Cow genome map

Conread name: Ss1.1-rpigcf0_021549.5

Conread position: 289-475
Cow position: chr22:17294958-17294770 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 8, 132

Conread position: 294-423
Cow position: chr22:26417267-26417398 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 294-459
Cow position: chr22:27328908-27328741 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 133
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 72, 0

Conread position: 295-406
Cow position: chr22:34398471-34398358 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 295-407
Cow position: chr22:29344864-29344977 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 295-408
Cow position: chr22:18293778-18293665 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 295-410
Cow position: chr22:11352467-11352350 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 295-410
Cow position: chr22:29842719-29842602 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 295-412
Cow position: chr22:16724702-16724583 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 295-415
Cow position: chr22:4156832-4156710 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 295-416
Cow position: chr22:7164947-7165071 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 295-416
Cow position: chr22:10752557-10752434 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 295-416
Cow position: chr22:11344495-11344616 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 26, 108

Conread position: 295-416
Cow position: chr22:11767065-11766942 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 295-416
Cow position: chr22:15025125-15025002 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 295-416
Cow position: chr22:20846839-20846964 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 295-417
Cow position: chr22:30643149-30643024 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 295-419
Cow position: chr22:5712573-5712697 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 295-419
Cow position: chr22:12749916-12749790 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 295-419
Cow position: chr22:44180578-44180704 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 295-420
Cow position: chr22:37030532-37030405 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 97
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 295-422
Cow position: chr22:2627561-2627694 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 295-422
Cow position: chr22:16845419-16845290 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 295-422
Cow position: chr22:34712711-34712839 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 19, 101

Conread position: 295-423
Cow position: chr22:1279400-1279270 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 295-423
Cow position: chr22:3301354-3301224 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 295-423
Cow position: chr22:7832369-7832240 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 109
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 27, 125

Conread position: 295-423
Cow position: chr22:32661495-32661624 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 18, 73

Conread position: 295-423
Cow position: chr22:43131573-43131443 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 295-425
Cow position: chr22:6097032-6096900 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 295-426
Cow position: chr22:28665268-28665401 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 24, 0

Conread position: 295-427
Cow position: chr22:877500-877634 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 295-427
Cow position: chr22:1911650-1911785 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 295-427
Cow position: chr22:4075902-4075767 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 23, 0

Conread position: 295-427
Cow position: chr22:9171393-9171527 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 295-427
Cow position: chr22:10553700-10553566 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 113
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 19, 0

Conread position: 295-427
Cow position: chr22:12968084-12967951 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 23, 125

Conread position: 295-427
Cow position: chr22:20626822-20626957 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 295-427
Cow position: chr22:27740877-27741009 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 295-428
Cow position: chr22:12678437-12678302 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 19, 0

Conread position: 295-432
Cow position: chr22:1106052-1106191 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 103
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 295-432
Cow position: chr22:4657058-4656919 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 295-432
Cow position: chr22:18926341-18926480 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 295-432
Cow position: chr22:23372879-23372740 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 24, 115

Conread position: 295-432
Cow position: chr22:23675978-23675844 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 295-434
Cow position: chr22:1326406-1326544 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 103, 0

Conread position: 295-434
Cow position: chr22:1776044-1776188 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 295-434
Cow position: chr22:8090543-8090406 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 16, 44

Conread position: 295-434
Cow position: chr22:8287172-8287309 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 295-434
Cow position: chr22:8412511-8412655 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 17, 0

Conread position: 295-434
Cow position: chr22:9372506-9372647 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 18, 0

Conread position: 295-434
Cow position: chr22:11130855-11130996 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 295-434
Cow position: chr22:33448095-33447951 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 16, 0

Conread position: 295-435
Cow position: chr22:23398419-23398277 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 24, 0

Conread position: 295-436
Cow position: chr22:1849059-1849202 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 295-436
Cow position: chr22:7140629-7140774 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 295-436
Cow position: chr22:12829627-12829481 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 17, 98

Conread position: 295-436
Cow position: chr22:35215533-35215678 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 295-438
Cow position: chr22:12389084-12389229 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 295-438
Cow position: chr22:14487920-14488065 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 107
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 295-438
Cow position: chr22:16541667-16541522 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 295-439
Cow position: chr22:5595824-5595678 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 24, 52

Conread position: 295-441
Cow position: chr22:2643915-2644063 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 129, 0

Conread position: 295-441
Cow position: chr22:32698749-32698893 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 295-442
Cow position: chr22:28058066-28057916 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 295-443
Cow position: chr22:4310386-4310237 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 97, 28

