Cow genome map
| Conread name: | Ss1.1-rpigcf0_021549.5 |
| Conread position: | 292-435 |
| Cow position: | chr21:23568273-23568422 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 294-427 |
| Cow position: | chr21:38720301-38720433 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 24, 74 |
| Conread position: | 294-438 |
| Cow position: | chr21:2537088-2536942 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 294-507 |
| Cow position: | chr21:26567726-26567514 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 25, 135 |
| Conread position: | 294-522 |
| Cow position: | chr21:12200152-12200377 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 16, 136 |
| Conread position: | 295-409 |
| Cow position: | chr21:13585007-13584893 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 90 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 295-416 |
| Cow position: | chr21:471728-471849 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 24, 72 |
| Conread position: | 295-416 |
| Cow position: | chr21:7377874-7377751 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 295-416 |
| Cow position: | chr21:36763113-36763236 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 295-416 |
| Cow position: | chr21:42562684-42562802 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 19, 13 |
| Conread position: | 295-419 |
| Cow position: | chr21:15584367-15584241 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 295-422 |
| Cow position: | chr21:10001127-10001256 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 21, 51 |
| Conread position: | 295-422 |
| Cow position: | chr21:28244523-28244651 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 295-422 |
| Cow position: | chr21:37928701-37928830 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 295-423 |
| Cow position: | chr21:395920-396049 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 24, 40 |
| Conread position: | 295-423 |
| Cow position: | chr21:7583902-7584032 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 295-423 |
| Cow position: | chr21:20160728-20160858 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 295-423 |
| Cow position: | chr21:25344913-25345043 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 295-423 |
| Cow position: | chr21:32339688-32339558 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 295-423 |
| Cow position: | chr21:41040996-41041125 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 18, 118 |
| Conread position: | 295-424 |
| Cow position: | chr21:6051555-6051686 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 295-424 |
| Cow position: | chr21:29978708-29978577 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 295-424 |
| Cow position: | chr21:42144878-42145005 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 295-424 |
| Cow position: | chr21:43259271-43259402 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 19, 94 |
| Conread position: | 295-426 |
| Cow position: | chr21:19868903-19868770 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 295-426 |
| Cow position: | chr21:41610219-41610355 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 295-427 |
| Cow position: | chr21:938073-938207 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 295-427 |
| Cow position: | chr21:10673173-10673307 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 24, 81 |
| Conread position: | 295-427 |
| Cow position: | chr21:15976685-15976818 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 19, 73 |
| Conread position: | 295-427 |
| Cow position: | chr21:30980525-30980392 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 23, 53 |
| Conread position: | 295-427 |
| Cow position: | chr21:36508290-36508420 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 23, 39 |
| Conread position: | 295-427 |
| Cow position: | chr21:36909983-36910117 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 295-428 |
| Cow position: | chr21:40291694-40291561 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 17, 35 |
| Conread position: | 295-430 |
| Cow position: | chr21:868872-868734 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 295-430 |
| Cow position: | chr21:14452286-14452425 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 295-431 |
| Cow position: | chr21:5426992-5427128 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 24, 97 |
| Conread position: | 295-432 |
| Cow position: | chr21:40266177-40266312 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 295-432 |
| Cow position: | chr21:41597863-41598002 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 295-434 |
| Cow position: | chr21:3360961-3360822 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 59, 13 |
| Conread position: | 295-436 |
| Cow position: | chr21:17890354-17890497 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 295-436 |
| Cow position: | chr21:27677534-27677677 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 295-438 |
| Cow position: | chr21:8431048-8430903 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 295-438 |
| Cow position: | chr21:10004833-10004689 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 21, 58 |
| Conread position: | 295-438 |
| Cow position: | chr21:10264085-10264229 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 16, 100 |
| Conread position: | 295-438 |
| Cow position: | chr21:10410276-10410419 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 24, 55 |
| Conread position: | 295-438 |
| Cow position: | chr21:37706363-37706216 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 295-438 |
| Cow position: | chr21:39319358-39319213 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 295-439 |
| Cow position: | chr21:31159454-31159595 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 295-440 |
| Cow position: | chr21:9334540-9334687 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 18, 55 |
| Conread position: | 295-442 |
| Cow position: | chr21:712994-713144 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 295-442 |
| Cow position: | chr21:3400781-3400631 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 11, 58 |
| Conread position: | 295-442 |
| Cow position: | chr21:13365395-13365543 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 13, 39 |
