Cow genome map
| Conread name: | Ss1.1-rpigcf0_021306.5 |
| Conread position: | 42-240 |
| Cow position: | chr20:22402046-22402246 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 178, 33 |
| Conread position: | 42-251 |
| Cow position: | chr20:37345769-37345561 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 160 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 42-294 |
| Cow position: | chr20:17306496-17306752 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 27, 104 |
| Conread position: | 43-330 |
| Cow position: | chr20:35704758-35705047 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 30 |
| Conread position: | 45-253 |
| Cow position: | chr20:39441185-39440986 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 45-323 |
| Cow position: | chr20:34958583-34958858 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 211 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 72, 23 |
| Conread position: | 59-253 |
| Cow position: | chr20:31050795-31050604 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 18, 71 |
| Conread position: | 73-197 |
| Cow position: | chr20:19620738-19620862 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 35, 117 |
| Conread position: | 76-299 |
| Cow position: | chr20:19466556-19466783 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 71, 101 |
| Conread position: | 128-276 |
| Cow position: | chr20:22034794-22034940 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 128-286 |
| Cow position: | chr20:35609926-35610084 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 128-287 |
| Cow position: | chr20:29588406-29588252 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 128-289 |
| Cow position: | chr20:41972165-41972325 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 128-300 |
| Cow position: | chr20:40157502-40157337 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 128-304 |
| Cow position: | chr20:33201908-33202083 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 128-330 |
| Cow position: | chr20:31189528-31189314 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 144, 191 |
| Conread position: | 128-330 |
| Cow position: | chr20:33895168-33895372 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 169, 24 |
| Conread position: | 128-344 |
| Cow position: | chr20:17918906-17918682 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 150, 48 |
| Conread position: | 132-330 |
| Cow position: | chr20:5826292-5826097 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 146, 107 |
| Conread position: | 140-330 |
| Cow position: | chr20:12546197-12546398 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 146-281 |
| Cow position: | chr20:5897128-5896993 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 175-282 |
| Cow position: | chr20:34296332-34296439 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 182-281 |
| Cow position: | chr20:6905735-6905636 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 82 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.