Conread position: 295-443
Cow position: chr22:18967173-18967028 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 295-443
Cow position: chr22:47555836-47555983 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 26, 0

Conread position: 295-444
Cow position: chr22:4017462-4017609 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 23, 47

Conread position: 295-444
Cow position: chr22:10285953-10286108 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 23, 96

Conread position: 295-444
Cow position: chr22:25846337-25846184 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 18, 0

Conread position: 295-445
Cow position: chr22:24032230-24032078 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 21, 0

Conread position: 295-445
Cow position: chr22:27274713-27274563 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 98, 102

Conread position: 295-451
Cow position: chr22:3239897-3240049 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 295-453
Cow position: chr22:16044431-16044269 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 19, 0

Conread position: 295-458
Cow position: chr22:14139972-14140139 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 295-458
Cow position: chr22:22223172-22223336 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 27, 137

Conread position: 295-461
Cow position: chr22:2502811-2502977 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 19, 40

Conread position: 295-461
Cow position: chr22:32514276-32514447 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 17, 155

Conread position: 295-463
Cow position: chr22:9127393-9127564 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 120
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 295-467
Cow position: chr22:18126748-18126573 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 38, 94

Conread position: 295-467
Cow position: chr22:21530375-21530200 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 19, 0

Conread position: 295-471
Cow position: chr22:10533583-10533757 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 137, 38

Conread position: 295-471
Cow position: chr22:37324529-37324702 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 26, 79

Conread position: 295-486
Cow position: chr22:3950237-3950426 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 13, 57

Conread position: 295-487
Cow position: chr22:14690986-14690793 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 13, 133

Conread position: 295-489
Cow position: chr22:27828363-27828555 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 24, 127

Conread position: 295-490
Cow position: chr22:8116103-8115906 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 295-491
Cow position: chr22:6701559-6701373 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 74, 26

Conread position: 295-491
Cow position: chr22:43119744-43119544 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 136
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 295-493
Cow position: chr22:34726652-34726855 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 10, 83

Conread position: 295-495
Cow position: chr22:28672130-28672333 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 23, 159

Conread position: 295-496
Cow position: chr22:6852598-6852399 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 19, 40

Conread position: 295-499
Cow position: chr22:8840590-8840797 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 24, 0

Conread position: 295-499
Cow position: chr22:10303001-10303210 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 146
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 19, 160

Conread position: 295-499
Cow position: chr22:13841125-13841330 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 140
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 31, 180

Conread position: 295-500
Cow position: chr22:31153938-31154147 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 146
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 295-522
Cow position: chr22:23176456-23176237 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 170
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 24, 128

Conread position: 295-539
Cow position: chr22:22155590-22155817 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 183
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 16, 100

Conread position: 295-540
Cow position: chr22:32188869-32188621 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 172
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 17, 218

Conread position: 296-416
Cow position: chr22:47562689-47562813 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 296-419
Cow position: chr22:4736009-4736134 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 296-419
Cow position: chr22:23265666-23265541 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 296-427
Cow position: chr22:14381645-14381778 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 100
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 296-427
Cow position: chr22:14924746-14924613 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 22, 0

Conread position: 296-430
Cow position: chr22:534485-534621 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 22, 0

Conread position: 296-433
Cow position: chr22:41853891-41854032 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 296-439
Cow position: chr22:26803804-26803952 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 296-445
Cow position: chr22:3842606-3842754 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 18, 50

Conread position: 296-445
Cow position: chr22:16621162-16621318 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 296-460
Cow position: chr22:21215704-21215863 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 296-474
Cow position: chr22:4157100-4156915 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 23, 108

Conread position: 296-522
Cow position: chr22:3965172-3965396 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 15, 135

Conread position: 297-427
Cow position: chr22:4535338-4535211 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 297-427
Cow position: chr22:8733351-8733218 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 297-436
Cow position: chr22:18933729-18933584 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 297-459
Cow position: chr22:13878168-13878330 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 119
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 19, 44

Conread position: 298-423
Cow position: chr22:8883003-8883126 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 298-438
Cow position: chr22:3470276-3470419 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 298-438
Cow position: chr22:7361989-7361849 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 16, 70

Conread position: 298-442
Cow position: chr22:6593806-6593667 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 14, 66

Conread position: 298-459
Cow position: chr22:28704172-28704335 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 117
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 299-419
Cow position: chr22:18835919-18835797 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 299-419
Cow position: chr22:23857035-23857157 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 299-423
Cow position: chr22:24611103-24610978 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 107
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 12, 68

