Cow genome map


           Conread name:
           Ss1.1-rpldo0107_n16.5
        

               Conread position:
               856-1116
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               903-1102
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               903-1105
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               903-1116
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               165, 152
               

               Conread position:
               903-1116
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               903-1116
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               903-1116
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               156, 145
               

               Conread position:
               903-1116
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               903-1116
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               903-1116
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               75, 80
               

               Conread position:
               903-1116
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               903-1116
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               143, 156
               

               Conread position:
               904-1116
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               904-1116
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               905-1116
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               907-1116
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               907-1116
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               908-1116
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               908-1116
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               6, 134
               

               Conread position:
               908-1116
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               6, 159
               

               Conread position:
               908-1116
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               6, 134
               

               Conread position:
               918-1105
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               918-1105
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               918-1116
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               918-1116
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               918-1116
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               119, 123
               

               Conread position:
               918-1116
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               919-1115
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               30, 38
               

               Conread position:
               919-1116
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               127, 139
               

               Conread position:
               920-1116
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               55, 41
               

               Conread position:
               920-1116
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               921-1115
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               125, 138
               

               Conread position:
               921-1116
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               84, 70
               

               Conread position:
               921-1116
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               921-1116
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               921-1116
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               921-1116
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               133, 146
               

               Conread position:
               921-1116
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               125, 130
               

               Conread position:
               921-1116
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               124, 130
               

               Conread position:
               921-1116
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               134, 146
               

               Conread position:
               941-1098
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               941-1116
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.