Cow genome map
| Conread name: | Ss1.1-rpldo0109_h4.5 |
| Conread position: | 1-344 |
| Cow position: | chr24:17070713-17071056 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 127, 121 |
| Conread position: | 1-498 |
| Cow position: | chr24:17078007-17077510 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 210 |
| Conread position: | 1-543 |
| Cow position: | chr24:17036544-17036002 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 319 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 294, 285 |
| Conread position: | 1-576 |
| Cow position: | chr24:17035704-17035129 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 293, 281 |
| Conread position: | 1-576 |
| Cow position: | chr24:17035956-17035381 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 121 |
| Conread position: | 1-576 |
| Cow position: | chr24:17036208-17035633 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 219 |
| Conread position: | 2-522 |
| Cow position: | chr24:17035451-17034932 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 301 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 219, 195 |
| Conread position: | 2-543 |
| Cow position: | chr24:17036375-17035834 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 274, 264 |
| Conread position: | 2-546 |
| Cow position: | chr24:17036291-17035747 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 331 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 292, 284 |
| Conread position: | 2-574 |
| Cow position: | chr24:17078089-17077518 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 6 |
| Conread position: | 2-575 |
| Cow position: | chr24:17070462-17071035 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 277 |
| Conread position: | 5-515 |
| Cow position: | chr24:17070549-17071059 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 313 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 181, 194 |
| Conread position: | 27-576 |
| Cow position: | chr24:17078149-17077600 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 120 |
| Conread position: | 35-511 |
| Cow position: | chr24:17035502-17035026 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 290 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 91, 76 |
| Conread position: | 59-544 |
| Cow position: | chr24:17035562-17035077 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 152 |
| Conread position: | 83-576 |
| Cow position: | chr24:17036546-17036053 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 311 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 118, 137 |
| Conread position: | 95-576 |
| Cow position: | chr24:17036615-17036137 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 298 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 46, 52 |
| Conread position: | 191-576 |
| Cow position: | chr24:17036603-17036221 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 247 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 220-520 |
| Cow position: | chr24:17013217-17013516 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 199 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 77, 62 |
| Conread position: | 270-539 |
| Cow position: | chr24:17013183-17013452 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 195 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 24, 9 |
| Conread position: | 272-475 |
| Cow position: | chr24:16986451-16986654 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 318-576 |
| Cow position: | chr24:17013147-17013405 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.