

               
Conread position:
               
277-501
               

               
Cow position:
               
chr9:4263164-4262946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
135, 22
               

               
Conread position:
               
277-501
               

               
Cow position:
               
chr9:17310636-17310416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
277-501
               

               
Cow position:
               
chr9:59386844-59386629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
277-502
               

               
Cow position:
               
chr9:52839955-52839739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
277-503
               

               
Cow position:
               
chr9:32670022-32669799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
277-508
               

               
Cow position:
               
chr9:59013414-59013180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
138, 63
               

               
Conread position:
               
277-509
               

               
Cow position:
               
chr9:5219247-5219014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 144
               

               
Conread position:
               
277-509
               

               
Cow position:
               
chr9:26345044-26344814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
10, 116
               

               
Conread position:
               
277-509
               

               
Cow position:
               
chr9:39011544-39011322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
277-510
               

               
Cow position:
               
chr9:3378679-3378900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
277-510
               

               
Cow position:
               
chr9:5077780-5077565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
277-510
               

               
Cow position:
               
chr9:19714005-19714231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
221, 128
               

               
Conread position:
               
277-510
               

               
Cow position:
               
chr9:52267830-52267601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
277-510
               

               
Cow position:
               
chr9:62656728-62656952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
59, 125
               

               
Conread position:
               
277-513
               

               
Cow position:
               
chr9:27279234-27279468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
216, 131
               

               
Conread position:
               
277-514
               

               
Cow position:
               
chr9:22318277-22318506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
79, 19
               

               
Conread position:
               
277-514
               

               
Cow position:
               
chr9:33114271-33114506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
235, 79
               

               
Conread position:
               
277-515
               

               
Cow position:
               
chr9:11304150-11303917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
219, 76
               

               
Conread position:
               
277-516
               

               
Cow position:
               
chr9:30402501-30402258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
15, 123
               

               
Conread position:
               
277-517
               

               
Cow position:
               
chr9:20322168-20321942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
220, 62
               

               
Conread position:
               
277-518
               

               
Cow position:
               
chr9:18342658-18342888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
131, 120
               

               
Conread position:
               
277-518
               

               
Cow position:
               
chr9:28747595-28747360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
277-519
               

               
Cow position:
               
chr9:49293218-49292981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
277-522
               

               
Cow position:
               
chr9:5594428-5594668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
223, 142
               

               
Conread position:
               
277-522
               

               
Cow position:
               
chr9:12280896-12281137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
148, 132
               

               
Conread position:
               
277-522
               

               
Cow position:
               
chr9:12910476-12910234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
277-522
               

               
Cow position:
               
chr9:57897185-57896952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
277-522
               

               
Cow position:
               
chr9:62357603-62357361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
141, 70
               

               
Conread position:
               
277-523
               

               
Cow position:
               
chr9:5263425-5263669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 43
               

               
Conread position:
               
277-523
               

               
Cow position:
               
chr9:5456250-5456005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
223, 128
               

               
Conread position:
               
277-523
               

               
Cow position:
               
chr9:11123558-11123316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
277-523
               

               
Cow position:
               
chr9:20579669-20579437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
140, 73
               

               
Conread position:
               
277-523
               

               
Cow position:
               
chr9:31557802-31557560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
132, 27
               

               
Conread position:
               
277-523
               

               
Cow position:
               
chr9:31814461-31814206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
277-523
               

               
Cow position:
               
chr9:51720972-51720733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
220, 80
               

               
Conread position:
               
277-523
               

               
Cow position:
               
chr9:64559957-64559715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
226, 75
               

               
Conread position:
               
277-524
               

               
Cow position:
               
chr9:62908094-62907874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
277-525
               

               
Cow position:
               
chr9:26279244-26279006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
277-525
               

               
Cow position:
               
chr9:45756288-45756528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
134, 192
               

               
Conread position:
               
277-525
               

               
Cow position:
               
chr9:64155926-64155689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
178, 123
               

               
Conread position:
               
277-526
               

               
Cow position:
               
chr9:7362953-7363197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
226, 76
               

               
Conread position:
               
277-526
               

               
Cow position:
               
chr9:8288543-8288789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
277-526
               

               
Cow position:
               
chr9:13670558-13670804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
90, 161
               

               
Conread position:
               
277-526
               

               
Cow position:
               
chr9:15215762-15215510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
215, 132
               

               
Conread position:
               
277-526
               

               
Cow position:
               
chr9:17741016-17740776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
277-526
               

