Cow genome map

Conread name: Ss1.1-rpigcf0_021549.5

Conread position: 285-427
Cow position:
Alignm length: 145
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 25, 5

Conread position: 287-466
Cow position:
Alignm length: 182
Alignm identity: 129
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 20, 39

Conread position: 294-419
Cow position:
Alignm length: 128
Alignm identity: 105
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 294-422
Cow position:
Alignm length: 131
Alignm identity: 102
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 294-427
Cow position:
Alignm length: 137
Alignm identity: 106
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 294-467
Cow position:
Alignm length: 176
Alignm identity: 132
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 22, 131

Conread position: 294-468
Cow position:
Alignm length: 175
Alignm identity: 131
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 27, 0

Conread position: 295-414
Cow position:
Alignm length: 122
Alignm identity: 102
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 17, 0

Conread position: 295-415
Cow position:
Alignm length: 123
Alignm identity: 98
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 18, 96

Conread position: 295-415
Cow position:
Alignm length: 123
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 295-415
Cow position:
Alignm length: 123
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 21, 72

Conread position: 295-416
Cow position:
Alignm length: 124
Alignm identity: 99
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 295-416
Cow position:
Alignm length: 124
Alignm identity: 99
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 295-416
Cow position:
Alignm length: 124
Alignm identity: 99
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 295-416
Cow position:
Alignm length: 124
Alignm identity: 98
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 295-416
Cow position:
Alignm length: 124
Alignm identity: 101
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 295-416
Cow position:
Alignm length: 124
Alignm identity: 95
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 295-418
Cow position:
Alignm length: 126
Alignm identity: 103
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 19, 121

Conread position: 295-419
Cow position:
Alignm length: 127
Alignm identity: 99
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 295-419
Cow position:
Alignm length: 127
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 295-419
Cow position:
Alignm length: 127
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 295-419
Cow position:
Alignm length: 125
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 295-422
Cow position:
Alignm length: 128
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 295-422
Cow position:
Alignm length: 130
Alignm identity: 108
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 21, 101

Conread position: 295-423
Cow position:
Alignm length: 130
Alignm identity: 99
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 120, 91

Conread position: 295-423
Cow position:
Alignm length: 131
Alignm identity: 102
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 295-423
Cow position:
Alignm length: 131
Alignm identity: 102
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 295-424
Cow position:
Alignm length: 133
Alignm identity: 104
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 295-424
Cow position:
Alignm length: 132
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 24, 39

Conread position: 295-424
Cow position:
Alignm length: 132
Alignm identity: 108
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 24, 0

Conread position: 295-424
Cow position:
Alignm length: 133
Alignm identity: 104
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 295-426
Cow position:
Alignm length: 134
Alignm identity: 107
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 17, 48

Conread position: 295-426
Cow position:
Alignm length: 134
Alignm identity: 103
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 295-426
Cow position:
Alignm length: 134
Alignm identity: 103
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 295-427
Cow position:
Alignm length: 135
Alignm identity: 107
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 19, 0

Conread position: 295-427
Cow position:
Alignm length: 136
Alignm identity: 102
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 295-427
Cow position:
Alignm length: 135
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 295-430
Cow position:
Alignm length: 138
Alignm identity: 112
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 19, 0

Conread position: 295-430
Cow position:
Alignm length: 140
Alignm identity: 108
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 295-430
Cow position:
Alignm length: 139
Alignm identity: 106
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 16, 111

Conread position: 295-430
Cow position:
Alignm length: 139
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 16, 111

Conread position: 295-431
Cow position:
Alignm length: 140
Alignm identity: 105
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 24, 126

Conread position: 295-432
Cow position:
Alignm length: 142
Alignm identity: 108
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 295-432
Cow position:
Alignm length: 140
Alignm identity: 115
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 23, 51

Conread position: 295-432
Cow position:
Alignm length: 140
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 106

