Cow genome map
| Conread name: | Ss1.1-rpigcf0_021306.5 |
| Conread position: | 41-261 |
| Cow position: | chr28:11095815-11095603 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 172 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 42-194 |
| Cow position: | chr28:18714178-18714324 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 42-282 |
| Cow position: | chr28:4564026-4564242 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 42-327 |
| Cow position: | chr28:34697277-34697558 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 213 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 236, 33 |
| Conread position: | 85-318 |
| Cow position: | chr28:11209552-11209787 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 41, 106 |
| Conread position: | 102-336 |
| Cow position: | chr28:5709441-5709675 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 181 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 182, 14 |
| Conread position: | 128-257 |
| Cow position: | chr28:462780-462652 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 128-276 |
| Cow position: | chr28:28417854-28417708 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 128-281 |
| Cow position: | chr28:28556182-28556335 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 128-296 |
| Cow position: | chr28:33322073-33321909 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 156, 30 |
| Conread position: | 128-297 |
| Cow position: | chr28:28602372-28602209 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 128-304 |
| Cow position: | chr28:12078595-12078424 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 155, 24 |
| Conread position: | 128-304 |
| Cow position: | chr28:30613192-30613021 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 48, 24 |
| Conread position: | 128-306 |
| Cow position: | chr28:11772351-11772529 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 153, 166 |
| Conread position: | 128-330 |
| Cow position: | chr28:26290792-26290580 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 70, 24 |
| Conread position: | 131-287 |
| Cow position: | chr28:30418344-30418490 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 132-330 |
| Cow position: | chr28:26861083-26861285 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 135, 20 |
| Conread position: | 146-290 |
| Cow position: | chr28:13646419-13646276 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 146-304 |
| Cow position: | chr28:30048158-30048318 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 90, 0 |
Show alignments to all cow chromosomes.