Cow genome map
| Conread name: | Ss1.1-rpldo0107_n16.5 |
| Conread position: | 865-1116 |
| Cow position: | chrX:25325477-25325223 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 892-1116 |
| Cow position: | chrX:25309695-25309918 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 75, 13 |
| Conread position: | 903-1115 |
| Cow position: | chrX:29044941-29044729 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 45, 54 |
| Conread position: | 903-1115 |
| Cow position: | chrX:29045676-29045464 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 903-1116 |
| Cow position: | chrX:25309873-25310086 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 64, 51 |
| Conread position: | 903-1116 |
| Cow position: | chrX:25309957-25310170 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 138, 156 |
| Conread position: | 903-1116 |
| Cow position: | chrX:25310041-25310254 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 47, 67 |
| Conread position: | 903-1116 |
| Cow position: | chrX:25310125-25310338 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 903-1116 |
| Cow position: | chrX:25324932-25324719 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 93, 88 |
| Conread position: | 903-1116 |
| Cow position: | chrX:25325268-25325055 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 152, 165 |
| Conread position: | 904-1116 |
| Cow position: | chrX:25309790-25310002 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 905-1114 |
| Cow position: | chrX:29045107-29044898 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 34, 40 |
| Conread position: | 905-1116 |
| Cow position: | chrX:25324678-25324467 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 905-1116 |
| Cow position: | chrX:29045023-29044812 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 907-1116 |
| Cow position: | chrX:25324592-25324383 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 918-1116 |
| Cow position: | chrX:25324833-25324635 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 918-1116 |
| Cow position: | chrX:25325337-25325139 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 129, 150 |
| Conread position: | 918-1116 |
| Cow position: | chrX:25325589-25325391 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 921-1116 |
| Cow position: | chrX:25310227-25310422 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 138, 133 |
| Conread position: | 921-1116 |
| Cow position: | chrX:29045742-29045547 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.