Cow genome map

Conread name: Ss1.1-rpigcf0_021306.5

Conread position: 42-208
Cow position: chr21:6134831-6134669 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 42-209
Cow position: chr21:7074354-7074188 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 75, 33

Conread position: 42-272
Cow position: chr21:13391351-13391568 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 173
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 33, 0

Conread position: 42-287
Cow position: chr21:1598067-1597827 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 186
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 207, 33

Conread position: 42-304
Cow position: chr21:24428952-24429214 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 33

Conread position: 43-286
Cow position: chr21:26575886-26576124 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 47-169
Cow position: chr21:4510245-4510124 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 47-304
Cow position: chr21:2988545-2988292 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 28

Conread position: 59-191
Cow position: chr21:42475402-42475274 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 59-359
Cow position: chr21:2523383-2523684 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 16

Conread position: 75-236
Cow position: chr21:22513144-22512987 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 116
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 75-299
Cow position: chr21:3789992-3789760 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 180
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 195, 0

Conread position: 101-286
Cow position: chr21:2854688-2854495 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 150
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 140, 15

Conread position: 128-272
Cow position: chr21:41506086-41505943 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 128-275
Cow position: chr21:9293454-9293307 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 48, 39

Conread position: 128-279
Cow position: chr21:36641103-36641254 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 117, 31

Conread position: 128-281
Cow position: chr21:39277481-39277630 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 128-282
Cow position: chr21:8913265-8913112 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 35, 0

Conread position: 128-290
Cow position: chr21:8907088-8906925 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 156, 0

Conread position: 128-297
Cow position: chr21:11734935-11734764 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 141, 157

Conread position: 128-297
Cow position: chr21:15642353-15642516 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 128-297
Cow position: chr21:41442953-41443115 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 128-304
Cow position: chr21:9975429-9975257 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 155, 30

Conread position: 128-304
Cow position: chr21:41838288-41838464 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 128-315
Cow position: chr21:10838401-10838215 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 184, 0

Conread position: 128-330
Cow position: chr21:30090562-30090351 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 161
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 112, 176

Conread position: 132-281
Cow position: chr21:39251178-39251325 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 37, 30

Conread position: 132-282
Cow position: chr21:39736414-39736564 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 132-304
Cow position: chr21:22054619-22054441 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 135-304
Cow position: chr21:21565097-21565262 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 140-281
Cow position: chr21:14780263-14780404 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 117
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 113, 122

Conread position: 140-281
Cow position: chr21:32432514-32432655 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 142-298
Cow position: chr21:7125665-7125510 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 142, 21

Conread position: 160-304
Cow position: chr21:3763214-3763071 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 122, 0

Show alignments to all cow chromosomes.