Cow genome map


           Conread name:
           Ss1.1-rpigcf0_021306.5
        

               Conread position:
               42-194
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               97, 33
               

               Conread position:
               42-194
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               42-201
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               42-254
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               42-272
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 33
               

               Conread position:
               42-282
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               42-282
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               42-286
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               42-286
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               187
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               137, 33
               

               Conread position:
               42-299
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               46, 33
               

               Conread position:
               42-304
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               236, 31
               

               Conread position:
               42-304
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               189, 33
               

               Conread position:
               42-306
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               45-261
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               45-286
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               185
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               218, 28
               

               Conread position:
               47-286
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               53-286
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               59-298
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               229, 16
               

               Conread position:
               60-327
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               88, 15
               

               Conread position:
               62-228
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               77-252
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               125-304
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               156, 65
               

               Conread position:
               128-272
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               128-282
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               128-287
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               128-287
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               128-295
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               128-304
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               51, 27
               

               Conread position:
               128-304
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               160, 23
               

               Conread position:
               128-306
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               173, 22
               

               Conread position:
               128-318
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               150, 24
               

               Conread position:
               128-329
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               125, 24
               

               Conread position:
               128-330
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               148, 39
               

               Conread position:
               128-333
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               146, 90
               

               Conread position:
               128-342
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               69, 109
               

               Conread position:
               129-304
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               155, 164
               

               Conread position:
               132-282
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               141-286
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               142-304
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               180-286
               

               Cow position:
               
               

               Alignm length:
               107
               

               Alignm identity:
               88
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               85, 0
               
Show alignments to all cow chromosomes.