Cow genome map


           Conread name:
           Ss1.1-rpigcf0_021306.5
        

               Conread position:
               14-188
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               37-274
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               39, 26
               

               Conread position:
               42-197
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               42-202
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               97, 32
               

               Conread position:
               42-208
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               42-224
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               146
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               42-237
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               36, 133
               

               Conread position:
               42-286
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               42-286
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               42-286
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               8, 34
               

               Conread position:
               42-298
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 33
               

               Conread position:
               42-299
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 33
               

               Conread position:
               42-301
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               42-305
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               234, 33
               

               Conread position:
               42-339
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 25
               

               Conread position:
               42-339
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 42
               

               Conread position:
               43-209
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               67, 34
               

               Conread position:
               44-264
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               172
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               196, 9
               

               Conread position:
               54-191
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               62-286
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               201, 12
               

               Conread position:
               68-318
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               220, 90
               

               Conread position:
               75-197
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               75-300
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               26, 89
               

               Conread position:
               86-296
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               169, 103
               

               Conread position:
               91-298
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               167
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               197, 35
               

               Conread position:
               102-286
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               128-276
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               128-276
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               48, 24
               

               Conread position:
               128-281
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               128-304
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               35, 79
               

               Conread position:
               128-315
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               48, 24
               

               Conread position:
               128-323
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               128-327
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               153, 24
               

               Conread position:
               128-330
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               106, 23
               

               Conread position:
               128-330
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               157, 24
               

               Conread position:
               128-359
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               130-281
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               132-337
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               110, 146
               

               Conread position:
               139-282
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               140-276
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               145-286
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               149-334
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               136, 66
               

               Conread position:
               175-281
               

               Cow position:
               
               

               Alignm length:
               107
               

               Alignm identity:
               85
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               176-323
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               108, 117
               

               Conread position:
               205-330
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               91, 0
               
Show alignments to all cow chromosomes.