Cow genome map


           Conread name:
           Ss1.1-rpigcf0_021539.5
        

               Conread position:
               319-457
               

               Cow position:
               chr1:79450275-79450145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               320-471
               

               Cow position:
               chr1:101094046-101094199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               125, 52
               

               Conread position:
               320-483
               

               Cow position:
               chr1:19791512-19791346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               128, 26
               

               Conread position:
               322-467
               

               Cow position:
               chr1:19785703-19785844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               325-473
               

               Cow position:
               chr1:79692745-79692595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               326-457
               

               Cow position:
               chr1:60871116-60871249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               327-446
               

               Cow position:
               chr1:26169087-26169206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.