               
Cow position:
               
chr9:18380790-18381031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
223, 62
               

               
Conread position:
               
277-526
               

               
Cow position:
               
chr9:20847860-20848103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
277-526
               

               
Cow position:
               
chr9:22152160-22151913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
156, 90
               

               
Conread position:
               
277-526
               

               
Cow position:
               
chr9:22443702-22443450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
213, 133
               

               
Conread position:
               
277-526
               

               
Cow position:
               
chr9:22696148-22696395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
222, 52
               

               
Conread position:
               
277-526
               

               
Cow position:
               
chr9:29824955-29825208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
115, 66
               

               
Conread position:
               
277-526
               

               
Cow position:
               
chr9:34374999-34374760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
277-526
               

               
Cow position:
               
chr9:35028240-35027994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
70, 122
               

               
Conread position:
               
277-526
               

               
Cow position:
               
chr9:35105865-35105609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
224, 128
               

               
Conread position:
               
277-526
               

               
Cow position:
               
chr9:40542061-40542291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
223, 27
               

               
Conread position:
               
277-526
               

               
Cow position:
               
chr9:42062024-42062284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
277-526
               

               
Cow position:
               
chr9:45285610-45285359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 194
               

               
Conread position:
               
277-526
               

               
Cow position:
               
chr9:55795684-55795928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
139, 46
               

               
Conread position:
               
277-526
               

               
Cow position:
               
chr9:56011424-56011665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
220, 132
               

               
Conread position:
               
277-526
               

               
Cow position:
               
chr9:60395123-60394879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
277-527
               

               
Cow position:
               
chr9:3738299-3738049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 156
               

               
Conread position:
               
277-527
               

               
Cow position:
               
chr9:9406128-9405878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
139, 177
               

               
Conread position:
               
277-527
               

               
Cow position:
               
chr9:11299755-11299518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
277-527
               

               
Cow position:
               
chr9:16811729-16811487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
170, 131
               

               
Conread position:
               
277-527
               

               
Cow position:
               
chr9:34309954-34310203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
125, 43
               

               
Conread position:
               
277-527
               

               
Cow position:
               
chr9:47446090-47445854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
219, 19
               

               
Conread position:
               
277-527
               

               
Cow position:
               
chr9:61022548-61022783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
277-527
               

               
Cow position:
               
chr9:61302925-61303176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:767224-766979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
89, 26
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:1729749-1729499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
143, 158
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:1751262-1751508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
16, 129
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:3782295-3782534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
220, 28
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:4268057-4267810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:4341234-4340996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:5245778-5246029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
105, 194
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:5327183-5327428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:5500778-5501031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
57, 81
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:5509651-5509895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:6839918-6840181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:6934148-6933900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
227, 66
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:7409688-7409956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:7634196-7634447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:8337952-8338200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:8546255-8546492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:8562747-8563011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 69
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:8723719-8723966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
149, 81
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:9199854-9199610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
87, 36
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:9403254-9403002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 79
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:9443676-9443423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
188, 77
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:9461729-9461481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
83, 24
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:9596027-9595781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 134
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:9723951-9723710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
204, 62
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:10010740-10010978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
226, 37
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:10118728-10118491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:10144550-10144302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 70
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:11168655-11168904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 142
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:12226052-12225808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
220, 27
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:13205641-13205394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
158, 50
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:14796845-14796599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
172, 124
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:17518564-17518315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
226, 128
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:18217174-18216930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:20416581-20416341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:21460226-21459984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 63
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:21888095-21888343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
216, 80
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:23388747-23388504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:24887131-24887372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:25921748-25921998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
138, 236
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:26085983-26086237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
127, 58
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:26403710-26403959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
220, 142
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:28354442-28354692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
83, 133
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:28726805-28726547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:30123854-30124094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 70
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:31638731-31638467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
80, 62
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:32307306-32307063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:33119963-33119712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:33219024-33218778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
131, 52
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:33597911-33598155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
220, 123
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:34286724-34286974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 220
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:34902176-34901942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:34958131-34957881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 184
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:36490976-36490718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:37677819-37678061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
224, 62
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:38961503-38961260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
144, 12
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:41728185-41728430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 43
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:42497750-42498003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
21, 26
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:44467414-44467179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:44709754-44709999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
223, 79
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:45141675-45141431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:46316856-46316612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:48627953-48628201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 147
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:50075989-50076232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
216, 75
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:50081115-50080872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
226, 132
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:50139210-50139459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
95, 125
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:52578622-52578363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
25, 138
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:54528439-54528685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
220, 76
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:55075203-55074956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
223, 76
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:55084376-55084123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
131, 48
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:55118012-55118253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:55256627-55256377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:55287964-55287724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
154, 71
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:56032390-56032155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:56065489-56065722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
149, 40
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:56453264-56453502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:56773001-56773253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 66
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:60027122-60027371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 213
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:62442215-62442464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
224, 54
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:62668175-62668426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
130, 14
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:63745740-63745987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
220, 77
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr9:64050636-64050382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
139, 117
               

