Cow genome map
| Conread name: | Ss1.1-rpigcf0_021306.5 |
| Conread position: | 38-222 |
| Cow position: | chr19:33735077-33734894 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 39, 83 |
| Conread position: | 42-229 |
| Cow position: | chr19:14544143-14543958 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 42-237 |
| Cow position: | chr19:2602567-2602382 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 42-276 |
| Cow position: | chr19:48049791-48049557 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 81, 33 |
| Conread position: | 42-286 |
| Cow position: | chr19:18937572-18937814 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 186 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 212, 33 |
| Conread position: | 42-286 |
| Cow position: | chr19:21747395-21747139 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 64, 13 |
| Conread position: | 43-304 |
| Cow position: | chr19:24244030-24243787 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 205, 16 |
| Conread position: | 45-338 |
| Cow position: | chr19:2772087-2771808 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 260, 30 |
| Conread position: | 47-277 |
| Cow position: | chr19:22688619-22688847 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 29, 108 |
| Conread position: | 82-304 |
| Cow position: | chr19:33517517-33517731 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 206, 108 |
| Conread position: | 83-253 |
| Cow position: | chr19:26678467-26678297 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 79, 107 |
| Conread position: | 83-286 |
| Cow position: | chr19:26950683-26950887 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 126, 22 |
| Conread position: | 128-280 |
| Cow position: | chr19:25992085-25992238 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 128-281 |
| Cow position: | chr19:25540470-25540318 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 128-283 |
| Cow position: | chr19:36464783-36464633 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 128-283 |
| Cow position: | chr19:39626358-39626513 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 128-315 |
| Cow position: | chr19:51619216-51619402 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 155, 22 |
| Conread position: | 128-327 |
| Cow position: | chr19:49863838-49863634 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 150, 44 |
| Conread position: | 128-327 |
| Cow position: | chr19:54835885-54835680 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 150, 34 |
| Conread position: | 128-330 |
| Cow position: | chr19:6442970-6443187 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 135-304 |
| Cow position: | chr19:7582487-7582654 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 146, 17 |
| Conread position: | 139-301 |
| Cow position: | chr19:9881446-9881609 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 149, 51 |
| Conread position: | 157-286 |
| Cow position: | chr19:9535764-9535894 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 96, 33 |
| Conread position: | 175-282 |
| Cow position: | chr19:18655859-18655966 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 175-300 |
| Cow position: | chr19:19012997-19012874 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 176-315 |
| Cow position: | chr19:398099-397960 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 7, 118 |
| Conread position: | 179-298 |
| Cow position: | chr19:23039715-23039597 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 105, 114 |
Show alignments to all cow chromosomes.