Cow genome map
| Conread name: | Ss1.1-rpigcf0_021306.5 |
| Conread position: | 42-187 |
| Cow position: | chrX:33159213-33159071 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 42-265 |
| Cow position: | chrX:22436890-22437111 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 42-286 |
| Cow position: | chrX:28859132-28858889 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 42-286 |
| Cow position: | chrX:44745006-44745253 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 46, 27 |
| Conread position: | 42-304 |
| Cow position: | chrX:29035877-29036140 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 33 |
| Conread position: | 45-182 |
| Cow position: | chrX:1742778-1742913 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 45-209 |
| Cow position: | chrX:40316015-40315854 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 45-286 |
| Cow position: | chrX:46813270-46813512 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 62 |
| Conread position: | 46-224 |
| Cow position: | chrX:45570008-45569836 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 55-201 |
| Cow position: | chrX:16893743-16893600 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 107, 20 |
| Conread position: | 64-286 |
| Cow position: | chrX:30026605-30026818 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 84-290 |
| Cow position: | chrX:32751680-32751878 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 74, 87 |
| Conread position: | 84-304 |
| Cow position: | chrX:28847621-28847842 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 72, 106 |
| Conread position: | 116-300 |
| Cow position: | chrX:26246406-26246226 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 161, 36 |
| Conread position: | 128-256 |
| Cow position: | chrX:47119550-47119677 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 128-281 |
| Cow position: | chrX:7544814-7544663 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 128-281 |
| Cow position: | chrX:39205645-39205793 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 128-309 |
| Cow position: | chrX:32018660-32018836 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 155, 22 |
| Conread position: | 128-343 |
| Cow position: | chrX:39732056-39731848 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 177, 24 |
| Conread position: | 132-286 |
| Cow position: | chrX:47296674-47296827 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 65, 20 |
| Conread position: | 140-275 |
| Cow position: | chrX:41387552-41387417 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 140-330 |
| Cow position: | chrX:15327825-15328022 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 179-281 |
| Cow position: | chrX:25200841-25200943 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 83 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 179-344 |
| Cow position: | chrX:25190795-25190623 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 56, 0 |
Show alignments to all cow chromosomes.