Conread position: 295-432
Cow position:
Alignm length: 140
Alignm identity: 104
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 295-433
Cow position:
Alignm length: 141
Alignm identity: 106
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 295-433
Cow position:
Alignm length: 141
Alignm identity: 110
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 21, 0

Conread position: 295-433
Cow position:
Alignm length: 142
Alignm identity: 109
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 295-436
Cow position:
Alignm length: 145
Alignm identity: 119
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 23, 47

Conread position: 295-436
Cow position:
Alignm length: 144
Alignm identity: 118
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 19, 0

Conread position: 295-436
Cow position:
Alignm length: 144
Alignm identity: 116
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 23, 0

Conread position: 295-436
Cow position:
Alignm length: 147
Alignm identity: 115
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 19, 71

Conread position: 295-438
Cow position:
Alignm length: 146
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 54

Conread position: 295-438
Cow position:
Alignm length: 150
Alignm identity: 118
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 20, 0

Conread position: 295-438
Cow position:
Alignm length: 146
Alignm identity: 113
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 295-438
Cow position:
Alignm length: 146
Alignm identity: 113
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 19, 0

Conread position: 295-438
Cow position:
Alignm length: 145
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 295-438
Cow position:
Alignm length: 146
Alignm identity: 109
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 21, 54

Conread position: 295-438
Cow position:
Alignm length: 147
Alignm identity: 110
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 295-440
Cow position:
Alignm length: 148
Alignm identity: 111
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 295-441
Cow position:
Alignm length: 149
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 295-441
Cow position:
Alignm length: 148
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 126, 42

Conread position: 295-442
Cow position:
Alignm length: 150
Alignm identity: 123
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 24, 146

Conread position: 295-442
Cow position:
Alignm length: 152
Alignm identity: 118
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 19, 111

Conread position: 295-442
Cow position:
Alignm length: 151
Alignm identity: 119
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 24, 43

Conread position: 295-443
Cow position:
Alignm length: 151
Alignm identity: 119
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 19, 101

Conread position: 295-443
Cow position:
Alignm length: 151
Alignm identity: 119
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 23, 0

Conread position: 295-443
Cow position:
Alignm length: 151
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 19, 61

Conread position: 295-443
Cow position:
Alignm length: 152
Alignm identity: 116
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 78, 43

Conread position: 295-444
Cow position:
Alignm length: 152
Alignm identity: 119
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 16, 135

Conread position: 295-444
Cow position:
Alignm length: 151
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 14, 38

Conread position: 295-445
Cow position:
Alignm length: 153
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 19, 125

Conread position: 295-445
Cow position:
Alignm length: 153
Alignm identity: 113
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 23, 56

Conread position: 295-453
Cow position:
Alignm length: 166
Alignm identity: 121
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 295-456
Cow position:
Alignm length: 162
Alignm identity: 127
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 17, 0

Conread position: 295-458
Cow position:
Alignm length: 166
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 147

Conread position: 295-461
Cow position:
Alignm length: 169
Alignm identity: 130
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 26, 0

Conread position: 295-462
Cow position:
Alignm length: 171
Alignm identity: 131
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 19, 96

Conread position: 295-462
Cow position:
Alignm length: 170
Alignm identity: 122
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 295-471
Cow position:
Alignm length: 177
Alignm identity: 135
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 295-474
Cow position:
Alignm length: 182
Alignm identity: 129
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 13, 47

Conread position: 295-475
Cow position:
Alignm length: 185
Alignm identity: 131
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 16, 58

Conread position: 295-515
Cow position:
Alignm length: 224
Alignm identity: 159
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 21, 99

Conread position: 295-518
Cow position:
Alignm length: 229
Alignm identity: 158
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 21, 127

Conread position: 295-522
Cow position:
Alignm length: 230
Alignm identity: 165
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 14, 110

Conread position: 295-522
Cow position:
Alignm length: 231
Alignm identity: 172
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 19, 73

Conread position: 296-416
Cow position:
Alignm length: 123
Alignm identity: 101
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 296-423
Cow position:
Alignm length: 130
Alignm identity: 103
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 296-434
Cow position:
Alignm length: 141
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 97

