Cow genome map

Conread name: Ss1.1-rpldo0109_h4.5

Conread position: 1-340
Cow position:
Alignm length: 342
Alignm identity: 213
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 223, 196

Conread position: 1-343
Cow position:
Alignm length: 346
Alignm identity: 211
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 197, 210

Conread position: 1-497
Cow position:
Alignm length: 501
Alignm identity: 311
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 127, 146

Conread position: 1-507
Cow position:
Alignm length: 514
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 46

Conread position: 1-520
Cow position:
Alignm length: 522
Alignm identity: 307
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 122, 90

Conread position: 1-522
Cow position:
Alignm length: 523
Alignm identity: 308
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 294, 281

Conread position: 1-540
Cow position:
Alignm length: 543
Alignm identity: 313
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 127, 132

Conread position: 1-541
Cow position:
Alignm length: 544
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 115

Conread position: 1-543
Cow position:
Alignm length: 545
Alignm identity: 302
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 124, 115

Conread position: 1-545
Cow position:
Alignm length: 546
Alignm identity: 329
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 126, 34

Conread position: 1-545
Cow position:
Alignm length: 550
Alignm identity: 328
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 130, 146

Conread position: 1-570
Cow position:
Alignm length: 574
Alignm identity: 337
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 204, 212

Conread position: 1-574
Cow position:
Alignm length: 576
Alignm identity: 332
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 297, 281

Conread position: 1-576
Cow position:
Alignm length: 579
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 204

Conread position: 2-377
Cow position:
Alignm length: 380
Alignm identity: 235
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 93, 85

Conread position: 2-426
Cow position:
Alignm length: 427
Alignm identity: 256
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 292, 277

Conread position: 2-574
Cow position:
Alignm length: 579
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 86

Conread position: 2-576
Cow position:
Alignm length: 580
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 131

Conread position: 8-541
Cow position:
Alignm length: 537
Alignm identity: 333
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 120, 60

Conread position: 10-576
Cow position:
Alignm length: 570
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 195

Conread position: 29-574
Cow position:
Alignm length: 550
Alignm identity: 328
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 191, 69

Conread position: 51-536
Cow position:
Alignm length: 488
Alignm identity: 289
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 151, 112

Conread position: 52-540
Cow position:
Alignm length: 493
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 81

Conread position: 53-541
Cow position:
Alignm length: 494
Alignm identity: 312
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 14, 36

Conread position: 53-575
Cow position:
Alignm length: 526
Alignm identity: 310
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 69, 80

Conread position: 59-576
Cow position:
Alignm length: 519
Alignm identity: 311
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 69, 86

Conread position: 62-498
Cow position:
Alignm length: 439
Alignm identity: 259
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 190, 197

Conread position: 82-511
Cow position:
Alignm length: 431
Alignm identity: 267
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 334, 0

Conread position: 94-519
Cow position:
Alignm length: 428
Alignm identity: 234
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 108, 129

Conread position: 104-541
Cow position:
Alignm length: 442
Alignm identity: 265
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 24, 35

Conread position: 126-545
Cow position:
Alignm length: 423
Alignm identity: 271
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 53, 6

Conread position: 167-506
Cow position:
Alignm length: 341
Alignm identity: 209
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 35, 59

Conread position: 221-559
Cow position:
Alignm length: 340
Alignm identity: 215
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 279, 0

Conread position: 226-553
Cow position:
Alignm length: 331
Alignm identity: 212
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 60, 82

Conread position: 230-541
Cow position:
Alignm length: 312
Alignm identity: 198
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 197, 0

Conread position: 246-576
Cow position:
Alignm length: 332
Alignm identity: 205
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 135, 143

Conread position: 249-543
Cow position:
Alignm length: 297
Alignm identity: 185
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 45, 33

Conread position: 259-575
Cow position:
Alignm length: 318
Alignm identity: 205
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 163, 175

Conread position: 272-520
Cow position:
Alignm length: 249
Alignm identity: 166
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 272-575
Cow position:
Alignm length: 306
Alignm identity: 200
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 22, 14

Conread position: 314-534
Cow position:
Alignm length: 223
Alignm identity: 151
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 75, 62

Conread position: 314-576
Cow position:
Alignm length: 265
Alignm identity: 174
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 91, 69

Conread position: 335-576
Cow position:
Alignm length: 243
Alignm identity: 161
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 198, 223

Conread position: 355-575
Cow position:
Alignm length: 221
Alignm identity: 144
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.