               
Conread position:
               
278-371
               

               
Cow position:
               
chr9:53045420-53045327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
94
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
278-378
               

               
Cow position:
               
chr9:34079169-34079072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
278-412
               

               
Cow position:
               
chr9:4241330-4241466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
278-427
               

               
Cow position:
               
chr9:49545438-49545293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
278-441
               

               
Cow position:
               
chr9:59998107-59997946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
135, 70
               

               
Conread position:
               
278-456
               

               
Cow position:
               
chr9:58452149-58451978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
278-458
               

               
Cow position:
               
chr9:19758646-19758812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
278-466
               

               
Cow position:
               
chr9:26310432-26310620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
278-467
               

               
Cow position:
               
chr9:45171297-45171106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
278-491
               

               
Cow position:
               
chr9:6189439-6189235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
278-504
               

               
Cow position:
               
chr9:7952827-7953049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
75, 82
               

               
Conread position:
               
278-505
               

               
Cow position:
               
chr9:63896467-63896686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
134, 68
               

               
Conread position:
               
278-525
               

               
Cow position:
               
chr9:61738848-61739089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
140, 131
               

               
Conread position:
               
278-526
               

               
Cow position:
               
chr9:1938050-1938301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
30, 72
               

               
Conread position:
               
278-528
               

               
Cow position:
               
chr9:9654381-9654138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
278-528
               

               
Cow position:
               
chr9:16300643-16300392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
146, 183
               

               
Conread position:
               
278-528
               

               
Cow position:
               
chr9:35167102-35167346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
224, 127
               

               
Conread position:
               
278-528
               

               
Cow position:
               
chr9:42446057-42445805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
278-528
               

               
Cow position:
               
chr9:51620371-51620610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 69
               

               
Conread position:
               
278-528
               

               
Cow position:
               
chr9:53762620-53762871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 186
               

               
Conread position:
               
279-410
               

               
Cow position:
               
chr9:22466699-22466830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
279-453
               

               
Cow position:
               
chr9:33823045-33823217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
125, 155
               

               
Conread position:
               
279-455
               

               
Cow position:
               
chr9:9459911-9460076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
61, 89
               

               
Conread position:
               
279-516
               

               
Cow position:
               
chr9:3220063-3220300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
218, 125
               

               
Conread position:
               
279-516
               

               
Cow position:
               
chr9:36843720-36843949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
78, 130
               

               
Conread position:
               
279-523
               

               
Cow position:
               
chr9:17872183-17871935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
279-526
               

               
Cow position:
               
chr9:30652782-30652534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
121, 55
               

               
Conread position:
               
279-528
               

               
Cow position:
               
chr9:11319707-11319460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
279-528
               

               
Cow position:
               
chr9:15805996-15805751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
7, 12
               

               
Conread position:
               
279-528
               

               
Cow position:
               
chr9:29185210-29184959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
279-528
               

               
Cow position:
               
chr9:32371824-32371587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
279-528
               

               
Cow position:
               
chr9:34689670-34689429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
153, 56
               

               
Conread position:
               
279-528
               

               
Cow position:
               
chr9:41513559-41513798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
218, 31
               

               
Conread position:
               
279-528
               

               
Cow position:
               
chr9:49416914-49417161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
149, 126
               

               
Conread position:
               
279-528
               

               
Cow position:
               
chr9:54716675-54716441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
102, 60
               

               
Conread position:
               
280-395
               

               
Cow position:
               
chr9:11098524-11098413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
280-412
               

               
Cow position:
               
chr9:33347562-33347430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
280-426
               

               
Cow position:
               
chr9:5110787-5110931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
280-448
               

               
Cow position:
               
chr9:8628989-8628822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
280-464
               

               
Cow position:
               
chr9:28754745-28754929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
280-495
               

               
Cow position:
               
chr9:52513520-52513312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
280-500
               

