Cow genome map
| Conread name: | Ss1.1-rpigcf0_021306.5 |
| Conread position: | 42-192 |
| Cow position: | chr14:12337505-12337359 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 42-197 |
| Cow position: | chr14:25934649-25934489 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 105, 33 |
| Conread position: | 42-198 |
| Cow position: | chr14:24445610-24445457 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 42-208 |
| Cow position: | chr14:9229067-9228902 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 42-209 |
| Cow position: | chr14:24206479-24206645 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 120, 33 |
| Conread position: | 42-212 |
| Cow position: | chr14:8033103-8032939 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 42-218 |
| Cow position: | chr14:16813963-16813787 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 50, 26 |
| Conread position: | 42-257 |
| Cow position: | chr14:7950878-7950672 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 42-286 |
| Cow position: | chr14:10082544-10082785 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 42-301 |
| Cow position: | chr14:7940167-7939908 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 234, 31 |
| Conread position: | 60-300 |
| Cow position: | chr14:121604-121373 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 228, 14 |
| Conread position: | 75-287 |
| Cow position: | chr14:32920832-32920622 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 77-275 |
| Cow position: | chr14:26474006-26473810 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 159 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 85-350 |
| Cow position: | chr14:37115988-37116248 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 194 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 203, 43 |
| Conread position: | 116-329 |
| Cow position: | chr14:5495441-5495226 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 11, 37 |
| Conread position: | 128-271 |
| Cow position: | chr14:1786599-1786742 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 128-276 |
| Cow position: | chr14:12339751-12339604 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 128-281 |
| Cow position: | chr14:15673952-15673804 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 128-281 |
| Cow position: | chr14:40016797-40016951 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 128-283 |
| Cow position: | chr14:11963242-11963397 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 139, 26 |
| Conread position: | 128-287 |
| Cow position: | chr14:19813695-19813538 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 128-287 |
| Cow position: | chr14:21555261-21555101 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 129-304 |
| Cow position: | chr14:40026006-40025836 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 154, 21 |
| Conread position: | 132-330 |
| Cow position: | chr14:17144888-17144689 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 146, 20 |
| Conread position: | 135-300 |
| Cow position: | chr14:15828829-15828670 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 140-329 |
| Cow position: | chr14:24935237-24935043 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 138, 12 |
| Conread position: | 142-272 |
| Cow position: | chr14:3751849-3751979 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 142-282 |
| Cow position: | chr14:22912684-22912547 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 166-283 |
| Cow position: | chr14:15028038-15027921 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.