Conread position: 299-423
Cow position: chr22:27275451-27275577 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 299-436
Cow position: chr22:10609347-10609484 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 85

Conread position: 299-474
Cow position: chr22:1821596-1821419 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 17, 145

Conread position: 299-476
Cow position: chr22:1710518-1710701 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 128
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 300-422
Cow position: chr22:38977831-38977955 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 301-472
Cow position: chr22:22606216-22606386 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 17, 130

Conread position: 302-416
Cow position: chr22:25943467-25943583 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 98
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 12, 0

Conread position: 302-422
Cow position: chr22:16346388-16346510 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 303-426
Cow position: chr22:644773-644653 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 86, 0

Conread position: 306-400
Cow position: chr22:6106378-6106284 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 79
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 306-439
Cow position: chr22:3909954-3910087 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 100
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 306-521
Cow position: chr22:3997749-3997956 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 162
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 13, 114

Conread position: 307-422
Cow position: chr22:12599370-12599485 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 307-427
Cow position: chr22:44684486-44684604 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 307-432
Cow position: chr22:2409133-2409008 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 308-419
Cow position: chr22:23122002-23121891 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 8

Conread position: 309-444
Cow position: chr22:28120725-28120862 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 113
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 107, 0

Conread position: 310-438
Cow position: chr22:8331000-8331128 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 311-427
Cow position: chr22:1991602-1991719 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 106, 88

Conread position: 311-427
Cow position: chr22:2704301-2704417 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 312-419
Cow position: chr22:39602286-39602393 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 312-424
Cow position: chr22:14178823-14178712 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 106, 0

Conread position: 312-427
Cow position: chr22:12777373-12777258 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 312-432
Cow position: chr22:23630347-23630228 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 93
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 312-445
Cow position: chr22:12188477-12188344 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 312-445
Cow position: chr22:12195564-12195430 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 113, 0

Conread position: 312-445
Cow position: chr22:16339859-16339992 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 312-473
Cow position: chr22:12673331-12673168 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 130, 0

Conread position: 315-416
Cow position: chr22:30687033-30687134 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 83
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 315-419
Cow position: chr22:12313432-12313535 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 315-424
Cow position: chr22:11468382-11468491 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 94
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 315-427
Cow position: chr22:6793867-6793752 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 315-427
Cow position: chr22:44410728-44410840 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 315-473
Cow position: chr22:6655755-6655598 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 51, 109

Conread position: 316-442
Cow position: chr22:749405-749279 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 96
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 316-455
Cow position: chr22:34750683-34750822 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 118, 41

Conread position: 316-457
Cow position: chr22:13222129-13222266 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 316-478
Cow position: chr22:17814241-17814402 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 145, 27

Conread position: 316-494
Cow position: chr22:6326452-6326632 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 124, 0

Conread position: 320-424
Cow position: chr22:15490666-15490770 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 320-442
Cow position: chr22:26316468-26316590 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 320-445
Cow position: chr22:31308896-31309021 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 320-512
Cow position: chr22:31064415-31064605 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 183, 36

Conread position: 320-540
Cow position: chr22:2516895-2516693 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 168
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 204, 114

Conread position: 321-432
Cow position: chr22:27052720-27052609 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 321-436
Cow position: chr22:2876785-2876669 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 108, 0

Conread position: 321-445
Cow position: chr22:16057990-16058111 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 100, 12

Conread position: 322-427
Cow position: chr22:6485976-6486081 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 322-430
Cow position: chr22:1830062-1830170 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 322-445
Cow position: chr22:27591208-27591331 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 323-471
Cow position: chr22:1977762-1977910 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 97

Conread position: 323-486
Cow position: chr22:34606606-34606763 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 323-522
Cow position: chr22:32642696-32642885 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 150
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 40, 0

Conread position: 324-440
Cow position: chr22:48155442-48155558 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 325-438
Cow position: chr22:1728248-1728363 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 96, 0

Conread position: 325-438
Cow position: chr22:25312526-25312639 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 326-427
Cow position: chr22:23397956-23397856 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 88
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 94, 0

Conread position: 326-491
Cow position: chr22:18218895-18218726 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 90, 7

Conread position: 335-485
Cow position: chr22:26659069-26659223 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 80, 0

Conread position: 336-475
Cow position: chr22:531451-531311 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 105
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 103, 0

Show alignments to all cow chromosomes.