Cow genome map


           Conread name:
           Ss1.1-rpldo0107_n16.5
        

               Conread position:
               228-588
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               233-600
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 83
               

               Conread position:
               249-584
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 32
               

               Conread position:
               254-600
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               319-584
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               187
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               322-600
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               322-600
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               322-600
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               322-600
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               336-599
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               185
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               341-596
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               746-1116
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               242
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               35, 13
               

               Conread position:
               748-1116
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               75, 118
               

               Conread position:
               851-1116
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               81, 85
               

               Conread position:
               859-1105
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               45, 10
               

               Conread position:
               861-1116
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               43, 16
               

               Conread position:
               865-1116
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               34, 5
               

               Conread position:
               887-1116
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               893-1114
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               894-1096
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               903-1092
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               903-1104
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               903-1113
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               903-1113
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               903-1116
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               173, 178
               

               Conread position:
               903-1116
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               903-1116
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               903-1116
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               903-1116
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               903-1116
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               143, 151
               

               Conread position:
               903-1116
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               19, 7
               

               Conread position:
               903-1116
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               152, 156
               

               Conread position:
               903-1116
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               903-1116
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               903-1116
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               903-1116
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               903-1116
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               904-1116
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               912-1116
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               23, 59
               

               Conread position:
               918-1105
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               918-1116
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               128, 134
               

               Conread position:
               918-1116
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               918-1116
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               919-1116
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               921-1116
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               921-1116
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               134, 138
               

               Conread position:
               921-1116
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               33, 43
               

               Conread position:
               921-1116
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               134, 138
               

               Conread position:
               922-1114
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               923-1098
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               930-1114
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               930-1116
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               115, 129
               

               Conread position:
               934-1116
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               935-1115
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               120, 124
               

               Conread position:
               935-1116
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               935-1116
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.