Cow genome map
| Conread name: | Ss1.1-rpldo0109_h4.5 |
| Conread position: | 1-542 |
| Cow position: | chr2:78754835-78755375 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 334 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 182, 213 |
| Conread position: | 1-558 |
| Cow position: | chr2:82799865-82800422 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 219 |
| Conread position: | 1-575 |
| Cow position: | chr2:78755003-78755575 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 345 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 37, 54 |
| Conread position: | 1-575 |
| Cow position: | chr2:78755255-78755825 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 343 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 125, 79 |
| Conread position: | 1-576 |
| Cow position: | chr2:82799613-82800188 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 294, 285 |
| Conread position: | 2-414 |
| Cow position: | chr2:82800034-82800446 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 192, 201 |
| Conread position: | 2-573 |
| Cow position: | chr2:5875010-5874439 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 338 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 126, 135 |
| Conread position: | 2-574 |
| Cow position: | chr2:82799782-82800354 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 353 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 216, 195 |
| Conread position: | 5-498 |
| Cow position: | chr2:82799953-82800446 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 304 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 183, 195 |
| Conread position: | 18-541 |
| Cow position: | chr2:86465034-86465557 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 317 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 73, 65 |
| Conread position: | 29-540 |
| Cow position: | chr2:78755783-78756295 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 311 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 25, 13 |
| Conread position: | 40-543 |
| Cow position: | chr2:82799405-82799903 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 7 |
| Conread position: | 61-559 |
| Cow position: | chr2:78755482-78755977 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 296 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 122, 30 |
| Conread position: | 74-575 |
| Cow position: | chr2:78754826-78755325 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 320 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 48, 12 |
| Conread position: | 106-540 |
| Cow position: | chr2:78754202-78754634 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 259 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 22, 16 |
| Conread position: | 144-544 |
| Cow position: | chr2:48689479-48689080 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 246 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 136, 66 |
| Conread position: | 219-573 |
| Cow position: | chr2:82799495-82799849 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 75, 60 |
| Conread position: | 272-573 |
| Cow position: | chr2:5875160-5874859 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 109, 118 |
| Conread position: | 293-573 |
| Cow position: | chr2:82799485-82799765 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 314-575 |
| Cow position: | chr2:78754812-78755073 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 67, 74 |
| Conread position: | 317-542 |
| Cow position: | chr2:48689391-48689166 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 73, 69 |
| Conread position: | 338-575 |
| Cow position: | chr2:48689538-48689301 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 13, 40 |
Show alignments to all cow chromosomes.