| Conread position: | 295-443 |
| Cow position: | chr21:41621177-41621325 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 18, 128 |
| Conread position: | 295-444 |
| Cow position: | chr21:17519073-17519224 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 295-444 |
| Cow position: | chr21:42841545-42841394 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 295-444 |
| Cow position: | chr21:45473706-45473554 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 295-445 |
| Cow position: | chr21:18779919-18779768 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 128, 20 |
| Conread position: | 295-445 |
| Cow position: | chr21:20213725-20213574 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 22, 121 |
| Conread position: | 295-445 |
| Cow position: | chr21:24266513-24266364 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 18, 9 |
| Conread position: | 295-445 |
| Cow position: | chr21:28237654-28237504 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 24, 60 |
| Conread position: | 295-448 |
| Cow position: | chr21:7221288-7221130 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 18, 119 |
| Conread position: | 295-448 |
| Cow position: | chr21:38900826-38900982 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 19, 72 |
| Conread position: | 295-457 |
| Cow position: | chr21:13163911-13164073 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 19, 73 |
| Conread position: | 295-457 |
| Cow position: | chr21:26244966-26245126 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 13, 136 |
| Conread position: | 295-458 |
| Cow position: | chr21:8978501-8978667 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 17, 40 |
| Conread position: | 295-459 |
| Cow position: | chr21:24642573-24642728 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 19, 56 |
| Conread position: | 295-459 |
| Cow position: | chr21:36795655-36795821 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 295-461 |
| Cow position: | chr21:30835418-30835584 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 151, 26 |
| Conread position: | 295-462 |
| Cow position: | chr21:8545966-8545801 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 120, 26 |
| Conread position: | 295-462 |
| Cow position: | chr21:11057826-11057660 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 295-466 |
| Cow position: | chr21:46470238-46470408 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 24, 47 |
| Conread position: | 295-467 |
| Cow position: | chr21:10538203-10538029 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 295-467 |
| Cow position: | chr21:42384560-42384733 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 31, 130 |
| Conread position: | 295-470 |
| Cow position: | chr21:9416302-9416478 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 17, 115 |
| Conread position: | 295-471 |
| Cow position: | chr21:45921006-45920831 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 13, 111 |
| Conread position: | 295-477 |
| Cow position: | chr21:7581853-7581669 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 295-477 |
| Cow position: | chr21:44251791-44251605 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 295-488 |
| Cow position: | chr21:734646-734832 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 295-492 |
| Cow position: | chr21:2657861-2658062 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 295-494 |
| Cow position: | chr21:19360124-19359926 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 40, 167 |
| Conread position: | 295-496 |
| Cow position: | chr21:7088652-7088857 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 30, 24 |
| Conread position: | 295-521 |
| Cow position: | chr21:30119746-30119974 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 295-521 |
| Cow position: | chr21:39401647-39401868 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 164, 20 |
| Conread position: | 295-522 |
| Cow position: | chr21:2927140-2926914 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 146, 9 |
| Conread position: | 295-524 |
| Cow position: | chr21:33563060-33563286 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 18, 39 |
| Conread position: | 295-540 |
| Cow position: | chr21:17265949-17265709 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 18, 112 |
| Conread position: | 296-422 |
| Cow position: | chr21:8687090-8686962 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 296-422 |
| Cow position: | chr21:13225768-13225896 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 296-423 |
| Cow position: | chr21:5153674-5153802 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 17, 114 |
| Conread position: | 296-428 |
| Cow position: | chr21:37838013-37837879 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 296-444 |
| Cow position: | chr21:29069274-29069125 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 22, 135 |
| Conread position: | 296-445 |
| Cow position: | chr21:19148163-19148313 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 17, 97 |
| Conread position: | 296-455 |
| Cow position: | chr21:33772-33930 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 22, 127 |
| Conread position: | 296-462 |
| Cow position: | chr21:20153009-20153176 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 18, 99 |
| Conread position: | 296-466 |
| Cow position: | chr21:42414045-42413875 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 22, 125 |
| Conread position: | 297-424 |
| Cow position: | chr21:7768492-7768621 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 297-434 |
| Cow position: | chr21:28030343-28030481 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 21, 49 |
| Conread position: | 298-415 |
| Cow position: | chr21:7823417-7823538 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 16, 69 |
| Conread position: | 298-419 |
| Cow position: | chr21:42007406-42007284 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 94 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 298-422 |
| Cow position: | chr21:40475554-40475679 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 298-433 |
| Cow position: | chr21:23586937-23587073 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 21, 99 |
| Conread position: | 298-442 |
