Cow genome map
| Conread name: | Ss1.1-rpigcf0_021306.5 |
| Conread position: | 42-224 |
| Cow position: | chr10:48354917-48355087 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 42-286 |
| Cow position: | chr10:68351668-68351909 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 42-289 |
| Cow position: | chr10:8690236-8689988 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 185 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 198, 33 |
| Conread position: | 42-304 |
| Cow position: | chr10:17077054-17076802 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 45, 33 |
| Conread position: | 42-330 |
| Cow position: | chr10:28021711-28021994 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 197 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 197, 34 |
| Conread position: | 45-286 |
| Cow position: | chr10:31820659-31820876 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 45-301 |
| Cow position: | chr10:36036160-36035905 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 243, 31 |
| Conread position: | 59-282 |
| Cow position: | chr10:32324295-32324074 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 84-324 |
| Cow position: | chr10:8231250-8231484 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 107, 154 |
| Conread position: | 96-302 |
| Cow position: | chr10:26932304-26932510 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 192, 94 |
| Conread position: | 106-269 |
| Cow position: | chr10:15515579-15515418 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 126-304 |
| Cow position: | chr10:7745843-7745668 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 148, 0 |
| Conread position: | 127-315 |
| Cow position: | chr10:10264494-10264681 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 71, 25 |
| Conread position: | 128-247 |
| Cow position: | chr10:49707574-49707455 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 128-274 |
| Cow position: | chr10:58741038-58740893 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 128-275 |
| Cow position: | chr10:24984602-24984459 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 128-276 |
| Cow position: | chr10:11417704-11417557 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 128-281 |
| Cow position: | chr10:67866399-67866552 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 128-336 |
| Cow position: | chr10:18162825-18162619 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 157, 58 |
| Conread position: | 132-256 |
| Cow position: | chr10:27736571-27736695 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 95 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 140-279 |
| Cow position: | chr10:16721839-16721700 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 135, 128 |
| Conread position: | 140-287 |
| Cow position: | chr10:7726202-7726055 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 140-301 |
| Cow position: | chr10:27183600-27183758 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 142-286 |
| Cow position: | chr10:48640324-48640468 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 36, 20 |
| Conread position: | 145-286 |
| Cow position: | chr10:19593754-19593615 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 145-299 |
| Cow position: | chr10:67698833-67698677 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 50, 5 |
Show alignments to all cow chromosomes.