Cow genome map
| Conread name: | Ss1.1-rpigcf0_021306.5 |
| Conread position: | 42-185 |
| Cow position: | chr22:28532653-28532795 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 42-254 |
| Cow position: | chr22:4617505-4617287 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 27, 152 |
| Conread position: | 42-254 |
| Cow position: | chr22:5350761-5350545 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 27, 152 |
| Conread position: | 42-304 |
| Cow position: | chr22:10467897-10468153 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 192 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 45-223 |
| Cow position: | chr22:45605089-45604913 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 75-286 |
| Cow position: | chr22:43969430-43969637 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 163 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 76-286 |
| Cow position: | chr22:6555276-6555484 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 99 |
| Conread position: | 84-286 |
| Cow position: | chr22:5459553-5459358 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 44, 84 |
| Conread position: | 84-304 |
| Cow position: | chr22:6193482-6193266 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 87, 113 |
| Conread position: | 125-286 |
| Cow position: | chr22:14796575-14796736 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 128-269 |
| Cow position: | chr22:4016938-4016793 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 128-272 |
| Cow position: | chr22:10695113-10695252 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 128-274 |
| Cow position: | chr22:24773542-24773688 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 128-287 |
| Cow position: | chr22:23235077-23235230 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 128-301 |
| Cow position: | chr22:21015047-21015223 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 146, 0 |
| Conread position: | 128-304 |
| Cow position: | chr22:3242169-3241998 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 39, 49 |
| Conread position: | 128-304 |
| Cow position: | chr22:11166031-11165859 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 128-304 |
| Cow position: | chr22:19568597-19568423 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 128-330 |
| Cow position: | chr22:956321-956542 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 128-358 |
| Cow position: | chr22:27429517-27429283 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 157, 108 |
| Conread position: | 132-295 |
| Cow position: | chr22:1916030-1916193 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 31, 45 |
| Conread position: | 139-330 |
| Cow position: | chr22:43025991-43026188 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 140-276 |
| Cow position: | chr22:26429734-26429598 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 142-280 |
| Cow position: | chr22:11169458-11169320 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 145-330 |
| Cow position: | chr22:4013092-4012898 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 129, 18 |
| Conread position: | 152-286 |
| Cow position: | chr22:26040084-26039948 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 98, 0 |
Show alignments to all cow chromosomes.