Conread position: 296-440
Cow position:
Alignm length: 147
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 296-443
Cow position:
Alignm length: 153
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 296-493
Cow position:
Alignm length: 200
Alignm identity: 158
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 16, 0

Conread position: 296-522
Cow position:
Alignm length: 237
Alignm identity: 175
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 18, 161

Conread position: 297-423
Cow position:
Alignm length: 129
Alignm identity: 101
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 297-438
Cow position:
Alignm length: 144
Alignm identity: 109
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 21, 37

Conread position: 297-443
Cow position:
Alignm length: 149
Alignm identity: 113
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 22, 125

Conread position: 297-462
Cow position:
Alignm length: 169
Alignm identity: 122
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 297-499
Cow position:
Alignm length: 211
Alignm identity: 152
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 11, 37

Conread position: 298-426
Cow position:
Alignm length: 133
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 298-499
Cow position:
Alignm length: 206
Alignm identity: 157
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 16, 36

Conread position: 299-419
Cow position:
Alignm length: 126
Alignm identity: 101
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 299-424
Cow position:
Alignm length: 128
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 299-424
Cow position:
Alignm length: 128
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 299-427
Cow position:
Alignm length: 131
Alignm identity: 103
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 299-427
Cow position:
Alignm length: 131
Alignm identity: 102
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 13, 67

Conread position: 299-438
Cow position:
Alignm length: 142
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 299-447
Cow position:
Alignm length: 152
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 299-483
Cow position:
Alignm length: 192
Alignm identity: 135
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 20, 171

Conread position: 299-523
Cow position:
Alignm length: 234
Alignm identity: 167
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 9, 43

Conread position: 300-423
Cow position:
Alignm length: 126
Alignm identity: 100
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 300-432
Cow position:
Alignm length: 135
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 304-459
Cow position:
Alignm length: 156
Alignm identity: 121
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 305-436
Cow position:
Alignm length: 134
Alignm identity: 103
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 110, 0

Conread position: 312-438
Cow position:
Alignm length: 128
Alignm identity: 101
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 103, 0

Conread position: 312-442
Cow position:
Alignm length: 131
Alignm identity: 104
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 315-430
Cow position:
Alignm length: 116
Alignm identity: 97
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 103, 0

Conread position: 315-430
Cow position:
Alignm length: 116
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 315-445
Cow position:
Alignm length: 131
Alignm identity: 104
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 315-445
Cow position:
Alignm length: 131
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 315-493
Cow position:
Alignm length: 180
Alignm identity: 134
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 134, 159

Conread position: 316-427
Cow position:
Alignm length: 112
Alignm identity: 91
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 316-442
Cow position:
Alignm length: 128
Alignm identity: 102
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 26, 0

Conread position: 316-445
Cow position:
Alignm length: 130
Alignm identity: 99
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 316-540
Cow position:
Alignm length: 225
Alignm identity: 163
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 99, 0

Conread position: 317-478
Cow position:
Alignm length: 162
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 320-419
Cow position:
Alignm length: 100
Alignm identity: 83
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 320-447
Cow position:
Alignm length: 128
Alignm identity: 98
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 321-427
Cow position:
Alignm length: 108
Alignm identity: 89
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 7, 88

Conread position: 321-444
Cow position:
Alignm length: 126
Alignm identity: 100
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 325-467
Cow position:
Alignm length: 144
Alignm identity: 108
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 124, 89

Conread position: 325-474
Cow position:
Alignm length: 150
Alignm identity: 110
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 328-491
Cow position:
Alignm length: 169
Alignm identity: 132
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 110, 0

Conread position: 333-427
Cow position:
Alignm length: 95
Alignm identity: 80
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 336-459
Cow position:
Alignm length: 124
Alignm identity: 100
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 110, 0

Conread position: 351-524
Cow position:
Alignm length: 174
Alignm identity: 133
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 57, 0

Show alignments to all cow chromosomes.