Cow genome map


           Conread name:
           Ss1.1-rpldo0109_h4.5
        

               Conread position:
               1-453
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               269
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               52, 46
               

               Conread position:
               1-512
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               312
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               219, 204
               

               Conread position:
               1-521
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               317
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               161, 170
               

               Conread position:
               1-533
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               327
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               124, 118
               

               Conread position:
               1-539
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               329
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               39, 68
               

               Conread position:
               1-541
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               331
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               127, 132
               

               Conread position:
               1-541
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               329
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               127, 132
               

               Conread position:
               1-547
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               331
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               182, 207
               

               Conread position:
               1-567
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               341
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               206, 219
               

               Conread position:
               1-570
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               332
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               198, 166
               

               Conread position:
               1-573
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               363
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               140, 146
               

               Conread position:
               1-575
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               342
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               177, 200
               

               Conread position:
               1-575
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               360
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               45, 87
               

               Conread position:
               1-575
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               343
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               121, 143
               

               Conread position:
               1-576
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               353
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               125, 115
               

               Conread position:
               1-576
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 196
               

               Conread position:
               2-529
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               318
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               139, 145
               

               Conread position:
               2-573
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               352
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               126, 131
               

               Conread position:
               3-543
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               337
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               98, 5
               

               Conread position:
               5-541
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               317
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               295, 277
               

               Conread position:
               5-542
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 142
               

               Conread position:
               27-543
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               311
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               100, 89
               

               Conread position:
               29-558
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 87
               

               Conread position:
               52-576
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 70
               

               Conread position:
               74-543
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               290
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               128, 145
               

               Conread position:
               83-573
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               298
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               46, 39
               

               Conread position:
               97-543
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               277
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               86, 102
               

               Conread position:
               104-570
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               279
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               233, 218
               

               Conread position:
               145-573
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               253
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               297, 292
               

               Conread position:
               219-575
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               80, 63
               

               Conread position:
               221-542
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               230-570
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-541
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               65, 51
               

               Conread position:
               269-576
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               290-544
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               314-541
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               72, 76
               

               Conread position:
               314-575
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               127, 123
               

               Conread position:
               338-541
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.