Cow genome map


           Conread name:
           Ss1.1-rpldo0109_h4.5
        

               Conread position:
               1-542
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               334
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               182, 213
               

               Conread position:
               1-558
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 219
               

               Conread position:
               1-575
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               345
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               37, 54
               

               Conread position:
               1-575
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               343
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               125, 79
               

               Conread position:
               1-576
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               294, 285
               

               Conread position:
               2-414
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               259
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               192, 201
               

               Conread position:
               2-573
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               338
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               126, 135
               

               Conread position:
               2-574
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               353
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               216, 195
               

               Conread position:
               5-498
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               304
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               183, 195
               

               Conread position:
               18-541
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               317
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               73, 65
               

               Conread position:
               29-540
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               311
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               25, 13
               

               Conread position:
               40-543
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 7
               

               Conread position:
               61-559
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               296
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               122, 30
               

               Conread position:
               74-575
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               320
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               48, 12
               

               Conread position:
               106-540
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               259
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               22, 16
               

               Conread position:
               144-544
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               246
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               136, 66
               

               Conread position:
               219-573
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               75, 60
               

               Conread position:
               272-573
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               109, 118
               

               Conread position:
               293-573
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               314-575
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               67, 74
               

               Conread position:
               317-542
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               73, 69
               

               Conread position:
               338-575
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               13, 40
               
Show alignments to all cow chromosomes.