| Cow position: | chr21:23322023-23321877 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 298-445 |
| Cow position: | chr21:44592154-44592004 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 299-416 |
| Cow position: | chr21:6736133-6736014 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 299-424 |
| Cow position: | chr21:28924165-28924293 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 299-427 |
| Cow position: | chr21:1059135-1059262 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 14, 38 |
| Conread position: | 299-437 |
| Cow position: | chr21:11779480-11779345 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 127, 24 |
| Conread position: | 299-438 |
| Cow position: | chr21:18568583-18568443 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 23, 121 |
| Conread position: | 299-491 |
| Cow position: | chr21:17642928-17642740 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 15, 62 |
| Conread position: | 299-522 |
| Cow position: | chr21:265680-265886 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 22, 79 |
| Conread position: | 300-467 |
| Cow position: | chr21:30157748-30157578 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 302-427 |
| Cow position: | chr21:48482469-48482344 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 11, 31 |
| Conread position: | 302-434 |
| Cow position: | chr21:27521278-27521147 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 305-426 |
| Cow position: | chr21:41737972-41738094 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 307-421 |
| Cow position: | chr21:5214414-5214528 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 307-423 |
| Cow position: | chr21:17183981-17184099 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 307-432 |
| Cow position: | chr21:42189691-42189566 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 97 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 35, 109 |
| Conread position: | 308-415 |
| Cow position: | chr21:19927196-19927093 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 308-415 |
| Cow position: | chr21:27406177-27406070 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 308-441 |
| Cow position: | chr21:46809700-46809566 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 308-457 |
| Cow position: | chr21:42131288-42131137 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 308-462 |
| Cow position: | chr21:9346489-9346645 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 308-523 |
| Cow position: | chr21:28824159-28823944 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 38, 93 |
| Conread position: | 309-438 |
| Cow position: | chr21:42017535-42017406 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 310-436 |
| Cow position: | chr21:29418641-29418763 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 310-491 |
| Cow position: | chr21:5137139-5136955 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 19, 111 |
| Conread position: | 312-427 |
| Cow position: | chr21:13043949-13043834 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 102, 23 |
| Conread position: | 312-427 |
| Cow position: | chr21:37345030-37344915 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 312-430 |
| Cow position: | chr21:17193680-17193560 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 312-435 |
| Cow position: | chr21:43265324-43265201 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 97, 107 |
| Conread position: | 312-491 |
| Cow position: | chr21:10633566-10633391 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 315-423 |
| Cow position: | chr21:26658908-26658800 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 87 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 315-445 |
| Cow position: | chr21:12739154-12739285 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 99, 72 |
| Conread position: | 316-427 |
| Cow position: | chr21:21479226-21479116 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 93 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 99, 73 |
| Conread position: | 317-445 |
| Cow position: | chr21:5405892-5406020 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 320-410 |
| Cow position: | chr21:35647749-35647659 (view UCSC Genome Browser custom track) |
| Alignm length: | 91 |
| Alignm identity: | 83 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 320-423 |
| Cow position: | chr21:11353139-11353242 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 84 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 320-423 |
| Cow position: | chr21:41050968-41051070 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 320-427 |
| Cow position: | chr21:37361163-37361054 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 320-434 |
| Cow position: | chr21:30970014-30970130 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 321-423 |
| Cow position: | chr21:25159251-25159353 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 85 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 321-429 |
| Cow position: | chr21:41994970-41994862 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 86 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 321-445 |
| Cow position: | chr21:27744105-27744226 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 322-458 |
| Cow position: | chr21:40305024-40305160 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 92, 117 |
| Conread position: | 323-415 |
| Cow position: | chr21:43642619-43642712 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 80 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 323-522 |
| Cow position: | chr21:5130286-5130088 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 327-423 |
| Cow position: | chr21:7424928-7424832 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 80 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 335-436 |
| Cow position: | chr21:6291840-6291943 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 85 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 349-491 |
| Cow position: | chr21:40573951-40573806 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 355-540 |
| Cow position: | chr21:19927500-19927684 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 169, 14 |
Show alignments to all cow chromosomes.