               
Cow position:
               
chr9:62724460-62724682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
24, 76
               

               
Conread position:
               
280-526
               

               
Cow position:
               
chr9:34697371-34697125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
215, 61
               

               
Conread position:
               
280-527
               

               
Cow position:
               
chr9:13169735-13169493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
280-527
               

               
Cow position:
               
chr9:20090974-20091214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 145
               

               
Conread position:
               
280-527
               

               
Cow position:
               
chr9:38792943-38793186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
44, 140
               

               
Conread position:
               
280-528
               

               
Cow position:
               
chr9:3070481-3070244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
217, 22
               

               
Conread position:
               
280-528
               

               
Cow position:
               
chr9:5763702-5763460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
280-528
               

               
Cow position:
               
chr9:6192532-6192289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 120
               

               
Conread position:
               
280-528
               

               
Cow position:
               
chr9:8901298-8901050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
135, 16
               

               
Conread position:
               
280-528
               

               
Cow position:
               
chr9:29006485-29006735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 239
               

               
Conread position:
               
280-528
               

               
Cow position:
               
chr9:31079152-31078911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
281-394
               

               
Cow position:
               
chr9:34014320-34014207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
281-414
               

               
Cow position:
               
chr9:36628047-36628180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
281-437
               

               
Cow position:
               
chr9:50382393-50382242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
128, 37
               

               
Conread position:
               
281-453
               

               
Cow position:
               
chr9:27345655-27345486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
281-454
               

               
Cow position:
               
chr9:29195095-29194923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
281-501
               

               
Cow position:
               
chr9:34283882-34284094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
281-510
               

               
Cow position:
               
chr9:43757466-43757693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
76, 57
               

               
Conread position:
               
281-527
               

               
Cow position:
               
chr9:30477845-30477608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
189, 15
               

               
Conread position:
               
281-528
               

               
Cow position:
               
chr9:1520811-1520560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
69, 126
               

               
Conread position:
               
281-528
               

               
Cow position:
               
chr9:33940534-33940781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
218, 124
               

               
Conread position:
               
281-528
               

               
Cow position:
               
chr9:50543499-50543250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
47, 228
               

               
Conread position:
               
281-528
               

               
Cow position:
               
chr9:55889743-55889981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
200, 58
               

               
Conread position:
               
281-528
               

               
Cow position:
               
chr9:61997674-61997425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
59, 34
               

               
Conread position:
               
282-500
               

               
Cow position:
               
chr9:29684074-29684293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
113, 95
               

               
Conread position:
               
282-526
               

               
Cow position:
               
chr9:31346880-31347126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
122, 74
               

               
Conread position:
               
282-526
               

               
Cow position:
               
chr9:32624938-32625176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
126, 38
               

               
Conread position:
               
282-528
               

               
Cow position:
               
chr9:9552020-9552261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 127
               

               
Conread position:
               
283-462
               

               
Cow position:
               
chr9:40776729-40776905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
283-491
               

               
Cow position:
               
chr9:11969118-11969324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
133, 15
               

               
Conread position:
               
283-528
               

               
Cow position:
               
chr9:214529-214294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
7, 14
               

               
Conread position:
               
283-528
               

               
Cow position:
               
chr9:11363828-11364065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
7, 14
               

               
Conread position:
               
287-433
               

               
Cow position:
               
chr9:38799551-38799406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
287-521
               

               
Cow position:
               
chr9:17799563-17799796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
44, 20
               

               
Conread position:
               
287-527
               

               
Cow position:
               
chr9:49709782-49710011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
215, 57
               

               
Conread position:
               
287-528
               

               
Cow position:
               
chr9:1949852-1950090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
83, 130
               

               
Conread position:
               
288-506
               

               
Cow position:
               
chr9:43936881-43937091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
54, 48
               

               
Conread position:
               
293-525
               

               
Cow position:
               
chr9:11313569-11313339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
210, 114
               

               
Conread position:
               
294-527
               

               
Cow position:
               
chr9:32676619-32676855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
150, 111
               

               
Conread position:
               
294-527
               

               
Cow position:
               
chr9:44108891-44108658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
91, 26
               

               
Conread position:
               
297-520
               

               
Cow position:
               
chr9:22114690-22114469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
297-528
               

               
Cow position:
               
chr9:43875774-43875548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
35, 192
               

               
Conread position:
               
298-468
               

               
Cow position:
               
chr9:54411212-54411036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
94, 129
               

