Cow genome map

Conread name: Ss1.1-rpigcf0_021306.5

Conread position: 42-191
Cow position: chr9:36425915-36426063 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 42-200
Cow position: chr9:56082844-56082686 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 95, 33

Conread position: 42-286
Cow position: chr9:21900135-21900364 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 189
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 33, 0

Conread position: 42-317
Cow position: chr9:30111099-30111370 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 201
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 72, 33

Conread position: 42-330
Cow position: chr9:61312593-61312894 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 33

Conread position: 42-349
Cow position: chr9:1020642-1020953 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 219
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 223, 34

Conread position: 45-176
Cow position: chr9:26525550-26525680 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 46-276
Cow position: chr9:53332591-53332817 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 177
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 127, 29

Conread position: 50-286
Cow position: chr9:61445912-61445679 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 175
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 25, 0

Conread position: 52-315
Cow position: chr9:48070377-48070125 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 183
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 236, 45

Conread position: 65-304
Cow position: chr9:7056757-7056995 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 179
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 223, 124

Conread position: 83-304
Cow position: chr9:6269327-6269546 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 168
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 205, 72

Conread position: 84-301
Cow position: chr9:31545096-31544880 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 204, 105

Conread position: 84-324
Cow position: chr9:21103204-21103447 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 173
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 192, 104

Conread position: 85-350
Cow position: chr9:10889193-10888926 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 200
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 134, 27

Conread position: 93-304
Cow position: chr9:43834124-43833916 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 83, 98

Conread position: 116-316
Cow position: chr9:52009703-52009898 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 11, 35

Conread position: 117-281
Cow position: chr9:50464851-50464690 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 10, 38

Conread position: 128-281
Cow position: chr9:44323380-44323528 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 128-282
Cow position: chr9:35837031-35837185 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 70, 34

Conread position: 128-304
Cow position: chr9:5064340-5064513 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 148, 30

Conread position: 128-304
Cow position: chr9:27372884-27372710 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 46, 51

Conread position: 128-304
Cow position: chr9:38864170-38864341 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 128-304
Cow position: chr9:41902662-41902483 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 35, 169

Conread position: 128-304
Cow position: chr9:50684161-50683985 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 19, 155

Conread position: 128-323
Cow position: chr9:21653047-21652856 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 156, 24

Conread position: 128-330
Cow position: chr9:26700528-26700747 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 34

Conread position: 128-331
Cow position: chr9:35183489-35183282 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 153, 0

Conread position: 132-304
Cow position: chr9:11425220-11425390 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 152, 66

Conread position: 135-287
Cow position: chr9:48518557-48518707 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 131, 0

Conread position: 140-281
Cow position: chr9:45229317-45229453 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 140-304
Cow position: chr9:35191725-35191561 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 141, 153

Conread position: 140-330
Cow position: chr9:26734940-26734745 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 110, 14

Conread position: 156-315
Cow position: chr9:11359347-11359190 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 128, 34

Conread position: 175-296
Cow position: chr9:4961566-4961444 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 102, 0

Conread position: 175-329
Cow position: chr9:45947133-45947298 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 97, 0

Conread position: 179-304
Cow position: chr9:6856697-6856572 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 96, 57

Show alignments to all cow chromosomes.