               
Conread position:
               
303-510
               

               
Cow position:
               
chr9:53211540-53211338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
194, 101
               

               
Conread position:
               
303-527
               

               
Cow position:
               
chr9:47906331-47906107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
32, 149
               

               
Conread position:
               
303-527
               

               
Cow position:
               
chr9:58979352-58979570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
121, 51
               

               
Conread position:
               
303-528
               

               
Cow position:
               
chr9:17928708-17928933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
118, 126
               

               
Conread position:
               
303-528
               

               
Cow position:
               
chr9:38615011-38614786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
113, 36
               

               
Conread position:
               
304-526
               

               
Cow position:
               
chr9:54611283-54611063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
39, 15
               

               
Conread position:
               
304-527
               

               
Cow position:
               
chr9:4858487-4858715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
64, 89
               

               
Conread position:
               
304-528
               

               
Cow position:
               
chr9:647729-647949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
196, 104
               

               
Conread position:
               
304-528
               

               
Cow position:
               
chr9:11068519-11068297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
77, 50
               

               
Conread position:
               
304-528
               

               
Cow position:
               
chr9:22638054-22638277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
11, 17
               

               
Conread position:
               
305-528
               

               
Cow position:
               
chr9:35904792-35904572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
306-468
               

               
Cow position:
               
chr9:13994120-13994285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
306-469
               

               
Cow position:
               
chr9:50125640-50125479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
306-525
               

               
Cow position:
               
chr9:8534736-8534514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
187, 119
               

               
Conread position:
               
306-527
               

               
Cow position:
               
chr9:27029751-27029531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
110, 102
               

               
Conread position:
               
306-527
               

               
Cow position:
               
chr9:47500258-47500034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
192, 0
               

               
Conread position:
               
306-527
               

               
Cow position:
               
chr9:63905653-63905435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
192, 95
               

               
Conread position:
               
306-528
               

               
Cow position:
               
chr9:823914-824134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
193, 135
               

               
Conread position:
               
306-528
               

               
Cow position:
               
chr9:9416442-9416229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
19, 45
               

               
Conread position:
               
306-528
               

               
Cow position:
               
chr9:26440858-26440626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
306-528
               

               
Cow position:
               
chr9:52407118-52407343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
197, 0
               

               
Conread position:
               
307-525
               

               
Cow position:
               
chr9:4512443-4512658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
190, 51
               

               
Conread position:
               
307-528
               

               
Cow position:
               
chr9:6338748-6338972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
191, 0
               

               
Conread position:
               
308-501
               

               
Cow position:
               
chr9:44834007-44833820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
308-521
               

               
Cow position:
               
chr9:1756189-1755975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
190, 101
               

               
Conread position:
               
308-526
               

               
Cow position:
               
chr9:20681450-20681231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
123, 105
               

               
Conread position:
               
308-527
               

               
Cow position:
               
chr9:52638211-52637987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
312-524
               

               
Cow position:
               
chr9:50202533-50202739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
314-463
               

               
Cow position:
               
chr9:35652510-35652358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
315-528
               

               
Cow position:
               
chr9:35849867-35850073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
156, 96
               

               
Conread position:
               
315-528
               

               
Cow position:
               
chr9:41518663-41518444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
46, 91
               

               
Conread position:
               
320-491
               

               
Cow position:
               
chr9:43013690-43013860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
84, 18
               

               
Conread position:
               
320-501
               

               
Cow position:
               
chr9:21030276-21030455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
320-525
               

               
Cow position:
               
chr9:54924586-54924793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
87, 82
               

               
Conread position:
               
320-527
               

               
Cow position:
               
chr9:3931929-3932136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
87, 14
               

               
Conread position:
               
320-527
               

               
Cow position:
               
chr9:34106685-34106895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
79, 50
               

               
Conread position:
               
320-528
               

               
Cow position:
               
chr9:62134656-62134446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
100, 33
               

               
Conread position:
               
321-523
               

               
Cow position:
               
chr9:24997550-24997352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
322-515
               

               
Cow position:
               
chr9:30162126-30162320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
322-527
               

               
Cow position:
               
chr9:43207404-43207204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
176, 87
               

               
Conread position:
               
322-528
               

               
Cow position:
               
chr9:38343860-38344064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
109, 25
               

               
Conread position:
               
323-528
               

               
Cow position:
               
chr9:36827106-36827304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
324-528
               

               
Cow position:
               
chr9:6225482-6225278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
176, 14
               

               
Conread position:
               
325-528
               

               
Cow position:
               
chr9:35533980-35533776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
178, 83
               

               
Conread position:
               
329-525
               

               
Cow position:
               
chr9:34742747-34742558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
329-528
               

               
Cow position:
               
chr9:1952293-1952095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
329-528
               

               
Cow position:
               
chr9:58134043-58133852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
23, 14
               

               
Conread position:
               
331-528
               

               
Cow position:
               
chr9:22360989-22361185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
92, 156
               

               
Conread position:
               
331-528
               

               
Cow position:
               
chr9:41853411-41853616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
336-528
               

               
Cow position:
               
chr9:32710913-32711104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
161, 83
               

               
Conread position:
               
338-527
               

               
Cow position:
               
chr9:40543339-40543149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
160, 84
               

               
Conread position:
               
341-526
               

               
Cow position:
               
chr9:33038472-33038290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
86, 16
               

               
Conread position:
               
341-527
               

               
Cow position:
               
chr9:29108526-29108711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
67, 10
               

               
Conread position:
               
342-526
               

               
Cow position:
               
chr9:18163170-18162984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
18, 115
               

               
Conread position:
               
344-527
               

               
Cow position:
               
chr9:41957795-41957977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
76, 10
               

               
Conread position:
               
345-528
               

               
Cow position:
               
chr9:20811080-20810891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
17, 91
               

               
Conread position:
               
349-503
               

               
Cow position:
               
chr9:11377947-11377793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
7, 13
               

               
Conread position:
               
349-526
               

               
Cow position:
               
chr9:4128784-4128612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
352-528
               

               
Cow position:
               
chr9:30195214-30195383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
355-496
               

               
Cow position:
               
chr9:29091795-29091936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
356-523
               

               
Cow position:
               
chr9:29035032-29034863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
52, 161
               

               
Conread position:
               
358-512
               

               
Cow position:
               
chr9:9086197-9086355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
358-514
               

               
Cow position:
               
chr9:34919254-34919102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
139, 55
               

               
Conread position:
               
358-526
               

               
Cow position:
               
chr9:8524848-8525008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
85, 17
               

               
Conread position:
               
359-527
               

               
Cow position:
               
chr9:31270787-31270952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
361-526
               

               
Cow position:
               
chr9:1712467-1712305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
362-517
               

               
Cow position:
               
chr9:9694705-9694860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
56, 78
               

               
Conread position:
               
362-528
               

               
Cow position:
               
chr9:21840082-21840249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
50, 85
               

               
Conread position:
               
365-507
               

               
Cow position:
               
chr9:42509129-42509267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
365-526
               

               
Cow position:
               
chr9:37000048-36999889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
137, 48
               

               
Conread position:
               
366-527
               

               
Cow position:
               
chr9:59507103-59507260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
50, 95
               

               
Conread position:
               
368-526
               

               
Cow position:
               
chr9:4324141-4323986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
368-528
               

               
Cow position:
               
chr9:57951305-57951148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
82, 31
               

               
Conread position:
               
369-495
               

               
Cow position:
               
chr9:9580500-9580373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
51, 83
               

               
Conread position:
               
369-526
               

               
Cow position:
               
chr9:50667438-50667596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
80, 40
               

               
Conread position:
               
369-528
               

               
Cow position:
               
chr9:14358180-14358336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
128, 50
               

               
Conread position:
               
371-526
               

               
Cow position:
               
chr9:22228060-22227911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
372-528
               

               
Cow position:
               
chr9:18002934-18002775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
374-528
               

               
Cow position:
               
chr9:32812371-32812518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
374-528
               

               
Cow position:
               
chr9:49279486-49279648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
377-528
               

               
Cow position:
               
chr9:5238421-5238566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
381-526
               

               
Cow position:
               
chr9:4928655-4928799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
34, 7
               

               
Conread position:
               
382-526
               

               
Cow position:
               
chr9:60037680-60037825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
382-527
               

               
Cow position:
               
chr9:49403789-49403926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
387-528
               

               
Cow position:
               
chr9:31292724-31292862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
392-528
               

               
Cow position:
               
chr9:41652826-41652959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
394-523
               

               
Cow position:
               
chr9:18073073-18072945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
395-528
               

               
Cow position:
               
chr9:32829967-32829835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
23, 68
               

               
Conread position:
               
415-528
               

               
Cow position:
               
chr9:53608334-53608221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.